RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PNMA5Q96PV4 448 aa2.79□□□□□ -1.96
SNORD28B-201ENST00000390993 VRTNQ9H8Y1 702 aa2.79□□□□□ -1.96
SNORD28B-201ENST00000390993 EFCC1Q9HA90 598 aa2.79□□□□□ -1.96
SNORD28B-201ENST00000390993 NDFIP2Q9NV92 336 aa2.79□□□□□ -1.96
SNORD28B-201ENST00000390993 TFIP11Q9UBB9 837 aaKnown RBP2.79□□□□□ -1.96
SNORD28B-201ENST00000390993 IQSEC3Q9UPP2 1182 aaPredicted RBP2.79□□□□□ -1.96
SNORD28B-201ENST00000390993 ATAD2Q6PL18 1390 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 SFI1A8K8P3 1242 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 EML1O00423 815 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 RFX1P22670 979 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 LMOD1P29536 600 aaPredicted RBP2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 TXLNAP40222 546 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 HIRAP54198 1017 aaPredicted RBP2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 PCBP4P57723 403 aaKnown RBP2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 PCSK7Q16549 785 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 TBCELQ5QJ74 424 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 STAG2Q8N3U4 1231 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 SCG3Q8WXD2 468 aaKnown RBP2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 DCAF5Q96JK2 942 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 BTBD6Q96KE9 485 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 PPP1R12CQ9BZL4 782 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 PHACTR1Q9C0D0 580 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 KCNH4Q9UQ05 1017 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 HCN4Q9Y3Q4 1203 aa2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 MAFBQ9Y5Q3 323 aaPredicted RBP2.78□□□□□ -1.96
SNORD28B-201ENST00000390993 ELOA3CA0A087WX78 387 aaPredicted RBP2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 ELOA3DA6NLF2 546 aaPredicted RBP2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 FAM196BA6NMK8 535 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 SHISA8B8ZZ34 492 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 ZBTB7BO15156 539 aaPredicted RBP2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 SIN3BO75182 1162 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 APBA3O96018 575 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 THBS1P07996 1170 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 EPHA4P54764 986 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 CLDN10P78369 228 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 UBAP2LQ14157 1087 aaKnown RBP2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 ELOA3BQ3SY89 546 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 CHSY3Q70JA7 882 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 SYT9Q86SS6 491 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 ALDH16A1Q8IZ83 802 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 TSEN2Q8NCE0 465 aaKnown RBP2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 ELOA3Q8NG57 546 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 FAM200AQ8TCP9 573 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 ZDHHC1Q8WTX9 485 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 NGLY1Q96IV0 654 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 NACC1Q96RE7 527 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 UCN2Q96RP3 112 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 TSPAN10Q9H1Z9 355 aaPredicted RBP2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 BRD7Q9NPI1 651 aa2.77□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L15C9J2P7 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L10C9JJH3 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L13C9JLJ4 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L12C9JPN9 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L11C9JVI0 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L21D6R901 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L18D6R9N7 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L22D6RA61 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L17D6RBQ6 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L19D6RCP7 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L20D6RJB6 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 C2CD2LO14523 706 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 EFSO43281 561 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 IGFBP4P22692 258 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 SNRPNP63162 240 aaKnown RBP2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 TBC1D8BQ0IIM8 1120 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 SPEM2Q0P670 501 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP17L24Q0WX57 530 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 DPYDQ12882 1025 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 TRIM28Q13263 835 aaKnown RBP2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 RTN1Q16799 776 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 PLA2G4EQ3MJ16 856 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 ANKMY2Q8IV38 441 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 FNBP4Q8N3X1 1017 aaPredicted RBP2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 ADAMTS19Q8TE59 1207 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 SUSD3Q96L08 255 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 C2orf49Q9BVC5 232 aaPredicted RBP2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 KIAA1024Q9UPX6 916 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 USP3Q9Y6I4 520 aa2.76□□□□□ -1.97
SNORD28B-201ENST00000390993 ADARB2-AS1A8MUL3 147 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 FOXO3O43524 673 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 SPATA31C1P0DKV0 1188 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 ADH7P40394 386 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 DGKGP49619 791 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 GSK3AP49840 483 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 RAC1P63000 192 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 TYRO3Q06418 890 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 PTK7Q13308 1070 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 IER5Q5VY09 327 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 BTLAQ7Z6A9 289 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 ZNF295-AS1Q8N0V1 137 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 BHMTQ93088 406 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 CCDC97Q96F63 343 aaPredicted RBP2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 HSH2DQ96JZ2 352 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 SPOCK3Q9BQ16 436 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 UBE2OQ9C0C9 1292 aaKnown RBP2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 FAM13BQ9NYF5 915 aa2.75□□□□□ -1.97
SNORD28B-201ENST00000390993 TGFBR3LH3BV60 316 aa2.74□□□□□ -1.97
SNORD28B-201ENST00000390993 LILRB5O75023 590 aa2.74□□□□□ -1.97
SNORD28B-201ENST00000390993 ARSDP51689 593 aa2.74□□□□□ -1.97
SNORD28B-201ENST00000390993 KCNQ4P56696 695 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms