RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 MBIPQ9NS73 344 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 RSPH14Q9UHP6 348 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 ASXL1Q8IXJ9 1541 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 POLR3DP05423 398 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-205ENST00000399050 PTGS1P23219 599 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 UBASH3AP57075 661 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 ZSCAN16Q9H4T2 348 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-205ENST00000399050 ARHGEF11O15085 1522 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 GOLGA6L10A0A0M3HER8 536 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 F13A1P00488 732 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 TOPBP1Q92547 1522 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 ATF3P18847 181 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 DNM1Q05193 864 aaKnown RBP9.98□□□□□ -0.81
CTNND1-205ENST00000399050 ESYT1Q9BSJ8 1104 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 IFIT1P09914 478 aaKnown RBP9.98□□□□□ -0.81
CTNND1-205ENST00000399050 RBSNQ9H1K0 784 aa9.98□□□□□ -0.81
CTNND1-205ENST00000399050 PHAXQ9H814 394 aaKnown RBP9.98□□□□□ -0.81
CTNND1-205ENST00000399050 MPHOSPH8Q99549 860 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 TNNQ9UQP3 1299 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 AOPEPQ8N6M6 819 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 NEK1Q96PY6 1258 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 ALS2CR12Q96Q35 445 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 TSG101Q99816 390 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 MYD88Q99836 296 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 CUL7Q14999 1698 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 RALGAPBQ86X10 1494 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 TYRO3Q06418 890 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 ZGPATQ8N5A5 531 aaKnown RBP9.97□□□□□ -0.81
CTNND1-205ENST00000399050 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-205ENST00000399050 DACT1Q9NYF0 836 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 ZNF213O14771 459 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 HSF2BPO75031 334 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 MCM6Q14566 821 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 NUDT16Q96DE0 195 aaKnown RBP9.97□□□□□ -0.81
CTNND1-205ENST00000399050 ECHDC1Q9NTX5 307 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 KIF14Q15058 1648 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 PARD3Q8TEW0 1356 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 TMEM132AQ24JP5 1023 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 MAATS1Q7Z4T9 603 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 C16orf71Q8IYS4 520 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-205ENST00000399050 LRP2BPQ9P2M1 347 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 EMILIN1Q9Y6C2 1016 aa9.97□□□□□ -0.81
CTNND1-205ENST00000399050 PPFIA3O75145 1194 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 ANAPC15P60006 121 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 FEZ1Q99689 392 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 GOLGA8AA7E2F4 631 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 FLIIQ13045 1269 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 HLTFQ14527 1009 aaKnown RBP eCLIP9.96□□□□□ -0.815e-6■□□□□ 9.8
CTNND1-205ENST00000399050 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.96□□□□□ -0.817e-6■□□□□ 8.3
CTNND1-205ENST00000399050 NAA15Q9BXJ9 866 aaKnown RBP9.96□□□□□ -0.81
CTNND1-205ENST00000399050 JADE2Q9NQC1 790 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 NSD2O96028 1365 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 GCOM1H8Y6P7 765 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-205ENST00000399050 MYZAPP0CAP1 466 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 CCDC82Q8N4S0 544 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 AKAP2Q9Y2D5 859 aa9.96□□□□□ -0.81
CTNND1-205ENST00000399050 EZRP15311 586 aaKnown RBP9.96□□□□□ -0.82
CTNND1-205ENST00000399050 SLC52A1Q9NWF4 448 aa9.96□□□□□ -0.82
CTNND1-205ENST00000399050 HMG20BQ9P0W2 317 aa9.96□□□□□ -0.82
CTNND1-205ENST00000399050 IQGAP2Q13576 1575 aa9.96□□□□□ -0.82
CTNND1-205ENST00000399050 MATR3P43243 847 aaKnown RBP eCLIP9.96□□□□□ -0.826e-7■■■■□ 22.1
CTNND1-205ENST00000399050 TDRD12Q587J7 1177 aaKnown RBP9.96□□□□□ -0.82
CTNND1-205ENST00000399050 CCDC196A0A1B0GTZ2 297 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 SYT1P21579 422 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 PDE1AP54750 535 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 LARP1Q6PKG0 1096 aaKnown RBP9.95□□□□□ -0.82
CTNND1-205ENST00000399050 NME9Q86XW9 330 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 USP16Q9Y5T5 823 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CCDC175P0C221 793 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 METTL24Q5JXM2 366 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CCDC102BQ68D86 513 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 ARHGAP45Q92619 1136 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 GOLGA1Q92805 767 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 SRRTQ9BXP5 876 aaKnown RBP9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CCDC91Q7Z6B0 441 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CTAGE8P0CG41 777 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CAPN2P17655 700 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 TTC31Q49AM3 519 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CTAGE4Q8IX94 777 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 RNF216Q9NWF9 866 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-205ENST00000399050 FGFR1OPO95684 399 aaKnown RBP9.95□□□□□ -0.82
CTNND1-205ENST00000399050 RLBP1P12271 317 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 SSR1P43307 286 aaKnown RBP9.95□□□□□ -0.82
CTNND1-205ENST00000399050 SYKP43405 635 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 PPP1R42Q7Z4L9 355 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 VPS18Q9P253 973 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 NESP48681 1621 aa9.95□□□□□ -0.82
CTNND1-205ENST00000399050 DNMBPQ6XZF7 1577 aa9.94□□□□□ -0.82
CTNND1-205ENST00000399050 FAM83GA6ND36 823 aa9.94□□□□□ -0.82
CTNND1-205ENST00000399050 MTIF2P46199 727 aaKnown RBP9.94□□□□□ -0.82
CTNND1-205ENST00000399050 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
CTNND1-205ENST00000399050 NAPBQ9H115 298 aa9.94□□□□□ -0.82
CTNND1-205ENST00000399050 ORC3Q9UBD5 711 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-205ENST00000399050 MINDY4BA8MYZ0 360 aa9.94□□□□□ -0.82
CTNND1-205ENST00000399050 NF2P35240 595 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms