RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 TMX1Q9H3N1 280 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 ZBTB3Q9H5J0 574 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 ANO6Q4KMQ2 910 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 CCDC47Q96A33 483 aaKnown RBP15.19■□□□□ 0.02
PCNX4-202ENST00000391611 PRDM11Q9NQV5 511 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCNX4-202ENST00000391611 IGSF3O75054 1194 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 UVSSAQ2YD98 709 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 DENND4BO75064 1496 aaPredicted RBP15.18■□□□□ 0.02
PCNX4-202ENST00000391611 CCDC69A6NI79 296 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 FILIP1LQ4L180 1135 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 ANKLE2Q86XL3 938 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 GCC2Q8IWJ2 1684 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 URI1O94763 535 aaPredicted RBP15.18■□□□□ 0.02
PCNX4-202ENST00000391611 KIF18AQ8NI77 898 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 DNAJC25Q9H1X3 360 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 BRMS1Q9HCU9 246 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 HYPKQ9NX55 129 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 TMEM63CQ9P1W3 806 aa15.18■□□□□ 0.02
PCNX4-202ENST00000391611 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
PCNX4-202ENST00000391611 PDIA4P13667 645 aaKnown RBP15.17■□□□□ 0.02
PCNX4-202ENST00000391611 KLHL10Q6JEL2 608 aa15.17■□□□□ 0.02
PCNX4-202ENST00000391611 CCAR1Q8IX12 1150 aaKnown RBP15.17■□□□□ 0.02
PCNX4-202ENST00000391611 CFAP65Q6ZU64 1925 aaKnown RBP15.17■□□□□ 0.02
PCNX4-202ENST00000391611 KDM5CP41229 1560 aa15.17■□□□□ 0.02
PCNX4-202ENST00000391611 PPFIBP1Q86W92 1011 aa15.17■□□□□ 0.02
PCNX4-202ENST00000391611 CCDC144CPQ8IYA2 1237 aa15.17■□□□□ 0.02
PCNX4-202ENST00000391611 LRRC59Q96AG4 307 aaKnown RBP15.17■□□□□ 0.02
PCNX4-202ENST00000391611 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
PCNX4-202ENST00000391611 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.17■□□□□ 0.02
PCNX4-202ENST00000391611 V9GYY5 206 aaPredicted RBP15.17■□□□□ 0.02
PCNX4-202ENST00000391611 TDO2P48775 406 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 AMOTQ4VCS5 1084 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 METTL24Q5JXM2 366 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 CAGE1Q8TC20 777 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
PCNX4-202ENST00000391611 CHL1O00533 1208 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 USP19O94966 1318 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 HSP90AA4PQ58FG1 418 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 ASXL2Q76L83 1435 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 CCDC66A2RUB6 948 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 NMIQ13287 307 aaPredicted RBP15.16■□□□□ 0.02
PCNX4-202ENST00000391611 COPS6Q7L5N1 327 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 CHST3Q7LGC8 479 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 AMOTL1Q8IY63 956 aa15.16■□□□□ 0.02
PCNX4-202ENST00000391611 FAM200AQ8TCP9 573 aa15.15■□□□□ 0.02
PCNX4-202ENST00000391611 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
PCNX4-202ENST00000391611 GOLGA8BA8MQT2 603 aa15.15■□□□□ 0.02
PCNX4-202ENST00000391611 TMC6Q7Z403 805 aa15.15■□□□□ 0.02
PCNX4-202ENST00000391611 LUZP1Q86V48 1076 aa15.15■□□□□ 0.02
PCNX4-202ENST00000391611 TRERF1Q96PN7 1200 aa15.15■□□□□ 0.02
PCNX4-202ENST00000391611 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
PCNX4-202ENST00000391611 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
PCNX4-202ENST00000391611 SMTNL1A8MU46 457 aa15.14■□□□□ 0.01
PCNX4-202ENST00000391611 CCP110O43303 1012 aa15.14■□□□□ 0.01
PCNX4-202ENST00000391611 PTGS1P23219 599 aa15.14■□□□□ 0.01
PCNX4-202ENST00000391611 XAGE3Q8WTP9 111 aa15.14■□□□□ 0.01
PCNX4-202ENST00000391611 INTS4Q96HW7 963 aaKnown RBP15.14■□□□□ 0.01
PCNX4-202ENST00000391611 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-202ENST00000391611 ORC3Q9UBD5 711 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-202ENST00000391611 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-202ENST00000391611 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
PCNX4-202ENST00000391611 CPLX3Q8WVH0 158 aa15.14■□□□□ 0.01
PCNX4-202ENST00000391611 TSC1Q92574 1164 aa15.14■□□□□ 0.01
PCNX4-202ENST00000391611 AIDAQ96BJ3 306 aa15.14■□□□□ 0.01
PCNX4-202ENST00000391611 NOL7Q9UMY1 257 aaKnown RBP15.14■□□□□ 0.01
PCNX4-202ENST00000391611 NPATQ14207 1427 aa15.14■□□□□ 0.01
PCNX4-202ENST00000391611 GRM8O00222 908 aa15.13■□□□□ 0.01
PCNX4-202ENST00000391611 PRIMPOLQ96LW4 560 aa15.13■□□□□ 0.01
PCNX4-202ENST00000391611 NACAP1Q9BZK3 213 aa15.13■□□□□ 0.01
PCNX4-202ENST00000391611 TYRO3Q06418 890 aa15.13■□□□□ 0.01
PCNX4-202ENST00000391611 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
PCNX4-202ENST00000391611 PALD1Q9ULE6 856 aa15.13■□□□□ 0.01
PCNX4-202ENST00000391611 WDR7Q9Y4E6 1490 aa15.13■□□□□ 0.01
PCNX4-202ENST00000391611 ZNF445P59923 1031 aa15.13■□□□□ 0.01
PCNX4-202ENST00000391611 ZNF213O14771 459 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 GPTP24298 496 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 Q6ZUG5 572 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 KLHDC4Q8TBB5 520 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 ZBTB9Q96C00 473 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 TMX4Q9H1E5 349 aaPredicted RBP15.12■□□□□ 0.01
PCNX4-202ENST00000391611 LRP2BPQ9P2M1 347 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 MINDY4BA8MYZ0 360 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 POLR3GO15318 223 aaPredicted RBP15.12■□□□□ 0.01
PCNX4-202ENST00000391611 CBFA2T2O43439 604 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 CDKL5O76039 1030 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 NBPF7P0C2Y1 421 aaPredicted RBP15.12■□□□□ 0.01
PCNX4-202ENST00000391611 CREB3L3Q68CJ9 461 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 PLEKHF1Q96S99 279 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 UBAC1Q9BSL1 405 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 CHRNA2Q15822 529 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 SMARCE1Q969G3 411 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 SKILP12757 684 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 HS1BP3Q53T59 392 aa15.12■□□□□ 0.01
PCNX4-202ENST00000391611 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms