RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 MTX1Q13505 466 aa16.65■□□□□ 0.26
PPARG-206ENST00000397012 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
PPARG-206ENST00000397012 AFF2P51816 1311 aa16.65■□□□□ 0.26
PPARG-206ENST00000397012 POLA2Q14181 598 aa16.65■□□□□ 0.26
PPARG-206ENST00000397012 GJD4Q96KN9 370 aaPredicted RBP16.65■□□□□ 0.26
PPARG-206ENST00000397012 C9orf78Q9NZ63 289 aaPredicted RBP16.65■□□□□ 0.26
PPARG-206ENST00000397012 ATRNO75882 1429 aa16.65■□□□□ 0.26
PPARG-206ENST00000397012 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.25
PPARG-206ENST00000397012 CYP19A1P11511 503 aaPredicted RBP16.64■□□□□ 0.25
PPARG-206ENST00000397012 GCKRQ14397 625 aa16.64■□□□□ 0.25
PPARG-206ENST00000397012 MYD88Q99836 296 aa16.64■□□□□ 0.25
PPARG-206ENST00000397012 ZNF831Q5JPB2 1677 aa16.64■□□□□ 0.25
PPARG-206ENST00000397012 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
PPARG-206ENST00000397012 ACSBG1Q96GR2 724 aa16.63■□□□□ 0.25
PPARG-206ENST00000397012 PPP1R42Q7Z4L9 355 aa16.63■□□□□ 0.25
PPARG-206ENST00000397012 COL15A1P39059 1388 aa16.62■□□□□ 0.25
PPARG-206ENST00000397012 KAZALD1Q96I82 304 aa16.62■□□□□ 0.25
PPARG-206ENST00000397012 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
PPARG-206ENST00000397012 RREB1Q92766 1687 aa16.61■□□□□ 0.25
PPARG-206ENST00000397012 SMARCC1Q92922 1105 aaPredicted RBP16.6■□□□□ 0.25
PPARG-206ENST00000397012 KCNQ2O43526 872 aa16.6■□□□□ 0.25
PPARG-206ENST00000397012 SUCLG2Q96I99 432 aa16.6■□□□□ 0.25
PPARG-206ENST00000397012 NHSQ6T4R5 1651 aa16.59■□□□□ 0.25
PPARG-206ENST00000397012 SRGAP3O43295 1099 aa16.59■□□□□ 0.25
PPARG-206ENST00000397012 PLEKHM2Q8IWE5 1019 aa16.59■□□□□ 0.25
PPARG-206ENST00000397012 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
PPARG-206ENST00000397012 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
PPARG-206ENST00000397012 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.25
PPARG-206ENST00000397012 SIK1P57059 783 aa16.58■□□□□ 0.25
PPARG-206ENST00000397012 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.25
PPARG-206ENST00000397012 COL5A3P25940 1745 aaPredicted RBP16.58■□□□□ 0.24
PPARG-206ENST00000397012 BMP2KLQ5H9B9 411 aa16.58■□□□□ 0.24
PPARG-206ENST00000397012 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.24
PPARG-206ENST00000397012 SBF2Q86WG5 1849 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
PPARG-206ENST00000397012 CASP7P55210 303 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 ZBTB3Q9H5J0 574 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 H7C1W4 665 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 SMARCA5O60264 1052 aaPredicted RBP16.57■□□□□ 0.24
PPARG-206ENST00000397012 TRIM28Q13263 835 aaKnown RBP16.57■□□□□ 0.24
PPARG-206ENST00000397012 C16orf71Q8IYS4 520 aaPredicted RBP16.57■□□□□ 0.24
PPARG-206ENST00000397012 ISCA1Q9BUE6 129 aa16.57■□□□□ 0.24
PPARG-206ENST00000397012 BICC1Q9H694 974 aaKnown RBP16.57■□□□□ 0.24
PPARG-206ENST00000397012 BTAF1O14981 1849 aa16.56■□□□□ 0.24
PPARG-206ENST00000397012 MYH14Q7Z406 1995 aaKnown RBP16.56■□□□□ 0.24
PPARG-206ENST00000397012 A0A0G2JS52 829 aa16.56■□□□□ 0.24
PPARG-206ENST00000397012 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
PPARG-206ENST00000397012 MYT1Q01538 1121 aa16.56■□□□□ 0.24
PPARG-206ENST00000397012 TCIRG1Q13488 830 aa16.56■□□□□ 0.24
PPARG-206ENST00000397012 MAP3K15Q6ZN16 1313 aa16.56■□□□□ 0.24
PPARG-206ENST00000397012 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
PPARG-206ENST00000397012 A0A087WZG4 1122 aa16.55■□□□□ 0.24
PPARG-206ENST00000397012 INTS5Q6P9B9 1019 aaKnown RBP16.55■□□□□ 0.24
PPARG-206ENST00000397012 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
PPARG-206ENST00000397012 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
PPARG-206ENST00000397012 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
PPARG-206ENST00000397012 NUP98P52948 1817 aa16.55■□□□□ 0.24
PPARG-206ENST00000397012 APBB1O00213 710 aa16.55■□□□□ 0.24
PPARG-206ENST00000397012 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
PPARG-206ENST00000397012 ITPK1Q13572 414 aa16.55■□□□□ 0.24
PPARG-206ENST00000397012 RABL6Q3YEC7 729 aaPredicted RBP16.55■□□□□ 0.24
PPARG-206ENST00000397012 HSP90AB4PQ58FF6 505 aa16.55■□□□□ 0.24
PPARG-206ENST00000397012 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
PPARG-206ENST00000397012 QTRT2Q9H974 415 aaKnown RBP16.55■□□□□ 0.24
PPARG-206ENST00000397012 SALL3Q9BXA9 1300 aa16.55■□□□□ 0.24
PPARG-206ENST00000397012 EIF5P55010 431 aaKnown RBP16.54■□□□□ 0.24
PPARG-206ENST00000397012 CCDC87Q9NVE4 849 aa16.54■□□□□ 0.24
PPARG-206ENST00000397012 EPHA10Q5JZY3 1008 aa16.53■□□□□ 0.24
PPARG-206ENST00000397012 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
PPARG-206ENST00000397012 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
PPARG-206ENST00000397012 ERVV-1B6SEH8 477 aa16.53■□□□□ 0.24
PPARG-206ENST00000397012 CRKLP46109 303 aaKnown RBP16.53■□□□□ 0.24
PPARG-206ENST00000397012 SEPT12Q8IYM1 358 aa16.53■□□□□ 0.24
PPARG-206ENST00000397012 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
PPARG-206ENST00000397012 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
PPARG-206ENST00000397012 ZNF330Q9Y3S2 320 aaPredicted RBP16.52■□□□□ 0.24
PPARG-206ENST00000397012 TUBGCP6Q96RT7 1819 aa16.52■□□□□ 0.23
PPARG-206ENST00000397012 SEC24BO95487 1268 aa16.52■□□□□ 0.23
PPARG-206ENST00000397012 TTC22Q5TAA0 569 aa16.52■□□□□ 0.23
PPARG-206ENST00000397012 PTF1AQ7RTS3 328 aa16.52■□□□□ 0.23
PPARG-206ENST00000397012 LY75O60449 1722 aa16.51■□□□□ 0.23
PPARG-206ENST00000397012 GSPT1P15170 499 aaKnown RBP16.51■□□□□ 0.23
PPARG-206ENST00000397012 HSP90AB3PQ58FF7 597 aa16.51■□□□□ 0.23
PPARG-206ENST00000397012 PDE1AP54750 535 aa16.5■□□□□ 0.23
PPARG-206ENST00000397012 FOXO4P98177 505 aa16.5■□□□□ 0.23
PPARG-206ENST00000397012 HLFQ16534 295 aa16.5■□□□□ 0.23
PPARG-206ENST00000397012 DZIP3Q86Y13 1208 aaKnown RBP16.5■□□□□ 0.23
PPARG-206ENST00000397012 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
PPARG-206ENST00000397012 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
PPARG-206ENST00000397012 ERC1Q8IUD2 1116 aa16.5■□□□□ 0.23
PPARG-206ENST00000397012 BRWD3Q6RI45 1802 aa16.5■□□□□ 0.23
PPARG-206ENST00000397012 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
PPARG-206ENST00000397012 COPRSQ9NQ92 184 aa16.49■□□□□ 0.23
PPARG-206ENST00000397012 PCCAP05165 728 aaPredicted RBP16.48■□□□□ 0.23
PPARG-206ENST00000397012 ANP32AP39687 249 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms