RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 PIP4K2AP48426 406 aaPredicted RBP30.81■■■□□ 2.52
CTF1-202ENST00000395019 ERBB4Q15303 1308 aa30.81■■■□□ 2.52
CTF1-202ENST00000395019 SMC5Q8IY18 1101 aa30.81■■■□□ 2.52
CTF1-202ENST00000395019 KSR2Q6VAB6 950 aa30.8■■■□□ 2.52
CTF1-202ENST00000395019 ATP10DQ9P241 1426 aa30.8■■■□□ 2.52
CTF1-202ENST00000395019 TUBGCP6Q96RT7 1819 aa30.79■■■□□ 2.52
CTF1-202ENST00000395019 DDX58O95786 925 aaKnown RBP30.79■■■□□ 2.52
CTF1-202ENST00000395019 A1BGP04217 495 aa30.79■■■□□ 2.52
CTF1-202ENST00000395019 SLC27A3Q5K4L6 730 aa30.79■■■□□ 2.52
CTF1-202ENST00000395019 LRP10Q7Z4F1 713 aa30.79■■■□□ 2.52
CTF1-202ENST00000395019 SIRT2Q8IXJ6 389 aa30.79■■■□□ 2.52
CTF1-202ENST00000395019 GNAI3P08754 354 aa30.78■■■□□ 2.52
CTF1-202ENST00000395019 BEND3Q5T5X7 828 aa30.78■■■□□ 2.52
CTF1-202ENST00000395019 RPAP2Q8IXW5 612 aaPredicted RBP30.78■■■□□ 2.52
CTF1-202ENST00000395019 SRCIN1Q9C0H9 1055 aa30.78■■■□□ 2.52
CTF1-202ENST00000395019 PDZRN3Q9UPQ7 1066 aa30.77■■■□□ 2.52
CTF1-202ENST00000395019 ANKRD44Q8N8A2 993 aa30.76■■■□□ 2.52
CTF1-202ENST00000395019 UBR3Q6ZT12 1888 aa30.76■■■□□ 2.51
CTF1-202ENST00000395019 MYL6BP14649 208 aa30.76■■■□□ 2.51
CTF1-202ENST00000395019 CRKLP46109 303 aaKnown RBP30.76■■■□□ 2.51
CTF1-202ENST00000395019 MAP3K2Q9Y2U5 619 aa30.76■■■□□ 2.51
CTF1-202ENST00000395019 NBPF26B4DH59 902 aa30.75■■■□□ 2.51
CTF1-202ENST00000395019 NBPF14Q5TI25 921 aa30.75■■■□□ 2.51
CTF1-202ENST00000395019 NBPF10Q6P3W6 841 aaKnown RBP30.75■■■□□ 2.51
CTF1-202ENST00000395019 INTS5Q6P9B9 1019 aaKnown RBP30.75■■■□□ 2.51
CTF1-202ENST00000395019 NBPF15Q8N660 670 aa30.75■■■□□ 2.51
CTF1-202ENST00000395019 TEX13AQ9BXU3 409 aaPredicted RBP30.75■■■□□ 2.51
CTF1-202ENST00000395019 GNAI2P04899 355 aa30.74■■■□□ 2.51
CTF1-202ENST00000395019 CEP85Q6P2H3 762 aa30.74■■■□□ 2.51
CTF1-202ENST00000395019 ZBTB1Q9Y2K1 713 aa30.74■■■□□ 2.51
CTF1-202ENST00000395019 STARD3NLO95772 234 aa30.73■■■□□ 2.51
CTF1-202ENST00000395019 SMIM5Q71RC9 77 aa30.73■■■□□ 2.51
CTF1-202ENST00000395019 XAGE3Q8WTP9 111 aa30.73■■■□□ 2.51
CTF1-202ENST00000395019 GCC1Q96CN9 775 aa30.73■■■□□ 2.51
CTF1-202ENST00000395019 USP44Q9H0E7 712 aa30.73■■■□□ 2.51
CTF1-202ENST00000395019 AIMP1Q12904 312 aaKnown RBP30.73■■■□□ 2.51
CTF1-202ENST00000395019 AMIGO3Q86WK7 504 aa30.73■■■□□ 2.51
CTF1-202ENST00000395019 RGS3P49796 1198 aa30.72■■■□□ 2.51
CTF1-202ENST00000395019 COPS6Q7L5N1 327 aa30.72■■■□□ 2.51
CTF1-202ENST00000395019 ALDH1L1O75891 902 aa30.71■■■□□ 2.51
CTF1-202ENST00000395019 CCDC87Q9NVE4 849 aa30.71■■■□□ 2.51
CTF1-202ENST00000395019 CNTNAP4Q9C0A0 1308 aa30.71■■■□□ 2.51
CTF1-202ENST00000395019 ZNF827Q17R98 1081 aa30.7■■■□□ 2.51
CTF1-202ENST00000395019 ANO8Q9HCE9 1232 aaPredicted RBP30.69■■■□□ 2.5
CTF1-202ENST00000395019 RIC3Q7Z5B4 369 aa30.69■■■□□ 2.5
CTF1-202ENST00000395019 IBTKQ9P2D0 1353 aaPredicted RBP30.67■■■□□ 2.5
CTF1-202ENST00000395019 C4AP0C0L4 1744 aa30.67■■■□□ 2.5
CTF1-202ENST00000395019 UBTFL1P0CB47 393 aaPredicted RBP30.67■■■□□ 2.5
CTF1-202ENST00000395019 NUCB1Q02818 461 aa30.67■■■□□ 2.5
CTF1-202ENST00000395019 LINS1Q8NG48 757 aa30.67■■■□□ 2.5
CTF1-202ENST00000395019 ANKRD13DQ6ZTN6 518 aa30.66■■■□□ 2.5
CTF1-202ENST00000395019 DCTPP1Q9H773 170 aa30.66■■■□□ 2.5
CTF1-202ENST00000395019 RC3H1Q5TC82 1133 aaKnown RBP30.65■■■□□ 2.5
CTF1-202ENST00000395019 AKT1S1Q96B36 256 aa30.65■■■□□ 2.5
CTF1-202ENST00000395019 GNPATO15228 680 aa30.65■■■□□ 2.5
CTF1-202ENST00000395019 HMMRO75330 724 aa30.65■■■□□ 2.5
CTF1-202ENST00000395019 METTL22Q9BUU2 404 aaPredicted RBP30.64■■■□□ 2.5
CTF1-202ENST00000395019 AK7Q96M32 723 aa30.63■■■□□ 2.49
CTF1-202ENST00000395019 ZNF330Q9Y3S2 320 aaPredicted RBP30.63■■■□□ 2.49
CTF1-202ENST00000395019 LRRFIP2Q9Y608 721 aaKnown RBP30.63■■■□□ 2.49
CTF1-202ENST00000395019 PLBD2Q8NHP8 589 aa30.62■■■□□ 2.49
CTF1-202ENST00000395019 ATP8B2P98198 1209 aa30.62■■■□□ 2.49
CTF1-202ENST00000395019 NEXNQ0ZGT2 675 aa30.62■■■□□ 2.49
CTF1-202ENST00000395019 EIF5P55010 431 aaKnown RBP30.61■■■□□ 2.49
CTF1-202ENST00000395019 CHD1LQ86WJ1 897 aa30.61■■■□□ 2.49
CTF1-202ENST00000395019 QSER1Q2KHR3 1735 aa30.6■■■□□ 2.49
CTF1-202ENST00000395019 RPS6KA4O75676 772 aa30.6■■■□□ 2.49
CTF1-202ENST00000395019 NBPF7P0C2Y1 421 aaPredicted RBP30.6■■■□□ 2.49
CTF1-202ENST00000395019 CWF19L2Q2TBE0 894 aaKnown RBP30.6■■■□□ 2.49
CTF1-202ENST00000395019 RBM19Q9Y4C8 960 aaKnown RBP30.6■■■□□ 2.49
CTF1-202ENST00000395019 PHF14O94880 888 aa30.59■■■□□ 2.49
CTF1-202ENST00000395019 IGKV5-2P06315 115 aa30.59■■■□□ 2.49
CTF1-202ENST00000395019 IL6STP40189 918 aaPredicted RBP30.59■■■□□ 2.49
CTF1-202ENST00000395019 COL15A1P39059 1388 aa30.59■■■□□ 2.49
CTF1-202ENST00000395019 PDE4AP27815 886 aa30.58■■■□□ 2.49
CTF1-202ENST00000395019 ANKRD45Q5TZF3 282 aa30.58■■■□□ 2.49
CTF1-202ENST00000395019 TTLL7Q6ZT98 887 aa30.58■■■□□ 2.49
CTF1-202ENST00000395019 HDAC5Q9UQL6 1122 aa30.58■■■□□ 2.49
CTF1-202ENST00000395019 BCORQ6W2J9 1755 aa30.58■■■□□ 2.49
CTF1-202ENST00000395019 UTYO14607 1347 aa30.58■■■□□ 2.49
CTF1-202ENST00000395019 C9orf78Q9NZ63 289 aaPredicted RBP30.58■■■□□ 2.49
CTF1-202ENST00000395019 ARFGEF2Q9Y6D5 1785 aa30.58■■■□□ 2.49
CTF1-202ENST00000395019 NEURL1BA8MQ27 555 aa30.57■■■□□ 2.48
CTF1-202ENST00000395019 MYD88Q99836 296 aa30.57■■■□□ 2.48
CTF1-202ENST00000395019 RTCBQ9Y3I0 505 aaKnown RBP30.57■■■□□ 2.48
CTF1-202ENST00000395019 BACH2Q9BYV9 841 aa30.56■■■□□ 2.48
CTF1-202ENST00000395019 LNPKQ9C0E8 428 aa30.56■■■□□ 2.48
CTF1-202ENST00000395019 GRM8O00222 908 aa30.55■■■□□ 2.48
CTF1-202ENST00000395019 SLC15A2Q16348 729 aa30.55■■■□□ 2.48
CTF1-202ENST00000395019 TFCP2L1Q9NZI6 479 aa30.55■■■□□ 2.48
CTF1-202ENST00000395019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.55■■■□□ 2.48
CTF1-202ENST00000395019 NUP98P52948 1817 aa30.54■■■□□ 2.48
CTF1-202ENST00000395019 SCN7AQ01118 1682 aa30.54■■■□□ 2.48
CTF1-202ENST00000395019 PNMA6EA0A0J9YXQ4 647 aa30.54■■■□□ 2.48
CTF1-202ENST00000395019 TBC1D2BQ9UPU7 963 aa30.54■■■□□ 2.48
CTF1-202ENST00000395019 GCKRQ14397 625 aa30.53■■■□□ 2.48
CTF1-202ENST00000395019 ARHGEF1Q92888 912 aaKnown RBP30.53■■■□□ 2.48
CTF1-202ENST00000395019 STK32BQ9NY57 414 aa30.53■■■□□ 2.48
CTF1-202ENST00000395019 PNPLA7Q6ZV29 1317 aa30.52■■■□□ 2.48
CTF1-202ENST00000395019 FAM161AQ3B820 660 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms