RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 WRNQ14191 1432 aaPredicted RBP eCLIP9.17□□□□□ -0.94
TRPS1-203ENST00000395715 SYF2O95926 243 aaKnown RBP9.17□□□□□ -0.94
TRPS1-203ENST00000395715 CALCOCO2Q13137 446 aa9.17□□□□□ -0.94
TRPS1-203ENST00000395715 GKAP1Q5VSY0 366 aaPredicted RBP9.16□□□□□ -0.94
TRPS1-203ENST00000395715 PPP4R3AQ6IN85 833 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 POTEDQ86YR6 584 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 PFDN4Q9NQP4 134 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 CEP164Q9UPV0 1460 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 GNG11P61952 73 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 TMC6Q7Z403 805 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 WASF1Q92558 559 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 ATP2A1O14983 1001 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 CETN1Q12798 172 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 MKL2Q9ULH7 1088 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 TXNDC9O14530 226 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 ANKRD24Q8TF21 1146 aa9.16□□□□□ -0.94
TRPS1-203ENST00000395715 TPX2Q9ULW0 747 aaKnown RBP9.16□□□□□ -0.94
TRPS1-203ENST00000395715 ARHGEF2Q92974 986 aaKnown RBP9.15□□□□□ -0.94
TRPS1-203ENST00000395715 SDCCAG8Q86SQ7 713 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-203ENST00000395715 RNF10Q8N5U6 811 aaKnown RBP9.15□□□□□ -0.94
TRPS1-203ENST00000395715 HVCN1Q96D96 273 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-203ENST00000395715 PPP6R1Q9UPN7 881 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 PSMD6Q15008 389 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 NCAPGQ9BPX3 1015 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 NBPF8Q3BBV2 869 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 CCDC14Q49A88 953 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 VCX3AQ9NNX9 186 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 CETN3O15182 167 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 UBA5Q9GZZ9 404 aa9.15□□□□□ -0.94
TRPS1-203ENST00000395715 FAF1Q9UNN5 650 aaPredicted RBP9.15□□□□□ -0.94
TRPS1-203ENST00000395715 SPECC1L-ADORA2AF8WAN1 911 aa9.15□□□□□ -0.95
TRPS1-203ENST00000395715 DNAJC8O75937 253 aaPredicted RBP9.15□□□□□ -0.95
TRPS1-203ENST00000395715 TTC39AQ5SRH9 613 aa9.15□□□□□ -0.95
TRPS1-203ENST00000395715 FAM76AQ8TAV0 307 aa9.15□□□□□ -0.95
TRPS1-203ENST00000395715 NACAP1Q9BZK3 213 aa9.15□□□□□ -0.95
TRPS1-203ENST00000395715 TXNDC16Q9P2K2 825 aa9.15□□□□□ -0.95
TRPS1-203ENST00000395715 CTAGE5O15320 804 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 ADCY5O95622 1261 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 PEX19P40855 299 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 RNF216Q9NWF9 866 aaPredicted RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 CTAGE15A4D2H0 777 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 CTAGE8P0CG41 777 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 CTAGE4Q8IX94 777 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 TRIM4Q9C037 500 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 ATP2A2P16615 1042 aaKnown RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 RIPK4P57078 832 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 ZRANB2O95218 330 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 MICAL1Q8TDZ2 1067 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 KCNK9Q9NPC2 374 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 WDR70Q9NW82 654 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 TNIP1Q15025 636 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 GSTA5Q7RTV2 222 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 CUX2O14529 1486 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 NUTM2BA6NNL0 878 aaPredicted RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 NUTM2EB1AL46 878 aaPredicted RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 CCDC172P0C7W6 258 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 RBM5P52756 815 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 NUTM2AQ8IVF1 878 aaPredicted RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 SMAP1Q8IYB5 467 aaPredicted RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 TTC12Q9H892 705 aaPredicted RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 SPATS2LQ9NUQ6 558 aaKnown RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 UBAC1Q9BSL1 405 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 USP25Q9UHP3 1055 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 CTAGE9A4FU28 777 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 MYO1BO43795 1136 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 VIMP08670 466 aaKnown RBP9.14□□□□□ -0.95
TRPS1-203ENST00000395715 TRPC3Q13507 836 aa9.14□□□□□ -0.95
TRPS1-203ENST00000395715 KRT13P13646 458 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 INPP5BP32019 993 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 TUBB4BP68371 445 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 KIAA1524Q8TCG1 905 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 PANK1Q8TE04 598 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 SPAG5Q96R06 1193 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 GEN1Q17RS7 908 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 GOLGA1Q92805 767 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 MCUR1Q96AQ8 359 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 ZC3H6P61129 1189 aaKnown RBP9.13□□□□□ -0.95
TRPS1-203ENST00000395715 ATP2A3Q93084 1043 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 MRFAP1L1Q96HT8 127 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 BAG1Q99933 345 aaPredicted RBP9.13□□□□□ -0.95
TRPS1-203ENST00000395715 BRD2P25440 801 aaKnown RBP9.13□□□□□ -0.95
TRPS1-203ENST00000395715 SLC4A8Q2Y0W8 1093 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 BLOC1S2Q6QNY1 142 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 SMARCC2Q8TAQ2 1214 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 PDRG1Q9NUG6 133 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
TRPS1-203ENST00000395715 LRRC23Q53EV4 343 aaPredicted RBP9.13□□□□□ -0.95
TRPS1-203ENST00000395715 SMIM23A6NLE4 172 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 MX2P20592 715 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 PDCD2Q16342 344 aaPredicted RBP9.13□□□□□ -0.95
TRPS1-203ENST00000395715 KIF6Q6ZMV9 814 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 ARFGAP2Q8N6H7 521 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 USP6NLQ92738 828 aa9.13□□□□□ -0.95
TRPS1-203ENST00000395715 EIF2AQ9BY44 585 aaKnown RBP9.13□□□□□ -0.95
TRPS1-203ENST00000395715 RAP1GDS1P52306 607 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 FYB2Q5VWT5 728 aa9.12□□□□□ -0.95
TRPS1-203ENST00000395715 APAF1O14727 1248 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms