RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 SIRT1Q96EB6 747 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 PPP1R9BQ96SB3 815 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 ALKQ9UM73 1620 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 ZNF445P59923 1031 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 C17orf53Q8N3J3 647 aaPredicted RBP18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 ZNF496Q96IT1 587 aaPredicted RBP18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 USP6P35125 1406 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 RIMBP3CA6NJZ7 1639 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 RIMBP3BA6NNM3 1639 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 RIMBP3Q9UFD9 1639 aa18.66■□□□□ 0.58
CCDC85A-201ENST00000407595 CEBPZQ03701 1054 aaKnown RBP18.65■□□□□ 0.58
CCDC85A-201ENST00000407595 TMEM94Q12767 1356 aa18.65■□□□□ 0.58
CCDC85A-201ENST00000407595 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
CCDC85A-201ENST00000407595 A1BGP04217 495 aa18.65■□□□□ 0.58
CCDC85A-201ENST00000407595 USP48Q86UV5 1035 aa18.65■□□□□ 0.58
CCDC85A-201ENST00000407595 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 CCDC83Q8IWF9 413 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 PDCL2Q8N4E4 241 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 STARD3NLO95772 234 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 MCM5P33992 734 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 TBC1D2BQ9UPU7 963 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 HTATSF1O43719 755 aaKnown RBP18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 ATP8B2P98198 1209 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 ZNF790Q6PG37 636 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 LMBR1LQ6UX01 489 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 KSR2Q6VAB6 950 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 SLAIN2Q9P270 581 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 NDUFB9Q9Y6M9 179 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 TULP4Q9NRJ4 1543 aa18.64■□□□□ 0.57
CCDC85A-201ENST00000407595 CASTP20810 708 aaKnown RBP18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 GRM8O00222 908 aa18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 GLRX3O76003 335 aaKnown RBP18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 LETM1O95202 739 aaPredicted RBP18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 TPD52L1Q16890 204 aaPredicted RBP18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 PROSER3Q2NL68 480 aa18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 TTC39AQ5SRH9 613 aa18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 NOLC1Q14978 699 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 SF3A1Q15459 793 aaKnown RBP18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 PPP4R3BQ5MIZ7 849 aa18.63■□□□□ 0.57
CCDC85A-201ENST00000407595 G3V3G9 751 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 IGSF3O75054 1194 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 CCDC192P0DO97 292 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 DCAF8Q5TAQ9 597 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 CPLX1O14810 134 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 IDH1O75874 414 aaKnown RBP18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 HS1BP3Q53T59 392 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 CCDC183Q5T5S1 534 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 MPHOSPH8Q99549 860 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 TRMT112Q9UI30 125 aaKnown RBP18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 CNPY2Q9Y2B0 182 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 AXIN2Q9Y2T1 843 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 GPT2Q8TD30 523 aa18.62■□□□□ 0.57
CCDC85A-201ENST00000407595 LARP1BQ659C4 914 aaKnown RBP18.61■□□□□ 0.57
CCDC85A-201ENST00000407595 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
CCDC85A-201ENST00000407595 METTL24Q5JXM2 366 aa18.6■□□□□ 0.57
CCDC85A-201ENST00000407595 ECHDC1Q9NTX5 307 aa18.6■□□□□ 0.57
CCDC85A-201ENST00000407595 FAM135BQ49AJ0 1406 aa18.6■□□□□ 0.57
CCDC85A-201ENST00000407595 RAD21O60216 631 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 CCDC158Q5M9N0 1113 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 RALYLQ86SE5 291 aaKnown RBP18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 SIRT2Q8IXJ6 389 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 CKAP2LQ8IYA6 745 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 DDX11Q96FC9 970 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 PODXL2Q9NZ53 605 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 IL2RBP14784 551 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 TRDNQ13061 729 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 NFXL1Q6ZNB6 911 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 C8orf37Q96NL8 207 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
CCDC85A-201ENST00000407595 BICC1Q9H694 974 aaKnown RBP18.58■□□□□ 0.57
CCDC85A-201ENST00000407595 CYP46A1Q9Y6A2 500 aa18.58■□□□□ 0.57
CCDC85A-201ENST00000407595 GOLIM4O00461 696 aa18.58■□□□□ 0.57
CCDC85A-201ENST00000407595 GADD45BO75293 160 aaPredicted RBP18.58■□□□□ 0.57
CCDC85A-201ENST00000407595 ATP2B1P20020 1258 aa18.58■□□□□ 0.57
CCDC85A-201ENST00000407595 ARHGEF25Q86VW2 580 aa18.58■□□□□ 0.57
CCDC85A-201ENST00000407595 TNMDQ9H2S6 317 aa18.58■□□□□ 0.57
CCDC85A-201ENST00000407595 IQSEC3Q9UPP2 1182 aaPredicted RBP18.58■□□□□ 0.57
CCDC85A-201ENST00000407595 UBAP1LF5GYI3 381 aa18.58■□□□□ 0.56
CCDC85A-201ENST00000407595 CPA1P15085 419 aa18.58■□□□□ 0.56
CCDC85A-201ENST00000407595 ABCF2Q9UG63 623 aa18.58■□□□□ 0.56
CCDC85A-201ENST00000407595 RAB11FIP3O75154 756 aa18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 LINS1Q8NG48 757 aa18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 NSFL1CQ9UNZ2 370 aaKnown RBP18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 HELBQ8NG08 1087 aaPredicted RBP18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 PDRG1Q9NUG6 133 aa18.57■□□□□ 0.56
CCDC85A-201ENST00000407595 STX6O43752 255 aa18.56■□□□□ 0.56
CCDC85A-201ENST00000407595 KRT85P78386 507 aa18.56■□□□□ 0.56
CCDC85A-201ENST00000407595 RAB11FIP4Q86YS3 637 aa18.56■□□□□ 0.56
CCDC85A-201ENST00000407595 KIF2CQ99661 725 aa18.56■□□□□ 0.56
CCDC85A-201ENST00000407595 TFIP11Q9UBB9 837 aaKnown RBP18.56■□□□□ 0.56
CCDC85A-201ENST00000407595 ATP7BP35670 1465 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms