RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 ZNF385CQ66K41 422 aaPredicted RBP6.77□□□□□ -1.33
RPA3-203ENST00000401447 CLP1Q92989 425 aaKnown RBP6.77□□□□□ -1.33
RPA3-203ENST00000401447 HCN4Q9Y3Q4 1203 aa6.77□□□□□ -1.33
RPA3-203ENST00000401447 RB1CC1Q8TDY2 1594 aa6.77□□□□□ -1.33
RPA3-203ENST00000401447 ALDH16A1Q8IZ83 802 aa6.76□□□□□ -1.33
RPA3-203ENST00000401447 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
RPA3-203ENST00000401447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.76□□□□□ -1.33
RPA3-203ENST00000401447 RASSF7Q02833 373 aa6.75□□□□□ -1.33
RPA3-203ENST00000401447 FAM69CQ0P6D2 419 aa6.75□□□□□ -1.33
RPA3-203ENST00000401447 RTN1Q16799 776 aa6.75□□□□□ -1.33
RPA3-203ENST00000401447 KCTD17Q8N5Z5 321 aa6.75□□□□□ -1.33
RPA3-203ENST00000401447 ZIC5Q96T25 663 aa6.75□□□□□ -1.33
RPA3-203ENST00000401447 ANKIB1Q9P2G1 1089 aa6.75□□□□□ -1.33
RPA3-203ENST00000401447 ATXN7L1Q9ULK2 861 aaPredicted RBP6.75□□□□□ -1.33
RPA3-203ENST00000401447 NSFL1CQ9UNZ2 370 aaKnown RBP6.75□□□□□ -1.33
RPA3-203ENST00000401447 ATXN7O15265 892 aaPredicted RBP6.74□□□□□ -1.33
RPA3-203ENST00000401447 ARHGEF15O94989 841 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 THBS1P07996 1170 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 ATP2B4P23634 1241 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 FKBP5Q13451 457 aaPredicted RBP6.74□□□□□ -1.33
RPA3-203ENST00000401447 SUZ12Q15022 739 aaKnown RBP6.74□□□□□ -1.33
RPA3-203ENST00000401447 OCLNQ16625 522 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 LRRC69Q6ZNQ3 347 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 TMEM151AQ8N4L1 468 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 WHAMMQ8TF30 809 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 ZCCHC2Q9C0B9 1178 aaKnown RBP6.74□□□□□ -1.33
RPA3-203ENST00000401447 CXXC1Q9P0U4 656 aaPredicted RBP6.74□□□□□ -1.33
RPA3-203ENST00000401447 USTQ9Y2C2 406 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 PCDHGC4Q9Y5F7 938 aa6.74□□□□□ -1.33
RPA3-203ENST00000401447 DCDC2BA2VCK2 349 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 PTCD1O75127 700 aaKnown RBP6.73□□□□□ -1.33
RPA3-203ENST00000401447 GDF11O95390 407 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 FAM157BP0CG42 384 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 MX2P20592 715 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 GAS6Q14393 721 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 SAMD5Q5TGI4 173 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 ABHD17AQ96GS6 310 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 MKNK1Q9BUB5 465 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 CFHR5Q9BXR6 569 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 MBIPQ9NS73 344 aa6.73□□□□□ -1.33
RPA3-203ENST00000401447 RNF225M0QZC1 329 aaPredicted RBP6.72□□□□□ -1.33
RPA3-203ENST00000401447 KHNYNO15037 678 aaKnown RBP6.72□□□□□ -1.33
RPA3-203ENST00000401447 UBAP2LQ14157 1087 aaKnown RBP6.72□□□□□ -1.33
RPA3-203ENST00000401447 SVOPQ8N4V2 548 aa6.72□□□□□ -1.33
RPA3-203ENST00000401447 HSH2DQ96JZ2 352 aa6.72□□□□□ -1.33
RPA3-203ENST00000401447 TMEM88BA6NKF7 163 aa6.71□□□□□ -1.34
RPA3-203ENST00000401447 BNIP3LO60238 219 aa6.71□□□□□ -1.34
RPA3-203ENST00000401447 FGFR3P22607 806 aa6.71□□□□□ -1.34
RPA3-203ENST00000401447 PDE4CQ08493 712 aa6.71□□□□□ -1.34
RPA3-203ENST00000401447 B4GALNT3Q6L9W6 998 aa6.71□□□□□ -1.34
RPA3-203ENST00000401447 SUSD3Q96L08 255 aa6.71□□□□□ -1.34
RPA3-203ENST00000401447 QTRT2Q9H974 415 aaKnown RBP6.71□□□□□ -1.34
RPA3-203ENST00000401447 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
RPA3-203ENST00000401447 BMP4P12644 408 aa6.7□□□□□ -1.34
RPA3-203ENST00000401447 MAP2K3P46734 347 aa6.7□□□□□ -1.34
RPA3-203ENST00000401447 SRSF11Q05519 484 aaKnown RBP6.7□□□□□ -1.34
RPA3-203ENST00000401447 DGKZQ13574 1117 aa6.7□□□□□ -1.34
RPA3-203ENST00000401447 COL26A1Q96A83 441 aa6.7□□□□□ -1.34
RPA3-203ENST00000401447 MYO19Q96H55 970 aa6.7□□□□□ -1.34
RPA3-203ENST00000401447 CEP63Q96MT8 703 aa6.7□□□□□ -1.34
RPA3-203ENST00000401447 NDFIP2Q9NV92 336 aa6.7□□□□□ -1.34
RPA3-203ENST00000401447 TGFBR3LH3BV60 316 aa6.69□□□□□ -1.34
RPA3-203ENST00000401447 ADAMTS2O95450 1211 aa6.69□□□□□ -1.34
RPA3-203ENST00000401447 LAMC2Q13753 1193 aa6.69□□□□□ -1.34
RPA3-203ENST00000401447 IER5Q5VY09 327 aa6.69□□□□□ -1.34
RPA3-203ENST00000401447 C16orf46Q6P387 395 aa6.69□□□□□ -1.34
RPA3-203ENST00000401447 RETREG2Q8NC44 543 aa6.69□□□□□ -1.34
RPA3-203ENST00000401447 IGF1RP08069 1367 aa6.69□□□□□ -1.34
RPA3-203ENST00000401447 CD33P20138 364 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 TNP2Q05952 138 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 TYRO3Q06418 890 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 BTLAQ7Z6A9 289 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 ZNF280CQ8ND82 737 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 C7orf43Q8WVR3 580 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 BRD7Q9NPI1 651 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 KLK14Q9P0G3 267 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 MTMR7Q9Y216 660 aa6.68□□□□□ -1.34
RPA3-203ENST00000401447 CECR2Q9BXF3 1484 aa6.67□□□□□ -1.34
RPA3-203ENST00000401447 EFSO43281 561 aa6.67□□□□□ -1.34
RPA3-203ENST00000401447 EPB42P16452 691 aa6.67□□□□□ -1.34
RPA3-203ENST00000401447 C11orf91Q3C1V1 193 aa6.67□□□□□ -1.34
RPA3-203ENST00000401447 LYPD4Q6UWN0 246 aa6.67□□□□□ -1.34
RPA3-203ENST00000401447 MARK1Q9P0L2 795 aa6.67□□□□□ -1.34
RPA3-203ENST00000401447 SLAIN2Q9P270 581 aa6.67□□□□□ -1.34
RPA3-203ENST00000401447 SSFA2P28290 1259 aa6.66□□□□□ -1.34
RPA3-203ENST00000401447 MAP3K10Q02779 954 aa6.66□□□□□ -1.34
RPA3-203ENST00000401447 NAA30Q147X3 362 aaPredicted RBP6.66□□□□□ -1.34
RPA3-203ENST00000401447 COX20Q5RI15 118 aa6.66□□□□□ -1.34
RPA3-203ENST00000401447 FAM182BQ5T319 152 aa6.66□□□□□ -1.34
RPA3-203ENST00000401447 KLRG1Q96E93 195 aa6.66□□□□□ -1.34
RPA3-203ENST00000401447 PRR12Q9ULL5 1215 aa6.66□□□□□ -1.34
RPA3-203ENST00000401447 DNMT3AQ9Y6K1 912 aaPredicted RBP6.66□□□□□ -1.34
RPA3-203ENST00000401447 CARNS1A5YM72 827 aa6.65□□□□□ -1.34
RPA3-203ENST00000401447 CTBSQ01459 385 aa6.65□□□□□ -1.34
RPA3-203ENST00000401447 NEUROD1Q13562 356 aa6.65□□□□□ -1.34
RPA3-203ENST00000401447 KANK3Q6NY19 840 aa6.65□□□□□ -1.34
RPA3-203ENST00000401447 IFT43Q96FT9 208 aa6.65□□□□□ -1.34
RPA3-203ENST00000401447 OXCT2Q9BYC2 517 aaPredicted RBP6.65□□□□□ -1.34
RPA3-203ENST00000401447 GDF2Q9UK05 429 aaPredicted RBP6.65□□□□□ -1.34
RPA3-203ENST00000401447 LRFN2Q9ULH4 789 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms