RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 ECM2O94769 699 aaPredicted RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 LIG1P18858 919 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 CCDC181Q5TID7 509 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 XAGE3Q8WTP9 111 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 UBXN4Q92575 508 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 ABCA10Q8WWZ4 1543 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 LDHAL6AQ6ZMR3 332 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 CCDC129Q6ZRS4 1044 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 DNAJC25Q9H1X3 360 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 GNL3LQ9NVN8 582 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 SCAF11Q99590 1463 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 GPATCH8Q9UKJ3 1502 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 MATR3P43243 847 aaKnown RBP eCLIP5.82□□□□□ -1.485e-9■■□□□ 14.3
LTN1-202ENST00000389194 AFMP43652 599 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 ANO6Q4KMQ2 910 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 ARHGAP29Q52LW3 1261 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 KIAA1328Q86T90 577 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 ERCC4Q92889 916 aaPredicted RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 UIMC1Q96RL1 719 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 RRAGDQ9NQL2 400 aaPredicted RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 ANKIB1Q9P2G1 1089 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 DBF4Q9UBU7 674 aaPredicted RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 URB2Q14146 1524 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.82□□□□□ -1.48
LTN1-202ENST00000389194 SPTY2D1Q68D10 685 aaPredicted RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 TSC1Q92574 1164 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 RBM8AQ9Y5S9 174 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 VAMP4O75379 141 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 SLC26A6Q9BXS9 759 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 ZNHIT6Q9NWK9 470 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 DACT1Q9NYF0 836 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 PER1O15534 1290 aaPredicted RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 SLC3A2P08195 630 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 IGHMBP2P38935 993 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 CNNM3Q8NE01 707 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 MAP7D2Q96T17 732 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 CGNQ9P2M7 1197 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 FAM135AQ9P2D6 1515 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 EPB41L2O43491 1005 aaKnown RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 SOGA3Q5TF21 947 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 ANKRD24Q8TF21 1146 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 ESYT1Q9BSJ8 1104 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 MKNK2Q9HBH9 465 aa5.82□□□□□ -1.48
LTN1-202ENST00000389194 ORC3Q9UBD5 711 aaPredicted RBP5.82□□□□□ -1.48
LTN1-202ENST00000389194 BICRAQ9NZM4 1560 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 CCDC186Q7Z3E2 898 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 NFATC2IPQ8NCF5 419 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 CNKSR2Q8WXI2 1034 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 PDCL3Q9H2J4 239 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 NEK1Q96PY6 1258 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 SLC12A7Q9Y666 1083 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 GOLGA8AA7E2F4 631 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 TOP1P11387 765 aaKnown RBP5.81□□□□□ -1.48
LTN1-202ENST00000389194 SSR1P43307 286 aaKnown RBP5.81□□□□□ -1.48
LTN1-202ENST00000389194 AK2P54819 239 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 KRT32Q14532 448 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 PLEKHM2Q8IWE5 1019 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 DDX17Q92841 729 aaKnown RBP5.81□□□□□ -1.48
LTN1-202ENST00000389194 ZKSCAN3Q9BRR0 538 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 CTNNA3Q9UI47 895 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 KIF14Q15058 1648 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 KIF4BQ2VIQ3 1234 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 LMBR1LQ6UX01 489 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 LEKR1Q6ZMV7 388 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 Q6ZUG5 572 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 DRC1Q96MC2 740 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.81□□□□□ -1.48
LTN1-202ENST00000389194 RPGRIP1LQ68CZ1 1315 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 F8W031 263 aaPredicted RBP5.81□□□□□ -1.48
LTN1-202ENST00000389194 RRP9O43818 475 aaKnown RBP5.81□□□□□ -1.48
LTN1-202ENST00000389194 NMIQ13287 307 aaPredicted RBP5.81□□□□□ -1.48
LTN1-202ENST00000389194 KRT28Q7Z3Y7 464 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 PLIN2Q99541 437 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 MMRN2Q9H8L6 949 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 STARD3NLO95772 234 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 PTGS1P23219 599 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 LMOD1P29536 600 aaPredicted RBP5.81□□□□□ -1.48
LTN1-202ENST00000389194 TMEM67Q5HYA8 995 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 CEP85Q6P2H3 762 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 CCDC24Q8N4L8 307 aa5.81□□□□□ -1.48
LTN1-202ENST00000389194 DHX29Q7Z478 1369 aaKnown RBP5.81□□□□□ -1.48
LTN1-202ENST00000389194 KLF18A0A0U1RQI7 1052 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 GTF2F1P35269 517 aaKnown RBP eCLIP5.8□□□□□ -1.48
LTN1-202ENST00000389194 TERF1P54274 439 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 APOBRQ0VD83 1088 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 KLHL40Q2TBA0 621 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 LUZP1Q86V48 1076 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 NEFHP12036 1026 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 HDAC1Q13547 482 aaPredicted RBP5.8□□□□□ -1.48
LTN1-202ENST00000389194 SCAND2PQ9GZW5 306 aaPredicted RBP5.8□□□□□ -1.48
LTN1-202ENST00000389194 ZMYND15Q9H091 742 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 ZBTB40Q9NUA8 1239 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 PARD3Q8TEW0 1356 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 ANKRD62A6NC57 917 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 ZSCAN22P10073 491 aaPredicted RBP5.8□□□□□ -1.48
LTN1-202ENST00000389194 ERCC3P19447 782 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 ZNF76P36508 570 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 PKP1Q13835 747 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 ANKRD13DQ6ZTN6 518 aa5.8□□□□□ -1.48
LTN1-202ENST00000389194 MIGA1Q8NAN2 632 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms