RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ASAP1Q9ULH1 1129 aa15.85■□□□□ 0.13
SMIM11A-201ENST00000399292 PCDHGA10Q9Y5H3 936 aa15.84■□□□□ 0.13
SMIM11A-201ENST00000399292 PAPPAQ13219 1627 aa15.83■□□□□ 0.13
SMIM11A-201ENST00000399292 LOC102724428A0A0B4J2F2 783 aa15.83■□□□□ 0.12
SMIM11A-201ENST00000399292 SIK1P57059 783 aa15.83■□□□□ 0.12
SMIM11A-201ENST00000399292 CABP4P57796 275 aa15.83■□□□□ 0.12
SMIM11A-201ENST00000399292 ATG3Q9NT62 314 aa15.83■□□□□ 0.12
SMIM11A-201ENST00000399292 PNPLA7Q6ZV29 1317 aa15.83■□□□□ 0.12
SMIM11A-201ENST00000399292 BHMG1C9JSJ3 638 aaPredicted RBP15.82■□□□□ 0.12
SMIM11A-201ENST00000399292 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
SMIM11A-201ENST00000399292 CFAP53Q96M91 514 aa15.82■□□□□ 0.12
SMIM11A-201ENST00000399292 CASZ1Q86V15 1759 aa15.82■□□□□ 0.12
SMIM11A-201ENST00000399292 LY75O60449 1722 aa15.81■□□□□ 0.12
SMIM11A-201ENST00000399292 AKAP4Q5JQC9 854 aa15.81■□□□□ 0.12
SMIM11A-201ENST00000399292 FLAD1Q8NFF5 587 aa15.81■□□□□ 0.12
SMIM11A-201ENST00000399292 PLA2G2EQ9NZK7 142 aa15.81■□□□□ 0.12
SMIM11A-201ENST00000399292 PHF14O94880 888 aa15.8■□□□□ 0.12
SMIM11A-201ENST00000399292 ATP6V1AP38606 617 aa15.8■□□□□ 0.12
SMIM11A-201ENST00000399292 COL23A1Q86Y22 540 aaPredicted RBP15.8■□□□□ 0.12
SMIM11A-201ENST00000399292 NFATC2IPQ8NCF5 419 aa15.8■□□□□ 0.12
SMIM11A-201ENST00000399292 SPRYD3Q8NCJ5 442 aa15.8■□□□□ 0.12
SMIM11A-201ENST00000399292 ARXQ96QS3 562 aa15.8■□□□□ 0.12
SMIM11A-201ENST00000399292 TOGARAM1Q9Y4F4 1720 aa15.8■□□□□ 0.12
SMIM11A-201ENST00000399292 POLD1P28340 1107 aa15.79■□□□□ 0.12
SMIM11A-201ENST00000399292 PPP2R1AP30153 589 aa15.79■□□□□ 0.12
SMIM11A-201ENST00000399292 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
SMIM11A-201ENST00000399292 AK7Q96M32 723 aa15.79■□□□□ 0.12
SMIM11A-201ENST00000399292 MTHFSDQ2M296 383 aaKnown RBP15.78■□□□□ 0.12
SMIM11A-201ENST00000399292 TYW1BQ6NUM6 668 aa15.78■□□□□ 0.12
SMIM11A-201ENST00000399292 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
SMIM11A-201ENST00000399292 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
SMIM11A-201ENST00000399292 PPP1R3GB7ZBB8 358 aa15.77■□□□□ 0.12
SMIM11A-201ENST00000399292 DPYSL4O14531 572 aa15.77■□□□□ 0.12
SMIM11A-201ENST00000399292 ITPK1Q13572 414 aa15.77■□□□□ 0.12
SMIM11A-201ENST00000399292 LINC00116Q8NCU8 138 aa15.77■□□□□ 0.12
SMIM11A-201ENST00000399292 FHDC1Q9C0D6 1143 aaPredicted RBP15.77■□□□□ 0.12
SMIM11A-201ENST00000399292 LGR6Q9HBX8 967 aa15.77■□□□□ 0.12
SMIM11A-201ENST00000399292 RTN4Q9NQC3 1192 aaKnown RBP15.77■□□□□ 0.12
SMIM11A-201ENST00000399292 ITGB4P16144 1822 aa15.77■□□□□ 0.11
SMIM11A-201ENST00000399292 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.11
SMIM11A-201ENST00000399292 SYT17Q9BSW7 474 aa15.76■□□□□ 0.11
SMIM11A-201ENST00000399292 RNMTO43148 476 aaKnown RBP15.75■□□□□ 0.11
SMIM11A-201ENST00000399292 COL3A1P02461 1466 aaPredicted RBP15.74■□□□□ 0.11
SMIM11A-201ENST00000399292 PTCD1O75127 700 aaKnown RBP15.74■□□□□ 0.11
SMIM11A-201ENST00000399292 GAS2L2Q8NHY3 880 aa15.74■□□□□ 0.11
SMIM11A-201ENST00000399292 SLC4A9Q96Q91 983 aa15.74■□□□□ 0.11
SMIM11A-201ENST00000399292 SLC52A2Q9HAB3 445 aa15.74■□□□□ 0.11
SMIM11A-201ENST00000399292 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
SMIM11A-201ENST00000399292 GNPATO15228 680 aa15.73■□□□□ 0.11
SMIM11A-201ENST00000399292 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
SMIM11A-201ENST00000399292 SSFA2P28290 1259 aa15.73■□□□□ 0.11
SMIM11A-201ENST00000399292 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMIM11A-201ENST00000399292 MRPL50Q8N5N7 158 aaKnown RBP15.73■□□□□ 0.11
SMIM11A-201ENST00000399292 NBPF3Q9H094 633 aa15.73■□□□□ 0.11
SMIM11A-201ENST00000399292 RC3H1Q5TC82 1133 aaKnown RBP15.72■□□□□ 0.11
SMIM11A-201ENST00000399292 MSL1Q68DK7 614 aa15.72■□□□□ 0.11
SMIM11A-201ENST00000399292 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
SMIM11A-201ENST00000399292 AMIGO3Q86WK7 504 aa15.72■□□□□ 0.11
SMIM11A-201ENST00000399292 EPAS1Q99814 870 aa15.72■□□□□ 0.11
SMIM11A-201ENST00000399292 QSER1Q2KHR3 1735 aa15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 C5P01031 1676 aa15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 GOLGA8CPA6NN73 597 aa15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 GNAT3A8MTJ3 354 aa15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 FCHSD2O94868 740 aa15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 PRKAR2BP31323 418 aa15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 DDX10Q13206 875 aaKnown RBP15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 RTCBQ9Y3I0 505 aaKnown RBP15.71■□□□□ 0.11
SMIM11A-201ENST00000399292 COL9A1P20849 921 aa15.7■□□□□ 0.1
SMIM11A-201ENST00000399292 TRAPPC3LQ5T215 181 aa15.7■□□□□ 0.1
SMIM11A-201ENST00000399292 PHACTR3Q96KR7 559 aa15.7■□□□□ 0.1
SMIM11A-201ENST00000399292 C4BP0C0L5 1744 aa15.7■□□□□ 0.1
SMIM11A-201ENST00000399292 UTRNP46939 3433 aa15.7■□□□□ 0.1
SMIM11A-201ENST00000399292 PTPN5P54829 565 aa15.69■□□□□ 0.1
SMIM11A-201ENST00000399292 THSD4Q6ZMP0 1018 aa15.69■□□□□ 0.1
SMIM11A-201ENST00000399292 GOLGB1Q14789 3259 aaKnown RBP15.69■□□□□ 0.1
SMIM11A-201ENST00000399292 MAP3K5Q99683 1374 aa15.68■□□□□ 0.1
SMIM11A-201ENST00000399292 RPS6KA4O75676 772 aa15.68■□□□□ 0.1
SMIM11A-201ENST00000399292 TEFQ10587 303 aa15.68■□□□□ 0.1
SMIM11A-201ENST00000399292 SLC39A6Q13433 755 aa15.68■□□□□ 0.1
SMIM11A-201ENST00000399292 IL17REQ8NFR9 667 aa15.68■□□□□ 0.1
SMIM11A-201ENST00000399292 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
SMIM11A-201ENST00000399292 TAF1LQ8IZX4 1826 aa15.67■□□□□ 0.1
SMIM11A-201ENST00000399292 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
SMIM11A-201ENST00000399292 RALBP1Q15311 655 aa15.67■□□□□ 0.1
SMIM11A-201ENST00000399292 PROX2Q3B8N5 592 aa15.67■□□□□ 0.1
SMIM11A-201ENST00000399292 WNT2BQ93097 391 aa15.67■□□□□ 0.1
SMIM11A-201ENST00000399292 RABGEF1Q9UJ41 708 aa15.67■□□□□ 0.1
SMIM11A-201ENST00000399292 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
SMIM11A-201ENST00000399292 CRKLP46109 303 aaKnown RBP15.66■□□□□ 0.1
SMIM11A-201ENST00000399292 ARHGEF1Q92888 912 aaKnown RBP15.66■□□□□ 0.1
SMIM11A-201ENST00000399292 YY1P25490 414 aa15.65■□□□□ 0.1
SMIM11A-201ENST00000399292 RFC4P35249 363 aa15.65■□□□□ 0.1
SMIM11A-201ENST00000399292 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
SMIM11A-201ENST00000399292 NEFMP07197 916 aa15.64■□□□□ 0.09
SMIM11A-201ENST00000399292 C6orf132Q5T0Z8 1188 aa15.64■□□□□ 0.09
SMIM11A-201ENST00000399292 PAXIP1Q6ZW49 1069 aaPredicted RBP15.64■□□□□ 0.09
SMIM11A-201ENST00000399292 DNAJC10Q8IXB1 793 aa15.64■□□□□ 0.09
SMIM11A-201ENST00000399292 VSIG10Q8N0Z9 540 aa15.64■□□□□ 0.09
SMIM11A-201ENST00000399292 NLGN1Q8N2Q7 840 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms