RNA–Protein interactions for RNA: ENST00000391857.8

RPL13A-201, Transcript of ribosomal protein L13a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13A, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-201ENST00000391857 MORC1Q86VD1 984 aa19.6■□□□□ 0.73
RPL13A-201ENST00000391857 CNBD1Q8NA66 436 aa19.6■□□□□ 0.73
RPL13A-201ENST00000391857 SETDB2Q96T68 719 aa19.6■□□□□ 0.73
RPL13A-201ENST00000391857 CCDC93Q567U6 631 aa19.59■□□□□ 0.73
RPL13A-201ENST00000391857 PANK3Q9H999 370 aa19.59■□□□□ 0.73
RPL13A-201ENST00000391857 ABT1Q9ULW3 272 aaKnown RBP19.59■□□□□ 0.73
RPL13A-201ENST00000391857 SLX4Q8IY92 1834 aa19.58■□□□□ 0.73
RPL13A-201ENST00000391857 CAMTA2O94983 1202 aa19.58■□□□□ 0.72
RPL13A-201ENST00000391857 IL6STP40189 918 aaPredicted RBP19.58■□□□□ 0.72
RPL13A-201ENST00000391857 FKBP4Q02790 459 aaKnown RBP eCLIP19.58■□□□□ 0.72
RPL13A-201ENST00000391857 MTHFSDQ2M296 383 aaKnown RBP19.58■□□□□ 0.72
RPL13A-201ENST00000391857 ZNF277Q9NRM2 450 aaPredicted RBP19.58■□□□□ 0.72
RPL13A-201ENST00000391857 SCN4AP35499 1836 aa19.58■□□□□ 0.72
RPL13A-201ENST00000391857 COL11A2P13942 1736 aaPredicted RBP19.57■□□□□ 0.72
RPL13A-201ENST00000391857 ST5P78524 1137 aa19.57■□□□□ 0.72
RPL13A-201ENST00000391857 ZNF496Q96IT1 587 aaPredicted RBP19.57■□□□□ 0.72
RPL13A-201ENST00000391857 ZNF330Q9Y3S2 320 aaPredicted RBP19.57■□□□□ 0.72
RPL13A-201ENST00000391857 RNF123Q5XPI4 1314 aa19.56■□□□□ 0.72
RPL13A-201ENST00000391857 FZD9O00144 591 aa19.56■□□□□ 0.72
RPL13A-201ENST00000391857 NPHP1O15259 732 aa19.56■□□□□ 0.72
RPL13A-201ENST00000391857 TTC5Q8N0Z6 440 aa19.56■□□□□ 0.72
RPL13A-201ENST00000391857 TEX13AQ9BXU3 409 aaPredicted RBP19.56■□□□□ 0.72
RPL13A-201ENST00000391857 DDX21Q9NR30 783 aaKnown RBP eCLIP19.56■□□□□ 0.72
RPL13A-201ENST00000391857 HMOX1P09601 288 aa19.55■□□□□ 0.72
RPL13A-201ENST00000391857 ADAMTSL1Q8N6G6 1762 aa19.55■□□□□ 0.72
RPL13A-201ENST00000391857 KLRG2A4D1S0 409 aaPredicted RBP19.54■□□□□ 0.72
RPL13A-201ENST00000391857 A1BGP04217 495 aa19.54■□□□□ 0.72
RPL13A-201ENST00000391857 NPR1P16066 1061 aa19.54■□□□□ 0.72
RPL13A-201ENST00000391857 OLFM4Q6UX06 510 aa19.54■□□□□ 0.72
RPL13A-201ENST00000391857 CAPNS2Q96L46 248 aa19.54■□□□□ 0.72
RPL13A-201ENST00000391857 HEG1Q9ULI3 1381 aa19.54■□□□□ 0.72
RPL13A-201ENST00000391857 FMR1Q06787 632 aaKnown RBP eCLIP19.53■□□□□ 0.721e-18■■■□□ 19
RPL13A-201ENST00000391857 ZNF790Q6PG37 636 aa19.53■□□□□ 0.72
RPL13A-201ENST00000391857 GPR101Q96P66 508 aaPredicted RBP19.53■□□□□ 0.72
RPL13A-201ENST00000391857 BEGAINQ9BUH8 593 aa19.53■□□□□ 0.72
RPL13A-201ENST00000391857 ECE1P42892 770 aa19.52■□□□□ 0.72
RPL13A-201ENST00000391857 CYP4F22Q6NT55 531 aa19.52■□□□□ 0.72
RPL13A-201ENST00000391857 RTKN2Q8IZC4 609 aa19.52■□□□□ 0.72
RPL13A-201ENST00000391857 GPC2Q8N158 579 aa19.52■□□□□ 0.72
RPL13A-201ENST00000391857 IARSP41252 1262 aaKnown RBP19.51■□□□□ 0.71
RPL13A-201ENST00000391857 SYNE4Q8N205 404 aa19.51■□□□□ 0.71
RPL13A-201ENST00000391857 NPM2Q86SE8 214 aaKnown RBP19.5■□□□□ 0.71
RPL13A-201ENST00000391857 NBPF5PQ86XG9 351 aaPredicted RBP19.5■□□□□ 0.71
RPL13A-201ENST00000391857 DZIP3Q86Y13 1208 aaKnown RBP19.5■□□□□ 0.71
RPL13A-201ENST00000391857 IL17REQ8NFR9 667 aa19.5■□□□□ 0.71
RPL13A-201ENST00000391857 CST9Q5W186 159 aa19.49■□□□□ 0.71
RPL13A-201ENST00000391857 CLEC4GQ6UXB4 293 aa19.49■□□□□ 0.71
RPL13A-201ENST00000391857 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
RPL13A-201ENST00000391857 TSKSQ9UJT2 592 aa19.49■□□□□ 0.71
RPL13A-201ENST00000391857 SCN7AQ01118 1682 aa19.49■□□□□ 0.71
RPL13A-201ENST00000391857 GRM1Q13255 1194 aa19.48■□□□□ 0.71
RPL13A-201ENST00000391857 MCOLN1Q9GZU1 580 aa19.48■□□□□ 0.71
RPL13A-201ENST00000391857 UBR2Q8IWV8 1755 aa19.47■□□□□ 0.71
RPL13A-201ENST00000391857 MAP2K2P36507 400 aa19.47■□□□□ 0.71
RPL13A-201ENST00000391857 TEFQ10587 303 aa19.47■□□□□ 0.71
RPL13A-201ENST00000391857 FMNL2Q96PY5 1086 aa19.47■□□□□ 0.71
RPL13A-201ENST00000391857 TLL2Q9Y6L7 1015 aa19.47■□□□□ 0.71
RPL13A-201ENST00000391857 EPS15P42566 896 aa19.46■□□□□ 0.71
RPL13A-201ENST00000391857 JDP2Q8WYK2 163 aa19.46■□□□□ 0.71
RPL13A-201ENST00000391857 TRAF5O00463 557 aa19.45■□□□□ 0.7
RPL13A-201ENST00000391857 AOC2O75106 756 aa19.45■□□□□ 0.7
RPL13A-201ENST00000391857 TPTE2Q6XPS3 522 aa19.45■□□□□ 0.7
RPL13A-201ENST00000391857 CFAP44Q96MT7 982 aa19.45■□□□□ 0.7
RPL13A-201ENST00000391857 PSMD1Q99460 953 aa19.45■□□□□ 0.7
RPL13A-201ENST00000391857 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
RPL13A-201ENST00000391857 GJA3Q9Y6H8 435 aa19.45■□□□□ 0.7
RPL13A-201ENST00000391857 ARFGEF2Q9Y6D5 1785 aa19.44■□□□□ 0.7
RPL13A-201ENST00000391857 THSD7BQ9C0I4 1608 aa19.44■□□□□ 0.7
RPL13A-201ENST00000391857 KCNQ3O43525 872 aa19.44■□□□□ 0.7
RPL13A-201ENST00000391857 ALDH1B1P30837 517 aa19.44■□□□□ 0.7
RPL13A-201ENST00000391857 PIP4K2AP48426 406 aaPredicted RBP19.44■□□□□ 0.7
RPL13A-201ENST00000391857 SCNN1DP51172 638 aa19.44■□□□□ 0.7
RPL13A-201ENST00000391857 EIF6P56537 245 aaKnown RBP19.44■□□□□ 0.7
RPL13A-201ENST00000391857 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
RPL13A-201ENST00000391857 SNED1Q8TER0 1413 aa19.43■□□□□ 0.7
RPL13A-201ENST00000391857 LMOD1P29536 600 aaPredicted RBP19.43■□□□□ 0.7
RPL13A-201ENST00000391857 GNAT3A8MTJ3 354 aa19.42■□□□□ 0.7
RPL13A-201ENST00000391857 CA12O43570 354 aa19.42■□□□□ 0.7
RPL13A-201ENST00000391857 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
RPL13A-201ENST00000391857 USP50Q70EL3 339 aaPredicted RBP19.42■□□□□ 0.7
RPL13A-201ENST00000391857 NIP7Q9Y221 180 aaKnown RBP eCLIP19.42■□□□□ 0.76e-75■□□□□ 10.1
RPL13A-201ENST00000391857 ZNF652Q9Y2D9 606 aa19.42■□□□□ 0.7
RPL13A-201ENST00000391857 DIAPH1O60610 1272 aaKnown RBP19.41■□□□□ 0.7
RPL13A-201ENST00000391857 SAPCD2Q86UD0 394 aa19.41■□□□□ 0.7
RPL13A-201ENST00000391857 TIMELESSQ9UNS1 1208 aa19.41■□□□□ 0.7
RPL13A-201ENST00000391857 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
RPL13A-201ENST00000391857 PRAMEF22A3QJZ6 481 aa19.39■□□□□ 0.69
RPL13A-201ENST00000391857 FAM177BA6PVY3 158 aa19.39■□□□□ 0.69
RPL13A-201ENST00000391857 RGL2O15211 777 aa19.39■□□□□ 0.69
RPL13A-201ENST00000391857 DGKZQ13574 1117 aa19.39■□□□□ 0.69
RPL13A-201ENST00000391857 CC2D2BQ6DHV5 1058 aa19.39■□□□□ 0.69
RPL13A-201ENST00000391857 GAS2L2Q8NHY3 880 aa19.39■□□□□ 0.69
RPL13A-201ENST00000391857 COL4A5P29400 1685 aa19.39■□□□□ 0.69
RPL13A-201ENST00000391857 LTBP1Q14766 1721 aa19.39■□□□□ 0.69
RPL13A-201ENST00000391857 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
RPL13A-201ENST00000391857 HSPA5P11021 654 aaKnown RBP19.38■□□□□ 0.69
RPL13A-201ENST00000391857 BRPF1P55201 1214 aaPredicted RBP19.38■□□□□ 0.69
RPL13A-201ENST00000391857 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
RPL13A-201ENST00000391857 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
RPL13A-201ENST00000391857 LARGE2Q8N3Y3 721 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms