RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 GDF10P55107 478 aa6.17□□□□□ -1.42
CD47-203ENST00000398258 TRIM28Q13263 835 aaKnown RBP6.17□□□□□ -1.42
CD47-203ENST00000398258 SAMD5Q5TGI4 173 aa6.17□□□□□ -1.42
CD47-203ENST00000398258 PARP3Q9Y6F1 533 aa6.17□□□□□ -1.42
CD47-203ENST00000398258 SPDYE3A6NKU9 549 aa6.16□□□□□ -1.42
CD47-203ENST00000398258 SIN3BO75182 1162 aa6.16□□□□□ -1.42
CD47-203ENST00000398258 TXLNAP40222 546 aa6.16□□□□□ -1.42
CD47-203ENST00000398258 SMTNP53814 917 aa6.16□□□□□ -1.42
CD47-203ENST00000398258 NRG1Q02297 640 aaPredicted RBP6.16□□□□□ -1.42
CD47-203ENST00000398258 MTMR14Q8NCE2 650 aa6.16□□□□□ -1.42
CD47-203ENST00000398258 TMEM229AB2RXF0 380 aa6.15□□□□□ -1.42
CD47-203ENST00000398258 ALAS2P22557 587 aa6.15□□□□□ -1.42
CD47-203ENST00000398258 SFSWAPQ12872 951 aaKnown RBP6.15□□□□□ -1.42
CD47-203ENST00000398258 OXLD1Q5BKU9 147 aa6.15□□□□□ -1.42
CD47-203ENST00000398258 RAB44Q7Z6P3 723 aaPredicted RBP6.15□□□□□ -1.42
CD47-203ENST00000398258 TNFRSF25Q93038 417 aa6.15□□□□□ -1.42
CD47-203ENST00000398258 NACC1Q96RE7 527 aa6.15□□□□□ -1.42
CD47-203ENST00000398258 CHIC2Q9UKJ5 165 aa6.15□□□□□ -1.42
CD47-203ENST00000398258 DOLKQ9UPQ8 538 aa6.15□□□□□ -1.42
CD47-203ENST00000398258 MTFR1Q15390 333 aa6.14□□□□□ -1.43
CD47-203ENST00000398258 TXNRD3Q86VQ6 643 aa6.14□□□□□ -1.43
CD47-203ENST00000398258 ZDHHC1Q8WTX9 485 aa6.14□□□□□ -1.43
CD47-203ENST00000398258 C7orf43Q8WVR3 580 aa6.14□□□□□ -1.43
CD47-203ENST00000398258 TP53INP1Q96A56 240 aa6.14□□□□□ -1.43
CD47-203ENST00000398258 ZDHHC3Q9NYG2 299 aa6.14□□□□□ -1.43
CD47-203ENST00000398258 SERTAD1Q9UHV2 236 aa6.14□□□□□ -1.43
CD47-203ENST00000398258 RNF114Q9Y508 228 aa6.14□□□□□ -1.43
CD47-203ENST00000398258 A0A0A0MRY4 1105 aa6.13□□□□□ -1.43
CD47-203ENST00000398258 USP4Q13107 963 aa6.13□□□□□ -1.43
CD47-203ENST00000398258 C9orf172C9J069 976 aa6.12□□□□□ -1.43
CD47-203ENST00000398258 ADH7P40394 386 aa6.12□□□□□ -1.43
CD47-203ENST00000398258 NBPF1Q3BBV0 1214 aa6.12□□□□□ -1.43
CD47-203ENST00000398258 ILDR2Q71H61 639 aa6.12□□□□□ -1.43
CD47-203ENST00000398258 SLC4A9Q96Q91 983 aa6.12□□□□□ -1.43
CD47-203ENST00000398258 ZNF330Q9Y3S2 320 aaPredicted RBP6.12□□□□□ -1.43
CD47-203ENST00000398258 CDK2AP1O14519 115 aa6.11□□□□□ -1.43
CD47-203ENST00000398258 LRRC69Q6ZNQ3 347 aa6.11□□□□□ -1.43
CD47-203ENST00000398258 LENG1Q96BZ8 264 aaPredicted RBP6.11□□□□□ -1.43
CD47-203ENST00000398258 SNRKQ9NRH2 765 aa6.11□□□□□ -1.43
CD47-203ENST00000398258 A6NJY4 79 aa6.1□□□□□ -1.43
CD47-203ENST00000398258 ELNP15502 786 aa6.1□□□□□ -1.43
CD47-203ENST00000398258 TATP17735 454 aaPredicted RBP6.1□□□□□ -1.43
CD47-203ENST00000398258 TRAPPC3LQ5T215 181 aa6.1□□□□□ -1.43
CD47-203ENST00000398258 ZNF592Q92610 1267 aa6.1□□□□□ -1.43
CD47-203ENST00000398258 CABP1Q9NZU7 370 aa6.1□□□□□ -1.43
CD47-203ENST00000398258 RNF112Q9ULX5 631 aa6.1□□□□□ -1.43
CD47-203ENST00000398258 NDUFB9Q9Y6M9 179 aa6.1□□□□□ -1.43
CD47-203ENST00000398258 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
CD47-203ENST00000398258 SOCS7O14512 581 aa6.09□□□□□ -1.43
CD47-203ENST00000398258 SH3PXD2AQ5TCZ1 1133 aa6.09□□□□□ -1.43
CD47-203ENST00000398258 BICDL1Q6ZP65 573 aa6.09□□□□□ -1.43
CD47-203ENST00000398258 GJA3Q9Y6H8 435 aa6.09□□□□□ -1.43
CD47-203ENST00000398258 TAL1P17542 331 aaPredicted RBP6.08□□□□□ -1.44
CD47-203ENST00000398258 SPEM2Q0P670 501 aa6.08□□□□□ -1.44
CD47-203ENST00000398258 PCMTD1Q96MG8 357 aaPredicted RBP6.08□□□□□ -1.44
CD47-203ENST00000398258 GOPCQ9HD26 462 aa6.08□□□□□ -1.44
CD47-203ENST00000398258 EML1O00423 815 aa6.07□□□□□ -1.44
CD47-203ENST00000398258 IRF5Q13568 498 aa6.07□□□□□ -1.44
CD47-203ENST00000398258 FMR1NBQ8N0W7 255 aaPredicted RBP6.06□□□□□ -1.44
CD47-203ENST00000398258 NAGPAQ9UK23 515 aa6.06□□□□□ -1.44
CD47-203ENST00000398258 PCDHGA11Q9Y5H2 935 aa6.06□□□□□ -1.44
CD47-203ENST00000398258 LILRB5O75023 590 aa6.05□□□□□ -1.44
CD47-203ENST00000398258 AFF1P51825 1210 aaKnown RBP6.05□□□□□ -1.44
CD47-203ENST00000398258 SLFNL1Q499Z3 407 aa6.05□□□□□ -1.44
CD47-203ENST00000398258 TBCELQ5QJ74 424 aa6.05□□□□□ -1.44
CD47-203ENST00000398258 L3MBTL2Q969R5 705 aa6.05□□□□□ -1.44
CD47-203ENST00000398258 MEGF10Q96KG7 1140 aa6.05□□□□□ -1.44
CD47-203ENST00000398258 TBC1D2BQ9UPU7 963 aa6.05□□□□□ -1.44
CD47-203ENST00000398258 MED26O95402 600 aa6.04□□□□□ -1.44
CD47-203ENST00000398258 NOS3P29474 1203 aa6.04□□□□□ -1.44
CD47-203ENST00000398258 EPHA4P54764 986 aa6.04□□□□□ -1.44
CD47-203ENST00000398258 NUDT8Q8WV74 236 aa6.04□□□□□ -1.44
CD47-203ENST00000398258 SCHIP1Q9P0W5 487 aaPredicted RBP6.04□□□□□ -1.44
CD47-203ENST00000398258 SSTR4P31391 388 aa6.03□□□□□ -1.44
CD47-203ENST00000398258 IREB2P48200 963 aaKnown RBP6.03□□□□□ -1.44
CD47-203ENST00000398258 IRAK1P51617 712 aa6.03□□□□□ -1.44
CD47-203ENST00000398258 DMRTC2Q8IXT2 367 aaPredicted RBP6.03□□□□□ -1.44
CD47-203ENST00000398258 WFDC12Q8WWY7 111 aa6.03□□□□□ -1.44
CD47-203ENST00000398258 HSH2DQ96JZ2 352 aa6.03□□□□□ -1.44
CD47-203ENST00000398258 JPH1Q9HDC5 661 aaPredicted RBP6.03□□□□□ -1.44
CD47-203ENST00000398258 USP21Q9UK80 565 aa6.03□□□□□ -1.44
CD47-203ENST00000398258 ADAMTS4O75173 837 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 NOS2P35228 1153 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 PLAURQ03405 335 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 TEAD4Q15561 434 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 PLPP7Q8NBV4 271 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 ZNF280CQ8ND82 737 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 BANK1Q8NDB2 785 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 PCMTD2Q9NV79 361 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 SLC6A14Q9UN76 642 aa6.02□□□□□ -1.45
CD47-203ENST00000398258 OAS3Q9Y6K5 1087 aaKnown RBP6.02□□□□□ -1.45
CD47-203ENST00000398258 CD97P48960 835 aa6.01□□□□□ -1.45
CD47-203ENST00000398258 RAC1P63000 192 aa6.01□□□□□ -1.45
CD47-203ENST00000398258 PRR23CQ6ZRP0 262 aa6.01□□□□□ -1.45
CD47-203ENST00000398258 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
CD47-203ENST00000398258 SIRT1Q96EB6 747 aa6.01□□□□□ -1.45
CD47-203ENST00000398258 BRD7Q9NPI1 651 aa6.01□□□□□ -1.45
CD47-203ENST00000398258 KCNQ4P56696 695 aa6□□□□□ -1.45
CD47-203ENST00000398258 TYRO3Q06418 890 aa6□□□□□ -1.45
CD47-203ENST00000398258 TBC1D8BQ0IIM8 1120 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms