RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 QTRT2Q9H974 415 aaKnown RBP26.46■■□□□ 1.83
SPHK1-202ENST00000392496 UPF2Q9HAU5 1272 aaKnown RBP26.46■■□□□ 1.83
SPHK1-202ENST00000392496 APBB1O00213 710 aa26.46■■□□□ 1.83
SPHK1-202ENST00000392496 C16orf71Q8IYS4 520 aaPredicted RBP26.46■■□□□ 1.83
SPHK1-202ENST00000392496 PLBD2Q8NHP8 589 aa26.46■■□□□ 1.83
SPHK1-202ENST00000392496 LRRCC1Q9C099 1032 aa26.46■■□□□ 1.83
SPHK1-202ENST00000392496 ATG3Q9NT62 314 aa26.46■■□□□ 1.83
SPHK1-202ENST00000392496 NEURL1BA8MQ27 555 aa26.45■■□□□ 1.82
SPHK1-202ENST00000392496 DDB1Q16531 1140 aa26.45■■□□□ 1.82
SPHK1-202ENST00000392496 ASAP1Q9ULH1 1129 aa26.45■■□□□ 1.82
SPHK1-202ENST00000392496 MYD88Q99836 296 aa26.44■■□□□ 1.82
SPHK1-202ENST00000392496 SRGAP3O43295 1099 aa26.43■■□□□ 1.82
SPHK1-202ENST00000392496 RAB11FIP3O75154 756 aa26.43■■□□□ 1.82
SPHK1-202ENST00000392496 TTC22Q5TAA0 569 aa26.43■■□□□ 1.82
SPHK1-202ENST00000392496 A1BGP04217 495 aa26.42■■□□□ 1.82
SPHK1-202ENST00000392496 GCKRQ14397 625 aa26.42■■□□□ 1.82
SPHK1-202ENST00000392496 DOT1LQ8TEK3 1739 aa26.42■■□□□ 1.82
SPHK1-202ENST00000392496 GJD4Q96KN9 370 aaPredicted RBP26.41■■□□□ 1.82
SPHK1-202ENST00000392496 OSBPL3Q9H4L5 887 aa26.41■■□□□ 1.82
SPHK1-202ENST00000392496 AFDNP55196 1824 aaKnown RBP26.41■■□□□ 1.82
SPHK1-202ENST00000392496 OTUD7AQ8TE49 926 aaPredicted RBP26.41■■□□□ 1.82
SPHK1-202ENST00000392496 NUP188Q5SRE5 1749 aa26.4■■□□□ 1.82
SPHK1-202ENST00000392496 GSPT1P15170 499 aaKnown RBP26.4■■□□□ 1.82
SPHK1-202ENST00000392496 HSP90AB4PQ58FF6 505 aa26.39■■□□□ 1.82
SPHK1-202ENST00000392496 SUCLG2Q96I99 432 aa26.39■■□□□ 1.82
SPHK1-202ENST00000392496 NOP58Q9Y2X3 529 aaKnown RBP26.39■■□□□ 1.82
SPHK1-202ENST00000392496 ATRNO75882 1429 aa26.39■■□□□ 1.82
SPHK1-202ENST00000392496 SURF6O75683 361 aaKnown RBP26.38■■□□□ 1.81
SPHK1-202ENST00000392496 TBC1D32Q96NH3 1257 aa26.38■■□□□ 1.81
SPHK1-202ENST00000392496 SALL3Q9BXA9 1300 aa26.38■■□□□ 1.81
SPHK1-202ENST00000392496 STARD3NLO95772 234 aa26.37■■□□□ 1.81
SPHK1-202ENST00000392496 RBM6P78332 1123 aaKnown RBP26.37■■□□□ 1.81
SPHK1-202ENST00000392496 DNAJC10Q8IXB1 793 aa26.37■■□□□ 1.81
SPHK1-202ENST00000392496 KAZALD1Q96I82 304 aa26.37■■□□□ 1.81
SPHK1-202ENST00000392496 COL15A1P39059 1388 aa26.36■■□□□ 1.81
SPHK1-202ENST00000392496 A0A0G2JS52 829 aa26.36■■□□□ 1.81
SPHK1-202ENST00000392496 PRIM1P49642 420 aaKnown RBP26.36■■□□□ 1.81
SPHK1-202ENST00000392496 MYT1Q01538 1121 aa26.36■■□□□ 1.81
SPHK1-202ENST00000392496 TTLL7Q6ZT98 887 aa26.36■■□□□ 1.81
SPHK1-202ENST00000392496 RBM42Q9BTD8 480 aaKnown RBP26.36■■□□□ 1.81
SPHK1-202ENST00000392496 RXRBP28702 533 aa26.35■■□□□ 1.81
SPHK1-202ENST00000392496 PDE1AP54750 535 aa26.35■■□□□ 1.81
SPHK1-202ENST00000392496 CDC45O75419 566 aa26.35■■□□□ 1.81
SPHK1-202ENST00000392496 MARCH10Q8NA82 808 aaPredicted RBP26.35■■□□□ 1.81
SPHK1-202ENST00000392496 SYTL4Q96C24 671 aaPredicted RBP26.35■■□□□ 1.81
SPHK1-202ENST00000392496 KIF1BPQ96EK5 621 aa26.35■■□□□ 1.81
SPHK1-202ENST00000392496 BCL11AQ9H165 835 aa26.35■■□□□ 1.81
SPHK1-202ENST00000392496 KAT6BQ8WYB5 2073 aa26.34■■□□□ 1.81
SPHK1-202ENST00000392496 RHPN1Q8TCX5 695 aa26.34■■□□□ 1.81
SPHK1-202ENST00000392496 BICC1Q9H694 974 aaKnown RBP26.34■■□□□ 1.81
SPHK1-202ENST00000392496 EIF5BO60841 1220 aaKnown RBP26.33■■□□□ 1.81
SPHK1-202ENST00000392496 MFAP1P55081 439 aaKnown RBP26.33■■□□□ 1.81
SPHK1-202ENST00000392496 TBC1D9Q6ZT07 1266 aa26.33■■□□□ 1.8
SPHK1-202ENST00000392496 STAP2Q9UGK3 403 aa26.33■■□□□ 1.8
SPHK1-202ENST00000392496 FAM98CQ17RN3 349 aaKnown RBP26.32■■□□□ 1.8
SPHK1-202ENST00000392496 ERICH6Q7L0X2 663 aa26.32■■□□□ 1.8
SPHK1-202ENST00000392496 MX1P20591 662 aa26.31■■□□□ 1.8
SPHK1-202ENST00000392496 SLC4A9Q96Q91 983 aa26.31■■□□□ 1.8
SPHK1-202ENST00000392496 AOX1Q06278 1338 aa26.31■■□□□ 1.8
SPHK1-202ENST00000392496 ATP5J2-PTCD1G3V325 749 aa26.3■■□□□ 1.8
SPHK1-202ENST00000392496 TJP1Q07157 1748 aa26.3■■□□□ 1.8
SPHK1-202ENST00000392496 ERC1Q8IUD2 1116 aa26.3■■□□□ 1.8
SPHK1-202ENST00000392496 C22orf23Q9BZE7 217 aa26.3■■□□□ 1.8
SPHK1-202ENST00000392496 A0A087WZG4 1122 aa26.29■■□□□ 1.8
SPHK1-202ENST00000392496 CYP19A1P11511 503 aaPredicted RBP26.29■■□□□ 1.8
SPHK1-202ENST00000392496 SDSP20132 328 aa26.29■■□□□ 1.8
SPHK1-202ENST00000392496 CASP7P55210 303 aa26.28■■□□□ 1.8
SPHK1-202ENST00000392496 IL1RAPL2Q9NP60 686 aa26.28■■□□□ 1.8
SPHK1-202ENST00000392496 CWC25Q9NXE8 425 aaPredicted RBP26.28■■□□□ 1.8
SPHK1-202ENST00000392496 RGS17Q9UGC6 210 aaPredicted RBP26.28■■□□□ 1.8
SPHK1-202ENST00000392496 TUBGCP6Q96RT7 1819 aa26.28■■□□□ 1.8
SPHK1-202ENST00000392496 CCDC191Q8NCU4 936 aa26.28■■□□□ 1.8
SPHK1-202ENST00000392496 ZBTB3Q9H5J0 574 aa26.28■■□□□ 1.8
SPHK1-202ENST00000392496 H7C1W4 665 aa26.27■■□□□ 1.8
SPHK1-202ENST00000392496 OS9Q13438 667 aaPredicted RBP26.27■■□□□ 1.8
SPHK1-202ENST00000392496 UBE3BQ7Z3V4 1068 aa26.27■■□□□ 1.8
SPHK1-202ENST00000392496 RABL6Q3YEC7 729 aaPredicted RBP26.26■■□□□ 1.79
SPHK1-202ENST00000392496 KIF6Q6ZMV9 814 aa26.26■■□□□ 1.79
SPHK1-202ENST00000392496 EPHA10Q5JZY3 1008 aa26.25■■□□□ 1.79
SPHK1-202ENST00000392496 ONECUT3O60422 494 aaPredicted RBP26.25■■□□□ 1.79
SPHK1-202ENST00000392496 ACSBG1Q96GR2 724 aa26.25■■□□□ 1.79
SPHK1-202ENST00000392496 ISCA1Q9BUE6 129 aa26.25■■□□□ 1.79
SPHK1-202ENST00000392496 PA2G4Q9UQ80 394 aaKnown RBP26.25■■□□□ 1.79
SPHK1-202ENST00000392496 CICQ96RK0 1608 aaPredicted RBP26.25■■□□□ 1.79
SPHK1-202ENST00000392496 TCIRG1Q13488 830 aa26.24■■□□□ 1.79
SPHK1-202ENST00000392496 POTEAQ6S8J7 498 aa26.24■■□□□ 1.79
SPHK1-202ENST00000392496 TRIM28Q13263 835 aaKnown RBP26.23■■□□□ 1.79
SPHK1-202ENST00000392496 CASC1Q6TDU7 716 aa26.23■■□□□ 1.79
SPHK1-202ENST00000392496 RBM25P49756 843 aaKnown RBP26.23■■□□□ 1.79
SPHK1-202ENST00000392496 G3BP1Q13283 466 aaKnown RBP eCLIP26.23■■□□□ 1.79
SPHK1-202ENST00000392496 SEPT12Q8IYM1 358 aa26.22■■□□□ 1.79
SPHK1-202ENST00000392496 CLASRPQ8N2M8 674 aaKnown RBP26.22■■□□□ 1.79
SPHK1-202ENST00000392496 DAXXQ9UER7 740 aaPredicted RBP26.22■■□□□ 1.79
SPHK1-202ENST00000392496 ZNF330Q9Y3S2 320 aaPredicted RBP26.22■■□□□ 1.79
SPHK1-202ENST00000392496 MAP3K15Q6ZN16 1313 aa26.22■■□□□ 1.79
SPHK1-202ENST00000392496 NUTM1Q86Y26 1132 aa26.21■■□□□ 1.79
SPHK1-202ENST00000392496 JARID2Q92833 1246 aaPredicted RBP26.21■■□□□ 1.79
SPHK1-202ENST00000392496 COPRSQ9NQ92 184 aa26.21■■□□□ 1.79
SPHK1-202ENST00000392496 USP42Q9H9J4 1324 aaKnown RBP26.21■■□□□ 1.79
SPHK1-202ENST00000392496 IL6STP40189 918 aaPredicted RBP26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms