RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 CC2D2BQ6DHV5 1058 aa4.73□□□□□ -1.65
XRCC4-203ENST00000396027 OGFOD2Q6N063 350 aa4.73□□□□□ -1.65
XRCC4-203ENST00000396027 NLRP8Q86W28 1048 aa4.73□□□□□ -1.65
XRCC4-203ENST00000396027 OCSTAMPQ9BR26 566 aa4.73□□□□□ -1.65
XRCC4-203ENST00000396027 M0R082 166 aa4.72□□□□□ -1.65
XRCC4-203ENST00000396027 PCBP4P57723 403 aaKnown RBP4.72□□□□□ -1.65
XRCC4-203ENST00000396027 ERVK-9P63128 1117 aa4.72□□□□□ -1.65
XRCC4-203ENST00000396027 ZNF417Q8TAU3 575 aa4.72□□□□□ -1.65
XRCC4-203ENST00000396027 ZNF587Q96SQ5 575 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-203ENST00000396027 ZCCHC2Q9C0B9 1178 aaKnown RBP4.72□□□□□ -1.65
XRCC4-203ENST00000396027 ATXN7O15265 892 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-203ENST00000396027 TPM2P07951 284 aa4.72□□□□□ -1.65
XRCC4-203ENST00000396027 NID1P14543 1247 aa4.72□□□□□ -1.65
XRCC4-203ENST00000396027 MCCP23508 829 aa4.72□□□□□ -1.65
XRCC4-203ENST00000396027 TERF1P54274 439 aa4.72□□□□□ -1.65
XRCC4-203ENST00000396027 CSPP1Q1MSJ5 1256 aa4.72□□□□□ -1.65
XRCC4-203ENST00000396027 NAP1L2Q9ULW6 460 aaPredicted RBP4.72□□□□□ -1.65
XRCC4-203ENST00000396027 LILRB3O75022 631 aa4.71□□□□□ -1.66
XRCC4-203ENST00000396027 RAC1P63000 192 aa4.71□□□□□ -1.66
XRCC4-203ENST00000396027 PDE4DQ08499 809 aa4.71□□□□□ -1.66
XRCC4-203ENST00000396027 TRAPPC3LQ5T215 181 aa4.71□□□□□ -1.66
XRCC4-203ENST00000396027 IPO9Q96P70 1041 aaKnown RBP4.71□□□□□ -1.66
XRCC4-203ENST00000396027 ZSCAN10Q96SZ4 725 aaPredicted RBP4.71□□□□□ -1.66
XRCC4-203ENST00000396027 DNAAF2Q9NVR5 837 aaKnown RBP4.71□□□□□ -1.66
XRCC4-203ENST00000396027 CCDC9Q9Y3X0 531 aaKnown RBP4.71□□□□□ -1.66
XRCC4-203ENST00000396027 ADARB2-AS1A8MUL3 147 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 KIF20AO95235 890 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 MAPTP10636 758 aaKnown RBP4.7□□□□□ -1.66
XRCC4-203ENST00000396027 FSTP19883 344 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 CD33P20138 364 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 CENPCQ03188 943 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 TNP2Q05952 138 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 UTP14CQ5TAP6 766 aaKnown RBP4.7□□□□□ -1.66
XRCC4-203ENST00000396027 PRR23CQ6ZRP0 262 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 PNMA1Q8ND90 353 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 ZNF622Q969S3 477 aaKnown RBP eCLIP4.7□□□□□ -1.66
XRCC4-203ENST00000396027 MDFIQ99750 246 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 ESYT1Q9BSJ8 1104 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 ARHGEF10LQ9HCE6 1279 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 USP21Q9UK80 565 aa4.7□□□□□ -1.66
XRCC4-203ENST00000396027 A0A0U1RQG5 324 aaPredicted RBP4.69□□□□□ -1.66
XRCC4-203ENST00000396027 SUPT5HO00267 1087 aaKnown RBP4.69□□□□□ -1.66
XRCC4-203ENST00000396027 L1TD1Q5T7N2 865 aaKnown RBP4.69□□□□□ -1.66
XRCC4-203ENST00000396027 TMEM214Q6NUQ4 689 aaKnown RBP4.69□□□□□ -1.66
XRCC4-203ENST00000396027 SMAP1Q8IYB5 467 aaPredicted RBP4.69□□□□□ -1.66
XRCC4-203ENST00000396027 MICALL1Q8N3F8 863 aa4.69□□□□□ -1.66
XRCC4-203ENST00000396027 CEP120Q8N960 986 aa4.69□□□□□ -1.66
XRCC4-203ENST00000396027 C1orf216Q8TAB5 229 aa4.69□□□□□ -1.66
XRCC4-203ENST00000396027 A0A0A0MRY4 1105 aa4.68□□□□□ -1.66
XRCC4-203ENST00000396027 TPRNQ4KMQ1 711 aa4.68□□□□□ -1.66
XRCC4-203ENST00000396027 C4orf17Q53FE4 359 aa4.68□□□□□ -1.66
XRCC4-203ENST00000396027 SLC24A3Q9HC58 644 aa4.68□□□□□ -1.66
XRCC4-203ENST00000396027 ISY1Q9ULR0 285 aaKnown RBP4.68□□□□□ -1.66
XRCC4-203ENST00000396027 SLC20A2Q08357 652 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 QPCTQ16769 361 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 MYSM1Q5VVJ2 828 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 TICAM2Q86XR7 235 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 CNKSR1Q969H4 720 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 DDRGK1Q96HY6 314 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 ESF1Q9H501 851 aaKnown RBP4.67□□□□□ -1.66
XRCC4-203ENST00000396027 ATP1B4Q9UN42 357 aaPredicted RBP4.67□□□□□ -1.66
XRCC4-203ENST00000396027 EEA1Q15075 1411 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 DCDC2BA2VCK2 349 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 SIN3BO75182 1162 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 GNRH1P01148 92 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 SPOCD1Q6ZMY3 1216 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 IL27Q8NEV9 243 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 PUS7Q96PZ0 661 aaKnown RBP4.67□□□□□ -1.66
XRCC4-203ENST00000396027 TSPYL1Q9H0U9 437 aa4.67□□□□□ -1.66
XRCC4-203ENST00000396027 PNNQ9H307 717 aaKnown RBP4.67□□□□□ -1.66
XRCC4-203ENST00000396027 CCER2I3L3R5 266 aa4.66□□□□□ -1.66
XRCC4-203ENST00000396027 KHNYNO15037 678 aaKnown RBP4.66□□□□□ -1.66
XRCC4-203ENST00000396027 GSC2O15499 205 aa4.66□□□□□ -1.66
XRCC4-203ENST00000396027 ALBP02768 609 aa4.66□□□□□ -1.66
XRCC4-203ENST00000396027 TBC1D9Q6ZT07 1266 aa4.66□□□□□ -1.66
XRCC4-203ENST00000396027 PPP4R2Q9NY27 417 aa4.66□□□□□ -1.66
XRCC4-203ENST00000396027 ADGRE2Q9UHX3 823 aa4.66□□□□□ -1.66
XRCC4-203ENST00000396027 STARD13Q9Y3M8 1113 aa4.66□□□□□ -1.66
XRCC4-203ENST00000396027 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.66□□□□□ -1.66
XRCC4-203ENST00000396027 PTCD1O75127 700 aaKnown RBP4.65□□□□□ -1.67
XRCC4-203ENST00000396027 FAM157BP0CG42 384 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 TMEM132AQ24JP5 1023 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 RNF20Q5VTR2 975 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 INTS5Q6P9B9 1019 aaKnown RBP4.65□□□□□ -1.67
XRCC4-203ENST00000396027 SHISA2Q6UWI4 295 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 SYT9Q86SS6 491 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 RHBDD1Q8TEB9 315 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 ASIC4Q96FT7 647 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 PSMD1Q99460 953 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 LIMD1Q9UGP4 676 aa4.65□□□□□ -1.67
XRCC4-203ENST00000396027 TRAK2O60296 914 aa4.64□□□□□ -1.67
XRCC4-203ENST00000396027 MED26O95402 600 aa4.64□□□□□ -1.67
XRCC4-203ENST00000396027 GRIK1P39086 918 aa4.64□□□□□ -1.67
XRCC4-203ENST00000396027 CLK2P49760 499 aaKnown RBP4.64□□□□□ -1.67
XRCC4-203ENST00000396027 C8orf86Q6ZUL3 223 aa4.64□□□□□ -1.67
XRCC4-203ENST00000396027 WFDC12Q8WWY7 111 aa4.64□□□□□ -1.67
XRCC4-203ENST00000396027 TNFRSF25Q93038 417 aa4.64□□□□□ -1.67
XRCC4-203ENST00000396027 PLCD4Q9BRC7 762 aa4.64□□□□□ -1.67
XRCC4-203ENST00000396027 GTPBP4Q9BZE4 634 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms