RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 DNAJC10Q8IXB1 793 aa28.82■■■□□ 2.2
CDH23-206ENST00000398842 MTX1Q13505 466 aa28.81■■■□□ 2.2
CDH23-206ENST00000398842 PLEKHM2Q8IWE5 1019 aa28.81■■■□□ 2.2
CDH23-206ENST00000398842 SYTL4Q96C24 671 aaPredicted RBP28.81■■■□□ 2.2
CDH23-206ENST00000398842 EXOC6BQ9Y2D4 811 aa28.81■■■□□ 2.2
CDH23-206ENST00000398842 SMARCA5O60264 1052 aaPredicted RBP28.8■■■□□ 2.2
CDH23-206ENST00000398842 BMP2KLQ5H9B9 411 aa28.8■■■□□ 2.2
CDH23-206ENST00000398842 RBM42Q9BTD8 480 aaKnown RBP28.8■■■□□ 2.2
CDH23-206ENST00000398842 GCKRQ14397 625 aa28.8■■■□□ 2.2
CDH23-206ENST00000398842 APBB1O00213 710 aa28.79■■■□□ 2.2
CDH23-206ENST00000398842 FAM98CQ17RN3 349 aaKnown RBP28.79■■■□□ 2.2
CDH23-206ENST00000398842 TTLL7Q6ZT98 887 aa28.79■■■□□ 2.2
CDH23-206ENST00000398842 C16orf71Q8IYS4 520 aaPredicted RBP28.79■■■□□ 2.2
CDH23-206ENST00000398842 SLC4A9Q96Q91 983 aa28.79■■■□□ 2.2
CDH23-206ENST00000398842 TJP1Q07157 1748 aa28.79■■■□□ 2.2
CDH23-206ENST00000398842 NPM2Q86SE8 214 aaKnown RBP28.78■■■□□ 2.2
CDH23-206ENST00000398842 SRGAP3O43295 1099 aa28.78■■■□□ 2.2
CDH23-206ENST00000398842 SEC24BO95487 1268 aa28.78■■■□□ 2.2
CDH23-206ENST00000398842 STARD3NLO95772 234 aa28.77■■■□□ 2.2
CDH23-206ENST00000398842 KAZALD1Q96I82 304 aa28.77■■■□□ 2.2
CDH23-206ENST00000398842 SUCLG2Q96I99 432 aa28.76■■■□□ 2.19
CDH23-206ENST00000398842 TRPC5Q9UL62 973 aaPredicted RBP28.76■■■□□ 2.19
CDH23-206ENST00000398842 LRRCC1Q9C099 1032 aa28.75■■■□□ 2.19
CDH23-206ENST00000398842 QTRT2Q9H974 415 aaKnown RBP28.75■■■□□ 2.19
CDH23-206ENST00000398842 OTUD7AQ8TE49 926 aaPredicted RBP28.75■■■□□ 2.19
CDH23-206ENST00000398842 GJD4Q96KN9 370 aaPredicted RBP28.75■■■□□ 2.19
CDH23-206ENST00000398842 ACSBG1Q96GR2 724 aa28.74■■■□□ 2.19
CDH23-206ENST00000398842 THSD7AQ9UPZ6 1657 aa28.74■■■□□ 2.19
CDH23-206ENST00000398842 ATRNO75882 1429 aa28.74■■■□□ 2.19
CDH23-206ENST00000398842 CYP19A1P11511 503 aaPredicted RBP28.73■■■□□ 2.19
CDH23-206ENST00000398842 A0A0G2JS52 829 aa28.72■■■□□ 2.19
CDH23-206ENST00000398842 RAB11FIP3O75154 756 aa28.72■■■□□ 2.19
CDH23-206ENST00000398842 MYT1Q01538 1121 aa28.72■■■□□ 2.19
CDH23-206ENST00000398842 COL15A1P39059 1388 aa28.71■■■□□ 2.19
CDH23-206ENST00000398842 ATP5J2-PTCD1G3V325 749 aa28.71■■■□□ 2.19
CDH23-206ENST00000398842 SURF6O75683 361 aaKnown RBP28.71■■■□□ 2.19
CDH23-206ENST00000398842 BICC1Q9H694 974 aaKnown RBP28.71■■■□□ 2.19
CDH23-206ENST00000398842 CICQ96RK0 1608 aaPredicted RBP28.7■■■□□ 2.19
CDH23-206ENST00000398842 GSPT1P15170 499 aaKnown RBP28.7■■■□□ 2.19
CDH23-206ENST00000398842 TTC22Q5TAA0 569 aa28.7■■■□□ 2.19
CDH23-206ENST00000398842 NOP58Q9Y2X3 529 aaKnown RBP28.7■■■□□ 2.19
CDH23-206ENST00000398842 SALL3Q9BXA9 1300 aa28.7■■■□□ 2.18
CDH23-206ENST00000398842 IPO9Q96P70 1041 aaKnown RBP28.69■■■□□ 2.18
CDH23-206ENST00000398842 OSBPL3Q9H4L5 887 aa28.69■■■□□ 2.18
CDH23-206ENST00000398842 ZBTB3Q9H5J0 574 aa28.69■■■□□ 2.18
CDH23-206ENST00000398842 BCL11AQ9H165 835 aa28.68■■■□□ 2.18
CDH23-206ENST00000398842 MSH5O43196 834 aa28.67■■■□□ 2.18
CDH23-206ENST00000398842 CASP7P55210 303 aa28.67■■■□□ 2.18
CDH23-206ENST00000398842 HSP90AB4PQ58FF6 505 aa28.67■■■□□ 2.18
CDH23-206ENST00000398842 A0A087WZG4 1122 aa28.66■■■□□ 2.18
CDH23-206ENST00000398842 PDE1AP54750 535 aa28.65■■■□□ 2.18
CDH23-206ENST00000398842 EPHA10Q5JZY3 1008 aa28.65■■■□□ 2.18
CDH23-206ENST00000398842 ZNF772Q68DY9 489 aaPredicted RBP28.65■■■□□ 2.18
CDH23-206ENST00000398842 RHPN1Q8TCX5 695 aa28.65■■■□□ 2.18
CDH23-206ENST00000398842 H7C1W4 665 aa28.65■■■□□ 2.18
CDH23-206ENST00000398842 UBE3BQ7Z3V4 1068 aa28.65■■■□□ 2.18
CDH23-206ENST00000398842 KIF1BPQ96EK5 621 aa28.65■■■□□ 2.18
CDH23-206ENST00000398842 CWC25Q9NXE8 425 aaPredicted RBP28.65■■■□□ 2.18
CDH23-206ENST00000398842 KCNQ2O43526 872 aa28.64■■■□□ 2.18
CDH23-206ENST00000398842 CCDC191Q8NCU4 936 aa28.64■■■□□ 2.18
CDH23-206ENST00000398842 ZBTB1Q9Y2K1 713 aa28.64■■■□□ 2.18
CDH23-206ENST00000398842 TUBGCP6Q96RT7 1819 aa28.63■■■□□ 2.17
CDH23-206ENST00000398842 RREB1Q92766 1687 aa28.63■■■□□ 2.17
CDH23-206ENST00000398842 KIF6Q6ZMV9 814 aa28.63■■■□□ 2.17
CDH23-206ENST00000398842 ISCA1Q9BUE6 129 aa28.63■■■□□ 2.17
CDH23-206ENST00000398842 ZNF330Q9Y3S2 320 aaPredicted RBP28.63■■■□□ 2.17
CDH23-206ENST00000398842 RABL6Q3YEC7 729 aaPredicted RBP28.62■■■□□ 2.17
CDH23-206ENST00000398842 JARID2Q92833 1246 aaPredicted RBP28.62■■■□□ 2.17
CDH23-206ENST00000398842 PALLDQ8WX93 1383 aa28.62■■■□□ 2.17
CDH23-206ENST00000398842 ZNF831Q5JPB2 1677 aa28.62■■■□□ 2.17
CDH23-206ENST00000398842 LOC102724428A0A0B4J2F2 783 aa28.62■■■□□ 2.17
CDH23-206ENST00000398842 SIK1P57059 783 aa28.62■■■□□ 2.17
CDH23-206ENST00000398842 TCIRG1Q13488 830 aa28.62■■■□□ 2.17
CDH23-206ENST00000398842 SMARCC1Q92922 1105 aaPredicted RBP28.62■■■□□ 2.17
CDH23-206ENST00000398842 UPF2Q9HAU5 1272 aaKnown RBP28.62■■■□□ 2.17
CDH23-206ENST00000398842 MAP3K15Q6ZN16 1313 aa28.62■■■□□ 2.17
CDH23-206ENST00000398842 ILDR1Q86SU0 546 aaPredicted RBP28.61■■■□□ 2.17
CDH23-206ENST00000398842 IL1RAPL2Q9NP60 686 aa28.61■■■□□ 2.17
CDH23-206ENST00000398842 STAP2Q9UGK3 403 aa28.61■■■□□ 2.17
CDH23-206ENST00000398842 PA2G4Q9UQ80 394 aaKnown RBP28.61■■■□□ 2.17
CDH23-206ENST00000398842 IL6STP40189 918 aaPredicted RBP28.6■■■□□ 2.17
CDH23-206ENST00000398842 MX1P20591 662 aa28.6■■■□□ 2.17
CDH23-206ENST00000398842 ATP6V1AP38606 617 aa28.6■■■□□ 2.17
CDH23-206ENST00000398842 TRIM28Q13263 835 aaKnown RBP28.6■■■□□ 2.17
CDH23-206ENST00000398842 TBC1D32Q96NH3 1257 aa28.59■■■□□ 2.17
CDH23-206ENST00000398842 ANKRD36CQ5JPF3 1778 aa28.58■■■□□ 2.17
CDH23-206ENST00000398842 CDC45O75419 566 aa28.58■■■□□ 2.17
CDH23-206ENST00000398842 TBC1D9Q6ZT07 1266 aa28.58■■■□□ 2.17
CDH23-206ENST00000398842 SEPT12Q8IYM1 358 aa28.58■■■□□ 2.17
CDH23-206ENST00000398842 ONECUT3O60422 494 aaPredicted RBP28.57■■■□□ 2.16
CDH23-206ENST00000398842 SDSP20132 328 aa28.57■■■□□ 2.16
CDH23-206ENST00000398842 COL5A3P25940 1745 aaPredicted RBP28.57■■■□□ 2.16
CDH23-206ENST00000398842 ITPK1Q13572 414 aa28.57■■■□□ 2.16
CDH23-206ENST00000398842 INTS5Q6P9B9 1019 aaKnown RBP28.57■■■□□ 2.16
CDH23-206ENST00000398842 GIGYF2Q6Y7W6 1299 aaKnown RBP28.57■■■□□ 2.16
CDH23-206ENST00000398842 ERC1Q8IUD2 1116 aa28.57■■■□□ 2.16
CDH23-206ENST00000398842 RGS17Q9UGC6 210 aaPredicted RBP28.57■■■□□ 2.16
CDH23-206ENST00000398842 AOX1Q06278 1338 aa28.57■■■□□ 2.16
CDH23-206ENST00000398842 OS9Q13438 667 aaPredicted RBP28.57■■■□□ 2.16
CDH23-206ENST00000398842 DDRGK1Q96HY6 314 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms