RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CNTNAP1P78357 1384 aa8.44□□□□□ -1.06
RPA3-204ENST00000406109 PDE4DIPQ5VU43 2346 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 UBR2Q8IWV8 1755 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 DDNO94850 711 aaPredicted RBP8.43□□□□□ -1.06
RPA3-204ENST00000406109 ERFEQ4G0M1 354 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 TBC1D9BQ66K14 1250 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 PRR5LQ6MZQ0 368 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 DPY19L2Q6NUT2 758 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 VSIG10Q8N0Z9 540 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 CCDC24Q8N4L8 307 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 BRIP1Q9BX63 1249 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 PRDM10Q9NQV6 1147 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 LTBP3Q9NS15 1303 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 BRCA2P51587 3418 aa8.43□□□□□ -1.06
RPA3-204ENST00000406109 SLC34A2O95436 690 aa8.42□□□□□ -1.06
RPA3-204ENST00000406109 ITGBL1O95965 494 aaPredicted RBP8.42□□□□□ -1.06
RPA3-204ENST00000406109 VEGFBP49765 207 aa8.42□□□□□ -1.06
RPA3-204ENST00000406109 BICDL1Q6ZP65 573 aa8.42□□□□□ -1.06
RPA3-204ENST00000406109 C7orf43Q8WVR3 580 aa8.42□□□□□ -1.06
RPA3-204ENST00000406109 ZNF622Q969S3 477 aaKnown RBP eCLIP8.42□□□□□ -1.06
RPA3-204ENST00000406109 SCN4AP35499 1836 aa8.41□□□□□ -1.06
RPA3-204ENST00000406109 CANXP27824 592 aaKnown RBP8.41□□□□□ -1.06
RPA3-204ENST00000406109 ZEB1P37275 1124 aaPredicted RBP8.41□□□□□ -1.06
RPA3-204ENST00000406109 MTHFSDQ2M296 383 aaKnown RBP8.41□□□□□ -1.06
RPA3-204ENST00000406109 MORC1Q86VD1 984 aa8.41□□□□□ -1.06
RPA3-204ENST00000406109 L3MBTL3Q96JM7 780 aaPredicted RBP8.41□□□□□ -1.06
RPA3-204ENST00000406109 TAOK3Q9H2K8 898 aa8.41□□□□□ -1.06
RPA3-204ENST00000406109 WBP1LQ9NX94 342 aa8.41□□□□□ -1.06
RPA3-204ENST00000406109 CACNA1SQ13698 1873 aa8.4□□□□□ -1.06
RPA3-204ENST00000406109 SRGNP10124 158 aa8.4□□□□□ -1.06
RPA3-204ENST00000406109 CD44P16070 742 aaKnown RBP8.4□□□□□ -1.06
RPA3-204ENST00000406109 PDE6BP35913 854 aa8.4□□□□□ -1.06
RPA3-204ENST00000406109 PRPF40BQ6NWY9 871 aaKnown RBP8.4□□□□□ -1.06
RPA3-204ENST00000406109 ZNF496Q96IT1 587 aaPredicted RBP8.4□□□□□ -1.06
RPA3-204ENST00000406109 TAF1DQ9H5J8 278 aaPredicted RBP8.4□□□□□ -1.06
RPA3-204ENST00000406109 PDZRN3Q9UPQ7 1066 aa8.4□□□□□ -1.06
RPA3-204ENST00000406109 TBC1D2BQ9UPU7 963 aa8.4□□□□□ -1.06
RPA3-204ENST00000406109 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.06
RPA3-204ENST00000406109 ADAMTSL1Q8N6G6 1762 aa8.4□□□□□ -1.07
RPA3-204ENST00000406109 SCN7AQ01118 1682 aa8.4□□□□□ -1.07
RPA3-204ENST00000406109 HTTP42858 3142 aa8.39□□□□□ -1.07
RPA3-204ENST00000406109 KIF7Q2M1P5 1343 aa8.39□□□□□ -1.07
RPA3-204ENST00000406109 CAMTA2O94983 1202 aa8.39□□□□□ -1.07
RPA3-204ENST00000406109 STARD3NLO95772 234 aa8.39□□□□□ -1.07
RPA3-204ENST00000406109 HMOX1P09601 288 aa8.39□□□□□ -1.07
RPA3-204ENST00000406109 CTCFP49711 727 aaPredicted RBP8.39□□□□□ -1.07
RPA3-204ENST00000406109 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
RPA3-204ENST00000406109 LDHDQ86WU2 507 aa8.39□□□□□ -1.07
RPA3-204ENST00000406109 ARFGEF2Q9Y6D5 1785 aa8.39□□□□□ -1.07
RPA3-204ENST00000406109 A0A0C4DFX4 3053 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 ZNF541Q9H0D2 1346 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 A0A087WZG4 1122 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 TMEM88BA6NKF7 163 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 LBX1P52954 281 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 STYK1Q6J9G0 422 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 IL17REQ8NFR9 667 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 CNKSR1Q969H4 720 aa8.38□□□□□ -1.07
RPA3-204ENST00000406109 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
RPA3-204ENST00000406109 HEG1Q9ULI3 1381 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 KLRG2A4D1S0 409 aaPredicted RBP8.37□□□□□ -1.07
RPA3-204ENST00000406109 IQCA1LA6NCM1 817 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 A1BGP04217 495 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 HSPA8P11142 646 aaKnown RBP8.37□□□□□ -1.07
RPA3-204ENST00000406109 IL6STP40189 918 aaPredicted RBP8.37□□□□□ -1.07
RPA3-204ENST00000406109 ZNF790Q6PG37 636 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 CNBD1Q8NA66 436 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 MASTLQ96GX5 879 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 ABHD8Q96I13 439 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 SETDB2Q96T68 719 aa8.37□□□□□ -1.07
RPA3-204ENST00000406109 BCORQ6W2J9 1755 aa8.36□□□□□ -1.07
RPA3-204ENST00000406109 KCNQ3O43525 872 aa8.36□□□□□ -1.07
RPA3-204ENST00000406109 CNGB1Q14028 1251 aaPredicted RBP8.36□□□□□ -1.07
RPA3-204ENST00000406109 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
RPA3-204ENST00000406109 ZNF277Q9NRM2 450 aaPredicted RBP8.36□□□□□ -1.07
RPA3-204ENST00000406109 KNSTRNQ9Y448 316 aa8.36□□□□□ -1.07
RPA3-204ENST00000406109 SZT2Q5T011 3432 aa8.36□□□□□ -1.07
RPA3-204ENST00000406109 SNED1Q8TER0 1413 aa8.36□□□□□ -1.07
RPA3-204ENST00000406109 FZD9O00144 591 aa8.35□□□□□ -1.07
RPA3-204ENST00000406109 FKBP4Q02790 459 aaKnown RBP eCLIP8.35□□□□□ -1.07
RPA3-204ENST00000406109 DEFB115Q30KQ5 88 aa8.35□□□□□ -1.07
RPA3-204ENST00000406109 EAPPQ56P03 285 aaPredicted RBP8.35□□□□□ -1.07
RPA3-204ENST00000406109 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
RPA3-204ENST00000406109 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
RPA3-204ENST00000406109 TTC5Q8N0Z6 440 aa8.35□□□□□ -1.07
RPA3-204ENST00000406109 CNTROBQ8N137 903 aa8.35□□□□□ -1.07
RPA3-204ENST00000406109 AIDAQ96BJ3 306 aa8.35□□□□□ -1.07
RPA3-204ENST00000406109 TEX13AQ9BXU3 409 aaPredicted RBP8.35□□□□□ -1.07
RPA3-204ENST00000406109 HACL1Q9UJ83 578 aa8.35□□□□□ -1.07
RPA3-204ENST00000406109 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
RPA3-204ENST00000406109 CEMIPQ8WUJ3 1361 aa8.35□□□□□ -1.07
RPA3-204ENST00000406109 RNF123Q5XPI4 1314 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 WDR33Q9C0J8 1336 aaKnown RBP8.34□□□□□ -1.07
RPA3-204ENST00000406109 COL4A5P29400 1685 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 PRAMEF22A3QJZ6 481 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 EPHX2P34913 555 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
RPA3-204ENST00000406109 RGS19P49795 217 aa8.34□□□□□ -1.07
RPA3-204ENST00000406109 ST5P78524 1137 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms