RNA–Protein interactions for RNA: ENST00000392347.5

CCDC57-206, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-206ENST00000392347 KIAA0232Q92628 1395 aa15.97■□□□□ 0.15
CCDC57-206ENST00000392347 ARHGEF28Q8N1W1 1705 aaKnown RBP15.96■□□□□ 0.15
CCDC57-206ENST00000392347 COL9A3Q14050 684 aaPredicted RBP15.96■□□□□ 0.15
CCDC57-206ENST00000392347 RAD50Q92878 1312 aa15.96■□□□□ 0.15
CCDC57-206ENST00000392347 MLH3Q9UHC1 1453 aa15.96■□□□□ 0.15
CCDC57-206ENST00000392347 FOXO3O43524 673 aa15.96■□□□□ 0.15
CCDC57-206ENST00000392347 CAPN2P17655 700 aa15.96■□□□□ 0.15
CCDC57-206ENST00000392347 PTPN14Q15678 1187 aa15.96■□□□□ 0.15
CCDC57-206ENST00000392347 FBXW7Q969H0 707 aa15.96■□□□□ 0.15
CCDC57-206ENST00000392347 TRIM34Q9BYJ4 488 aa15.96■□□□□ 0.15
CCDC57-206ENST00000392347 PDRG1Q9NUG6 133 aa15.96■□□□□ 0.15
CCDC57-206ENST00000392347 HECW2Q9P2P5 1572 aa15.95■□□□□ 0.14
CCDC57-206ENST00000392347 SGSM2O43147 1006 aa15.95■□□□□ 0.14
CCDC57-206ENST00000392347 CCT4P50991 539 aaKnown RBP15.95■□□□□ 0.14
CCDC57-206ENST00000392347 PRPF40BQ6NWY9 871 aaKnown RBP15.95■□□□□ 0.14
CCDC57-206ENST00000392347 PLA2G4DQ86XP0 818 aa15.95■□□□□ 0.14
CCDC57-206ENST00000392347 ZBTB9Q96C00 473 aa15.95■□□□□ 0.14
CCDC57-206ENST00000392347 ME3Q16798 604 aa15.95■□□□□ 0.14
CCDC57-206ENST00000392347 LSG1Q9H089 658 aaKnown RBP15.95■□□□□ 0.14
CCDC57-206ENST00000392347 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
CCDC57-206ENST00000392347 NR1I2O75469 434 aa15.94■□□□□ 0.14
CCDC57-206ENST00000392347 SURF6O75683 361 aaKnown RBP15.94■□□□□ 0.14
CCDC57-206ENST00000392347 KRT85P78386 507 aa15.94■□□□□ 0.14
CCDC57-206ENST00000392347 ST3GAL1Q11201 340 aa15.94■□□□□ 0.14
CCDC57-206ENST00000392347 ATP8B2P98198 1209 aa15.94■□□□□ 0.14
CCDC57-206ENST00000392347 ZNF446Q9NWS9 450 aa15.94■□□□□ 0.14
CCDC57-206ENST00000392347 SKILP12757 684 aa15.94■□□□□ 0.14
CCDC57-206ENST00000392347 PTH1RQ03431 593 aa15.94■□□□□ 0.14
CCDC57-206ENST00000392347 STAP2Q9UGK3 403 aa15.94■□□□□ 0.14
CCDC57-206ENST00000392347 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
CCDC57-206ENST00000392347 LRRC8AQ8IWT6 810 aa15.93■□□□□ 0.14
CCDC57-206ENST00000392347 BICD2Q8TD16 824 aa15.93■□□□□ 0.14
CCDC57-206ENST00000392347 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
CCDC57-206ENST00000392347 SPATA32Q96LK8 384 aa15.93■□□□□ 0.14
CCDC57-206ENST00000392347 SSH2Q76I76 1423 aa15.93■□□□□ 0.14
CCDC57-206ENST00000392347 CEBPZQ03701 1054 aaKnown RBP15.92■□□□□ 0.14
CCDC57-206ENST00000392347 ERCC6LQ2NKX8 1250 aa15.92■□□□□ 0.14
CCDC57-206ENST00000392347 LRRN4CLQ8ND94 238 aa15.92■□□□□ 0.14
CCDC57-206ENST00000392347 PIK3C2BO00750 1634 aa15.92■□□□□ 0.14
CCDC57-206ENST00000392347 MAP2P11137 1827 aaKnown RBP15.92■□□□□ 0.14
CCDC57-206ENST00000392347 HNRNPH2P55795 449 aaKnown RBP15.92■□□□□ 0.14
CCDC57-206ENST00000392347 STK3Q13188 491 aa15.92■□□□□ 0.14
CCDC57-206ENST00000392347 COG3Q96JB2 828 aa15.92■□□□□ 0.14
CCDC57-206ENST00000392347 ZFP91Q96JP5 570 aaPredicted RBP15.92■□□□□ 0.14
CCDC57-206ENST00000392347 NOL10Q9BSC4 688 aaKnown RBP15.92■□□□□ 0.14
CCDC57-206ENST00000392347 SIGLEC1Q9BZZ2 1709 aa15.91■□□□□ 0.14
CCDC57-206ENST00000392347 TPCN1Q9ULQ1 816 aa15.91■□□□□ 0.14
CCDC57-206ENST00000392347 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
CCDC57-206ENST00000392347 POLR3GO15318 223 aaPredicted RBP15.9■□□□□ 0.14
CCDC57-206ENST00000392347 CALCOCO1Q9P1Z2 691 aa15.9■□□□□ 0.14
CCDC57-206ENST00000392347 GOLGA6L19H0YKK7 550 aa15.9■□□□□ 0.14
CCDC57-206ENST00000392347 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
CCDC57-206ENST00000392347 TDRD7Q8NHU6 1098 aaKnown RBP15.9■□□□□ 0.14
CCDC57-206ENST00000392347 ERCC4Q92889 916 aaPredicted RBP15.9■□□□□ 0.14
CCDC57-206ENST00000392347 IL17RAQ96F46 866 aa15.9■□□□□ 0.14
CCDC57-206ENST00000392347 DDX11Q96FC9 970 aa15.9■□□□□ 0.14
CCDC57-206ENST00000392347 STK31Q9BXU1 1019 aa15.9■□□□□ 0.14
CCDC57-206ENST00000392347 CYP46A1Q9Y6A2 500 aa15.9■□□□□ 0.14
CCDC57-206ENST00000392347 CCDC69A6NI79 296 aa15.89■□□□□ 0.13
CCDC57-206ENST00000392347 GNAI3P08754 354 aa15.89■□□□□ 0.13
CCDC57-206ENST00000392347 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
CCDC57-206ENST00000392347 PI4K2BQ8TCG2 481 aa15.89■□□□□ 0.13
CCDC57-206ENST00000392347 FLIIQ13045 1269 aa15.89■□□□□ 0.13
CCDC57-206ENST00000392347 CPSF1Q10570 1443 aaKnown RBP15.89■□□□□ 0.13
CCDC57-206ENST00000392347 NUTM2FA1L443 756 aa15.89■□□□□ 0.13
CCDC57-206ENST00000392347 C11orf57Q6ZUT1 292 aaPredicted RBP15.89■□□□□ 0.13
CCDC57-206ENST00000392347 DNAJC2Q99543 621 aaKnown RBP15.89■□□□□ 0.13
CCDC57-206ENST00000392347 CDC42BPGQ6DT37 1551 aa15.88■□□□□ 0.13
CCDC57-206ENST00000392347 LARP1Q6PKG0 1096 aaKnown RBP15.88■□□□□ 0.13
CCDC57-206ENST00000392347 PPP1R42Q7Z4L9 355 aa15.88■□□□□ 0.13
CCDC57-206ENST00000392347 NEK11Q8NG66 645 aa15.88■□□□□ 0.13
CCDC57-206ENST00000392347 ERO1AQ96HE7 468 aa15.88■□□□□ 0.13
CCDC57-206ENST00000392347 ERBB3P21860 1342 aa15.88■□□□□ 0.13
CCDC57-206ENST00000392347 SLU7O95391 586 aaKnown RBP15.88■□□□□ 0.13
CCDC57-206ENST00000392347 FOSBP53539 338 aa15.88■□□□□ 0.13
CCDC57-206ENST00000392347 CNTROBQ8N137 903 aa15.88■□□□□ 0.13
CCDC57-206ENST00000392347 LEO1Q8WVC0 666 aaPredicted RBP15.88■□□□□ 0.13
CCDC57-206ENST00000392347 PGBD1Q96JS3 809 aa15.88■□□□□ 0.13
CCDC57-206ENST00000392347 UBTFL1P0CB47 393 aaPredicted RBP15.87■□□□□ 0.13
CCDC57-206ENST00000392347 NYAP1Q6ZVC0 841 aa15.87■□□□□ 0.13
CCDC57-206ENST00000392347 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.87■□□□□ 0.13
CCDC57-206ENST00000392347 RHPN1Q8TCX5 695 aa15.87■□□□□ 0.13
CCDC57-206ENST00000392347 CLSTN2Q9H4D0 955 aa15.87■□□□□ 0.13
CCDC57-206ENST00000392347 PTPRMP28827 1452 aa15.87■□□□□ 0.13
CCDC57-206ENST00000392347 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
CCDC57-206ENST00000392347 HSP90AB2PQ58FF8 381 aa15.86■□□□□ 0.13
CCDC57-206ENST00000392347 VPS53Q5VIR6 699 aa15.86■□□□□ 0.13
CCDC57-206ENST00000392347 PAXIP1Q6ZW49 1069 aaPredicted RBP15.86■□□□□ 0.13
CCDC57-206ENST00000392347 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
CCDC57-206ENST00000392347 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
CCDC57-206ENST00000392347 CCDC171Q6TFL3 1326 aa15.86■□□□□ 0.13
CCDC57-206ENST00000392347 BECN2A8MW95 431 aa15.86■□□□□ 0.13
CCDC57-206ENST00000392347 SRGAP3O43295 1099 aa15.86■□□□□ 0.13
CCDC57-206ENST00000392347 DDX19AQ9NUU7 478 aaKnown RBP15.86■□□□□ 0.13
CCDC57-206ENST00000392347 FAM53CQ9NYF3 392 aa15.86■□□□□ 0.13
CCDC57-206ENST00000392347 SYT10Q6XYQ8 523 aa15.85■□□□□ 0.13
CCDC57-206ENST00000392347 CCAR2Q8N163 923 aaKnown RBP15.85■□□□□ 0.13
CCDC57-206ENST00000392347 TMX1Q9H3N1 280 aa15.85■□□□□ 0.13
CCDC57-206ENST00000392347 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
CCDC57-206ENST00000392347 CLCN6P51797 869 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms