RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 MYSM1Q5VVJ2 828 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 BLOC1S3Q6QNY0 202 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 TCP11L2Q8N4U5 519 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 IL27Q8NEV9 243 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 PLSCR2Q9NRY7 297 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 TERF2IPQ9NYB0 399 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 RREB1Q92766 1687 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 USP47Q96K76 1375 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 BAG6P46379 1132 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 GRIPAP1Q4V328 841 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 LARP1Q6PKG0 1096 aaKnown RBP8.62□□□□□ -1.03
PTPN20-208ENST00000395727 HDGFL2Q7Z4V5 671 aaPredicted RBP8.62□□□□□ -1.03
PTPN20-208ENST00000395727 HLA-CQ95604 372 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 MTRQ99707 1265 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 STRN4Q9NRL3 753 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 LRP5O75197 1615 aa8.62□□□□□ -1.03
PTPN20-208ENST00000395727 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 LTN1O94822 1766 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 ST20-MTHFSA0A0A6YYL1 179 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 A0A0G2JS52 829 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 SPTLC1O15269 473 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
PTPN20-208ENST00000395727 GJA5P36382 358 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 EVA1CP58658 441 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 MYT1Q01538 1121 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 FAM196AQ6ZSG2 479 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 CDCA7Q9BWT1 371 aaPredicted RBP8.61□□□□□ -1.03
PTPN20-208ENST00000395727 MYOM1P52179 1685 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 OVOS2A0A0G2JMS6 1433 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 CCDC7Q96M83 1385 aa8.61□□□□□ -1.03
PTPN20-208ENST00000395727 NDUFV2P19404 249 aa8.6□□□□□ -1.03
PTPN20-208ENST00000395727 COPS2P61201 443 aa8.6□□□□□ -1.03
PTPN20-208ENST00000395727 RSBN1LQ6PCB5 846 aaPredicted RBP8.6□□□□□ -1.03
PTPN20-208ENST00000395727 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
PTPN20-208ENST00000395727 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
PTPN20-208ENST00000395727 RGPD5Q99666 1765 aa8.6□□□□□ -1.03
PTPN20-208ENST00000395727 NR1I2O75469 434 aa8.59□□□□□ -1.03
PTPN20-208ENST00000395727 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
PTPN20-208ENST00000395727 SCUBE3Q8IX30 993 aa8.59□□□□□ -1.03
PTPN20-208ENST00000395727 CARD10Q9BWT7 1032 aa8.59□□□□□ -1.03
PTPN20-208ENST00000395727 SLC12A5Q9H2X9 1139 aa8.59□□□□□ -1.03
PTPN20-208ENST00000395727 IL21Q9HBE4 155 aa8.59□□□□□ -1.03
PTPN20-208ENST00000395727 TNS2Q63HR2 1409 aa8.59□□□□□ -1.03
PTPN20-208ENST00000395727 NUP188Q5SRE5 1749 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 ZPR1O75312 459 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 FDX1P10109 184 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 TMF1P82094 1093 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 PDE3BQ13370 1112 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
PTPN20-208ENST00000395727 TUSC1Q2TAM9 212 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 RIC3Q7Z5B4 369 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 DEFB132Q7Z7B7 95 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 SALL2Q9Y467 1007 aaPredicted RBP8.58□□□□□ -1.04
PTPN20-208ENST00000395727 SBF2Q86WG5 1849 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 RTL1A6NKG5 1358 aa8.58□□□□□ -1.04
PTPN20-208ENST00000395727 KIF20BQ96Q89 1820 aa8.57□□□□□ -1.04
PTPN20-208ENST00000395727 TOM1L2Q6ZVM7 507 aa8.57□□□□□ -1.04
PTPN20-208ENST00000395727 NME9Q86XW9 330 aa8.57□□□□□ -1.04
PTPN20-208ENST00000395727 TMC1Q8TDI8 760 aa8.57□□□□□ -1.04
PTPN20-208ENST00000395727 THAP11Q96EK4 314 aa8.57□□□□□ -1.04
PTPN20-208ENST00000395727 USP35Q9P2H5 1018 aa8.57□□□□□ -1.04
PTPN20-208ENST00000395727 KIF24Q5T7B8 1368 aa8.57□□□□□ -1.04
PTPN20-208ENST00000395727 CLK2P49760 499 aaKnown RBP8.56□□□□□ -1.04
PTPN20-208ENST00000395727 DDB1Q16531 1140 aa8.56□□□□□ -1.04
PTPN20-208ENST00000395727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.56□□□□□ -1.04
PTPN20-208ENST00000395727 CAMKK2Q96RR4 588 aa8.56□□□□□ -1.04
PTPN20-208ENST00000395727 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
PTPN20-208ENST00000395727 ANKRD26Q9UPS8 1709 aa8.56□□□□□ -1.04
PTPN20-208ENST00000395727 NHSQ6T4R5 1651 aa8.56□□□□□ -1.04
PTPN20-208ENST00000395727 KCNC4Q03721 635 aa8.55□□□□□ -1.04
PTPN20-208ENST00000395727 Q3C1V9 767 aa8.55□□□□□ -1.04
PTPN20-208ENST00000395727 FAM182BQ5T319 152 aa8.55□□□□□ -1.04
PTPN20-208ENST00000395727 BRICD5Q6PL45 260 aa8.55□□□□□ -1.04
PTPN20-208ENST00000395727 POLR3EQ9NVU0 708 aa8.55□□□□□ -1.04
PTPN20-208ENST00000395727 PLSCR1O15162 318 aa8.54□□□□□ -1.04
PTPN20-208ENST00000395727 TRIM37O94972 964 aa8.54□□□□□ -1.04
PTPN20-208ENST00000395727 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
PTPN20-208ENST00000395727 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
PTPN20-208ENST00000395727 IP6K1Q92551 441 aa8.54□□□□□ -1.04
PTPN20-208ENST00000395727 COG3Q96JB2 828 aa8.54□□□□□ -1.04
PTPN20-208ENST00000395727 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPN20-208ENST00000395727 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
PTPN20-208ENST00000395727 FMNL1O95466 1100 aaPredicted RBP8.53□□□□□ -1.04
PTPN20-208ENST00000395727 TMEM132AQ24JP5 1023 aa8.53□□□□□ -1.04
PTPN20-208ENST00000395727 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
PTPN20-208ENST00000395727 FYB1O15117 783 aa8.52□□□□□ -1.05
PTPN20-208ENST00000395727 TLL1O43897 1013 aa8.52□□□□□ -1.05
PTPN20-208ENST00000395727 APBA3O96018 575 aa8.52□□□□□ -1.05
PTPN20-208ENST00000395727 CSB-PGBD3P0DP91 1061 aa8.52□□□□□ -1.05
PTPN20-208ENST00000395727 EZH2Q15910 746 aaKnown RBP8.52□□□□□ -1.05
PTPN20-208ENST00000395727 PRPF38BQ5VTL8 546 aaKnown RBP8.52□□□□□ -1.05
PTPN20-208ENST00000395727 MARCH10Q8NA82 808 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-208ENST00000395727 NKX2-3Q8TAU0 364 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms