RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.42■□□□□ 0.865e-6■□□□□ 10.1
NUP50-203ENST00000407019 MEGF6O75095 1541 aa20.42■□□□□ 0.86
NUP50-203ENST00000407019 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
NUP50-203ENST00000407019 SUCLG2Q96I99 432 aa20.42■□□□□ 0.86
NUP50-203ENST00000407019 C5P01031 1676 aa20.42■□□□□ 0.86
NUP50-203ENST00000407019 UPF3BQ9BZI7 483 aaKnown RBP20.41■□□□□ 0.86
NUP50-203ENST00000407019 ECHDC1Q9NTX5 307 aa20.41■□□□□ 0.86
NUP50-203ENST00000407019 PA2G4Q9UQ80 394 aaKnown RBP20.41■□□□□ 0.86
NUP50-203ENST00000407019 DDX17Q92841 729 aaKnown RBP20.41■□□□□ 0.86
NUP50-203ENST00000407019 COL18A1P39060 1754 aa20.4■□□□□ 0.86
NUP50-203ENST00000407019 PLEKHG2Q9H7P9 1386 aa20.4■□□□□ 0.86
NUP50-203ENST00000407019 IFIT2P09913 472 aaKnown RBP20.4■□□□□ 0.86
NUP50-203ENST00000407019 CSB-PGBD3P0DP91 1061 aa20.4■□□□□ 0.86
NUP50-203ENST00000407019 NOL8Q76FK4 1167 aaKnown RBP20.4■□□□□ 0.86
NUP50-203ENST00000407019 RIC3Q7Z5B4 369 aa20.4■□□□□ 0.86
NUP50-203ENST00000407019 IFNL2Q8IZJ0 200 aa20.4■□□□□ 0.86
NUP50-203ENST00000407019 LSG1Q9H089 658 aaKnown RBP20.4■□□□□ 0.86
NUP50-203ENST00000407019 LARP1Q6PKG0 1096 aaKnown RBP20.39■□□□□ 0.86
NUP50-203ENST00000407019 KIAA1211Q6ZU35 1233 aa20.39■□□□□ 0.86
NUP50-203ENST00000407019 NFATC2IPQ8NCF5 419 aa20.39■□□□□ 0.85
NUP50-203ENST00000407019 KAZALD1Q96I82 304 aa20.39■□□□□ 0.85
NUP50-203ENST00000407019 BICC1Q9H694 974 aaKnown RBP20.39■□□□□ 0.85
NUP50-203ENST00000407019 DIAPH3Q9NSV4 1193 aa20.39■□□□□ 0.85
NUP50-203ENST00000407019 TNS3Q68CZ2 1445 aa20.39■□□□□ 0.85
NUP50-203ENST00000407019 CWC27Q6UX04 472 aaKnown RBP20.38■□□□□ 0.85
NUP50-203ENST00000407019 RUFY2Q8WXA3 655 aa20.38■□□□□ 0.85
NUP50-203ENST00000407019 MRC1P22897 1456 aa20.38■□□□□ 0.85
NUP50-203ENST00000407019 BRD1O95696 1058 aa20.38■□□□□ 0.85
NUP50-203ENST00000407019 IGKV5-2P06315 115 aa20.38■□□□□ 0.85
NUP50-203ENST00000407019 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
NUP50-203ENST00000407019 SNX14Q9Y5W7 946 aa20.38■□□□□ 0.85
NUP50-203ENST00000407019 MYL6BP14649 208 aa20.37■□□□□ 0.85
NUP50-203ENST00000407019 AACSQ86V21 672 aa20.37■□□□□ 0.85
NUP50-203ENST00000407019 STRCP1A6NGW2 1772 aa20.36■□□□□ 0.85
NUP50-203ENST00000407019 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
NUP50-203ENST00000407019 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.85
NUP50-203ENST00000407019 XAGE3Q8WTP9 111 aa20.36■□□□□ 0.85
NUP50-203ENST00000407019 NEURL1BA8MQ27 555 aa20.36■□□□□ 0.85
NUP50-203ENST00000407019 PRPF40AO75400 957 aaKnown RBP20.36■□□□□ 0.85
NUP50-203ENST00000407019 CABLES1Q8TDN4 633 aa20.36■□□□□ 0.85
NUP50-203ENST00000407019 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
NUP50-203ENST00000407019 DCAF5Q96JK2 942 aa20.36■□□□□ 0.85
NUP50-203ENST00000407019 CAVIN1Q6NZI2 390 aaKnown RBP20.35■□□□□ 0.85
NUP50-203ENST00000407019 CADPS2Q86UW7 1296 aa20.35■□□□□ 0.85
NUP50-203ENST00000407019 TTC5Q8N0Z6 440 aa20.35■□□□□ 0.85
NUP50-203ENST00000407019 EVI5LQ96CN4 794 aa20.35■□□□□ 0.85
NUP50-203ENST00000407019 SASH1O94885 1247 aa20.34■□□□□ 0.85
NUP50-203ENST00000407019 ZNF445P59923 1031 aa20.34■□□□□ 0.85
NUP50-203ENST00000407019 CHRNA2Q15822 529 aa20.34■□□□□ 0.85
NUP50-203ENST00000407019 COPS6Q7L5N1 327 aa20.34■□□□□ 0.85
NUP50-203ENST00000407019 METTL22Q9BUU2 404 aaPredicted RBP20.34■□□□□ 0.85
NUP50-203ENST00000407019 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
NUP50-203ENST00000407019 FOXD4L5Q5VV16 416 aaPredicted RBP20.34■□□□□ 0.85
NUP50-203ENST00000407019 FOXD4L4Q8WXT5 416 aaPredicted RBP20.34■□□□□ 0.85
NUP50-203ENST00000407019 MYD88Q99836 296 aa20.34■□□□□ 0.85
NUP50-203ENST00000407019 RRAGDQ9NQL2 400 aaPredicted RBP20.34■□□□□ 0.85
NUP50-203ENST00000407019 PKD1L3Q7Z443 1732 aa20.34■□□□□ 0.85
NUP50-203ENST00000407019 GCKRQ14397 625 aa20.33■□□□□ 0.85
NUP50-203ENST00000407019 CYP27B1O15528 508 aa20.33■□□□□ 0.84
NUP50-203ENST00000407019 ZSCAN23Q3MJ62 389 aa20.33■□□□□ 0.84
NUP50-203ENST00000407019 RASEFQ8IZ41 740 aa20.33■□□□□ 0.84
NUP50-203ENST00000407019 TTC14Q96N46 770 aa20.33■□□□□ 0.84
NUP50-203ENST00000407019 SPATA31A3Q5VYP0 1347 aa20.32■□□□□ 0.84
NUP50-203ENST00000407019 GPT2Q8TD30 523 aa20.32■□□□□ 0.84
NUP50-203ENST00000407019 EAF2Q96CJ1 260 aaPredicted RBP20.32■□□□□ 0.84
NUP50-203ENST00000407019 FMNL2Q96PY5 1086 aa20.32■□□□□ 0.84
NUP50-203ENST00000407019 CPDO75976 1380 aa20.32■□□□□ 0.84
NUP50-203ENST00000407019 ANKRD13DQ6ZTN6 518 aa20.31■□□□□ 0.84
NUP50-203ENST00000407019 LRP10Q7Z4F1 713 aa20.31■□□□□ 0.84
NUP50-203ENST00000407019 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
NUP50-203ENST00000407019 HIP1O00291 1037 aa20.3■□□□□ 0.84
NUP50-203ENST00000407019 CHAMP1Q96JM3 812 aa20.3■□□□□ 0.84
NUP50-203ENST00000407019 SIL1Q9H173 461 aa20.3■□□□□ 0.84
NUP50-203ENST00000407019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.3■□□□□ 0.84
NUP50-203ENST00000407019 AK2P54819 239 aa20.3■□□□□ 0.84
NUP50-203ENST00000407019 CCDC8Q9H0W5 538 aaPredicted RBP20.3■□□□□ 0.84
NUP50-203ENST00000407019 NASPP49321 788 aaPredicted RBP20.29■□□□□ 0.84
NUP50-203ENST00000407019 CABP4P57796 275 aa20.29■□□□□ 0.84
NUP50-203ENST00000407019 PTH1RQ03431 593 aa20.29■□□□□ 0.84
NUP50-203ENST00000407019 LIMCH1Q9UPQ0 1083 aa20.29■□□□□ 0.84
NUP50-203ENST00000407019 WDR33Q9C0J8 1336 aaKnown RBP20.29■□□□□ 0.84
NUP50-203ENST00000407019 MBD3O95983 291 aa20.28■□□□□ 0.84
NUP50-203ENST00000407019 PARP4Q9UKK3 1724 aaKnown RBP20.28■□□□□ 0.84
NUP50-203ENST00000407019 CASTP20810 708 aaKnown RBP20.28■□□□□ 0.84
NUP50-203ENST00000407019 EPHA10Q5JZY3 1008 aa20.28■□□□□ 0.84
NUP50-203ENST00000407019 TLR7Q9NYK1 1049 aaKnown RBP20.28■□□□□ 0.84
NUP50-203ENST00000407019 CCDC171Q6TFL3 1326 aa20.27■□□□□ 0.84
NUP50-203ENST00000407019 KCNB2Q92953 911 aa20.27■□□□□ 0.84
NUP50-203ENST00000407019 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
NUP50-203ENST00000407019 RUFY3Q7L099 469 aa20.26■□□□□ 0.83
NUP50-203ENST00000407019 KLHDC4Q8TBB5 520 aa20.26■□□□□ 0.83
NUP50-203ENST00000407019 RBM27Q9P2N5 1060 aaKnown RBP20.26■□□□□ 0.83
NUP50-203ENST00000407019 RPAP1Q9BWH6 1393 aaPredicted RBP20.26■□□□□ 0.83
NUP50-203ENST00000407019 LAMB4A4D0S4 1761 aa20.26■□□□□ 0.83
NUP50-203ENST00000407019 PIP4K2AP48426 406 aaPredicted RBP20.26■□□□□ 0.83
NUP50-203ENST00000407019 CCDC173Q0VFZ6 552 aa20.26■□□□□ 0.83
NUP50-203ENST00000407019 TRIM44Q96DX7 344 aaPredicted RBP20.26■□□□□ 0.83
NUP50-203ENST00000407019 TM6SF1Q9BZW5 370 aa20.26■□□□□ 0.83
NUP50-203ENST00000407019 COL15A1P39059 1388 aa20.26■□□□□ 0.83
NUP50-203ENST00000407019 GLI3P10071 1580 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms