RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ANP32BQ92688 251 aaKnown RBP23.37■■□□□ 1.33
CCDC50-202ENST00000392456 KIF20AO95235 890 aa23.36■■□□□ 1.33
CCDC50-202ENST00000392456 MARCH10Q8NA82 808 aaPredicted RBP23.36■■□□□ 1.33
CCDC50-202ENST00000392456 PDZRN3Q9UPQ7 1066 aa23.36■■□□□ 1.33
CCDC50-202ENST00000392456 TNS2Q63HR2 1409 aa23.36■■□□□ 1.33
CCDC50-202ENST00000392456 LRP10Q7Z4F1 713 aa23.35■■□□□ 1.33
CCDC50-202ENST00000392456 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
CCDC50-202ENST00000392456 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
CCDC50-202ENST00000392456 KCPQ6ZWJ8 1503 aa23.34■■□□□ 1.33
CCDC50-202ENST00000392456 BARGINQ6ZT62 677 aa23.34■■□□□ 1.33
CCDC50-202ENST00000392456 DNAAF4Q8WXU2 420 aa23.34■■□□□ 1.33
CCDC50-202ENST00000392456 ATG3Q9NT62 314 aa23.34■■□□□ 1.33
CCDC50-202ENST00000392456 HYPKQ9NX55 129 aa23.34■■□□□ 1.33
CCDC50-202ENST00000392456 WNK3Q9BYP7 1800 aa23.34■■□□□ 1.33
CCDC50-202ENST00000392456 PRIM1P49642 420 aaKnown RBP23.34■■□□□ 1.33
CCDC50-202ENST00000392456 VPS72Q15906 364 aa23.34■■□□□ 1.33
CCDC50-202ENST00000392456 CDCA7Q9BWT1 371 aaPredicted RBP23.34■■□□□ 1.33
CCDC50-202ENST00000392456 USP21Q9UK80 565 aa23.34■■□□□ 1.33
CCDC50-202ENST00000392456 FAM161AQ3B820 660 aa23.33■■□□□ 1.33
CCDC50-202ENST00000392456 C8orf34Q49A92 452 aa23.33■■□□□ 1.33
CCDC50-202ENST00000392456 BEND3Q5T5X7 828 aa23.33■■□□□ 1.32
CCDC50-202ENST00000392456 SMC5Q8IY18 1101 aa23.33■■□□□ 1.32
CCDC50-202ENST00000392456 TRIM44Q96DX7 344 aaPredicted RBP23.33■■□□□ 1.32
CCDC50-202ENST00000392456 USP44Q9H0E7 712 aa23.33■■□□□ 1.32
CCDC50-202ENST00000392456 MAP3K2Q9Y2U5 619 aa23.33■■□□□ 1.32
CCDC50-202ENST00000392456 ATP10DQ9P241 1426 aa23.32■■□□□ 1.32
CCDC50-202ENST00000392456 NBPF26B4DH59 902 aa23.32■■□□□ 1.32
CCDC50-202ENST00000392456 NBPF14Q5TI25 921 aa23.32■■□□□ 1.32
CCDC50-202ENST00000392456 NBPF10Q6P3W6 841 aaKnown RBP23.32■■□□□ 1.32
CCDC50-202ENST00000392456 COPS6Q7L5N1 327 aa23.32■■□□□ 1.32
CCDC50-202ENST00000392456 NBPF15Q8N660 670 aa23.32■■□□□ 1.32
CCDC50-202ENST00000392456 XAGE3Q8WTP9 111 aa23.32■■□□□ 1.32
CCDC50-202ENST00000392456 ACSBG1Q96GR2 724 aa23.32■■□□□ 1.32
CCDC50-202ENST00000392456 A1BGP04217 495 aa23.31■■□□□ 1.32
CCDC50-202ENST00000392456 CEP85Q6P2H3 762 aa23.31■■□□□ 1.32
CCDC50-202ENST00000392456 KSR2Q6VAB6 950 aa23.31■■□□□ 1.32
CCDC50-202ENST00000392456 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.31■■□□□ 1.32
CCDC50-202ENST00000392456 SECISBP2LQ93073 1101 aaKnown RBP23.31■■□□□ 1.32
CCDC50-202ENST00000392456 ITGB4P16144 1822 aa23.3■■□□□ 1.32
CCDC50-202ENST00000392456 BCL9O00512 1426 aa23.3■■□□□ 1.32
CCDC50-202ENST00000392456 SRCIN1Q9C0H9 1055 aa23.3■■□□□ 1.32
CCDC50-202ENST00000392456 GRPEL1Q9HAV7 217 aa23.3■■□□□ 1.32
CCDC50-202ENST00000392456 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
CCDC50-202ENST00000392456 MEX3CQ5U5Q3 659 aaKnown RBP23.29■■□□□ 1.32
CCDC50-202ENST00000392456 SLC4A9Q96Q91 983 aa23.29■■□□□ 1.32
CCDC50-202ENST00000392456 PAPPAQ13219 1627 aa23.29■■□□□ 1.32
CCDC50-202ENST00000392456 A0A0G2JS52 829 aa23.28■■□□□ 1.32
CCDC50-202ENST00000392456 ANKRD44Q8N8A2 993 aa23.28■■□□□ 1.32
CCDC50-202ENST00000392456 GTPBP4Q9BZE4 634 aaKnown RBP23.28■■□□□ 1.32
CCDC50-202ENST00000392456 CWF19L2Q2TBE0 894 aaKnown RBP23.28■■□□□ 1.32
CCDC50-202ENST00000392456 RBM42Q9BTD8 480 aaKnown RBP23.28■■□□□ 1.32
CCDC50-202ENST00000392456 NBPF7P0C2Y1 421 aaPredicted RBP23.27■■□□□ 1.32
CCDC50-202ENST00000392456 PXDNLA1KZ92 1463 aa23.26■■□□□ 1.31
CCDC50-202ENST00000392456 DNAJC10Q8IXB1 793 aa23.26■■□□□ 1.31
CCDC50-202ENST00000392456 KCNQ2O43526 872 aa23.25■■□□□ 1.31
CCDC50-202ENST00000392456 LETM1O95202 739 aaPredicted RBP23.25■■□□□ 1.31
CCDC50-202ENST00000392456 GNAI2P04899 355 aa23.25■■□□□ 1.31
CCDC50-202ENST00000392456 LRRFIP2Q9Y608 721 aaKnown RBP23.25■■□□□ 1.31
CCDC50-202ENST00000392456 AFF2P51816 1311 aa23.25■■□□□ 1.31
CCDC50-202ENST00000392456 RPAP2Q8IXW5 612 aaPredicted RBP23.24■■□□□ 1.31
CCDC50-202ENST00000392456 CCDC94Q9BW85 323 aaPredicted RBP23.24■■□□□ 1.31
CCDC50-202ENST00000392456 ISY1Q9ULR0 285 aaKnown RBP23.24■■□□□ 1.31
CCDC50-202ENST00000392456 GNAI3P08754 354 aa23.24■■□□□ 1.31
CCDC50-202ENST00000392456 RIC3Q7Z5B4 369 aa23.24■■□□□ 1.31
CCDC50-202ENST00000392456 LNPKQ9C0E8 428 aa23.24■■□□□ 1.31
CCDC50-202ENST00000392456 GZF1Q9H116 711 aaPredicted RBP23.24■■□□□ 1.31
CCDC50-202ENST00000392456 ANTXR1Q9H6X2 564 aa23.24■■□□□ 1.31
CCDC50-202ENST00000392456 IGKV5-2P06315 115 aa23.23■■□□□ 1.31
CCDC50-202ENST00000392456 NUCB1Q02818 461 aa23.23■■□□□ 1.31
CCDC50-202ENST00000392456 FAM182BQ5T319 152 aa23.23■■□□□ 1.31
CCDC50-202ENST00000392456 ANKRD13DQ6ZTN6 518 aa23.23■■□□□ 1.31
CCDC50-202ENST00000392456 PNMA6EA0A0J9YXQ4 647 aa23.22■■□□□ 1.31
CCDC50-202ENST00000392456 DDX58O95786 925 aaKnown RBP23.22■■□□□ 1.31
CCDC50-202ENST00000392456 ANKRD45Q5TZF3 282 aa23.22■■□□□ 1.31
CCDC50-202ENST00000392456 TTLL7Q6ZT98 887 aa23.22■■□□□ 1.31
CCDC50-202ENST00000392456 DOT1LQ8TEK3 1739 aa23.22■■□□□ 1.31
CCDC50-202ENST00000392456 EP400Q96L91 3159 aa23.22■■□□□ 1.31
CCDC50-202ENST00000392456 UBTFL1P0CB47 393 aaPredicted RBP23.22■■□□□ 1.31
CCDC50-202ENST00000392456 PTF1AQ7RTS3 328 aa23.21■■□□□ 1.31
CCDC50-202ENST00000392456 ARID3AQ99856 593 aa23.21■■□□□ 1.31
CCDC50-202ENST00000392456 DCTPP1Q9H773 170 aa23.21■■□□□ 1.31
CCDC50-202ENST00000392456 GCC1Q96CN9 775 aa23.2■■□□□ 1.3
CCDC50-202ENST00000392456 LAMB4A4D0S4 1761 aa23.2■■□□□ 1.3
CCDC50-202ENST00000392456 N4BP2Q86UW6 1770 aaPredicted RBP23.2■■□□□ 1.3
CCDC50-202ENST00000392456 CHD1LQ86WJ1 897 aa23.2■■□□□ 1.3
CCDC50-202ENST00000392456 GJD4Q96KN9 370 aaPredicted RBP23.2■■□□□ 1.3
CCDC50-202ENST00000392456 TAF3Q5VWG9 929 aa23.19■■□□□ 1.3
CCDC50-202ENST00000392456 LINS1Q8NG48 757 aa23.19■■□□□ 1.3
CCDC50-202ENST00000392456 MYD88Q99836 296 aa23.19■■□□□ 1.3
CCDC50-202ENST00000392456 APBB1O00213 710 aa23.18■■□□□ 1.3
CCDC50-202ENST00000392456 DYNC1I1O14576 645 aa23.18■■□□□ 1.3
CCDC50-202ENST00000392456 METTL22Q9BUU2 404 aaPredicted RBP23.18■■□□□ 1.3
CCDC50-202ENST00000392456 SLKQ9H2G2 1235 aaPredicted RBP23.18■■□□□ 1.3
CCDC50-202ENST00000392456 ZNF330Q9Y3S2 320 aaPredicted RBP23.18■■□□□ 1.3
CCDC50-202ENST00000392456 ZSCAN30Q86W11 494 aa23.17■■□□□ 1.3
CCDC50-202ENST00000392456 UQCRHLA0A096LP55 91 aa23.17■■□□□ 1.3
CCDC50-202ENST00000392456 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
CCDC50-202ENST00000392456 ALDH1L1O75891 902 aa23.17■■□□□ 1.3
CCDC50-202ENST00000392456 UQCRHP07919 91 aa23.17■■□□□ 1.3
CCDC50-202ENST00000392456 MCM4P33991 863 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms