RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 EFHC2Q5JST6 749 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 RNFT1Q5M7Z0 435 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 TBCELQ5QJ74 424 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 FAM182BQ5T319 152 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 TMEM164Q5U3C3 297 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 FIGNL1Q6PIW4 674 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 RIPOR1Q6ZS17 1223 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 STK32AQ8WU08 396 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 SCG3Q8WXD2 468 aaKnown RBP4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 ZCCHC2Q9C0B9 1178 aaKnown RBP4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 RUBCNLQ9H714 662 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 MBIPQ9NS73 344 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 HCN2Q9UL51 889 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 ATXN7L1Q9ULK2 861 aaPredicted RBP4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 CHMP3Q9Y3E7 222 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 CDC14CA4D256 554 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 CSB-PGBD3P0DP91 1061 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 LAMC2Q13753 1193 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 IER5Q5VY09 327 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 FOXR1Q6PIV2 292 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 ALDH16A1Q8IZ83 802 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 PGBD3Q8N328 593 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 GTPBP3Q969Y2 492 aaKnown RBP4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 HINFPQ9BQA5 517 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 PHACTR1Q9C0D0 580 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 GPAMQ9HCL2 828 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 LRRC4BQ9NT99 713 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 CXXC1Q9P0U4 656 aaPredicted RBP4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 SLAIN2Q9P270 581 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 PHF24Q9UPV7 400 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 PCDHGC4Q9Y5F7 938 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 PARP3Q9Y6F1 533 aa4.72□□□□□ -1.65
RNU6-541P-201ENST00000384709 BNIP3LO60238 219 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 TNP2Q05952 138 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 RTN1Q16799 776 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 AIDAQ96BJ3 306 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 KLRG1Q96E93 195 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 CNTNAP3BQ96NU0 1288 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 TRERF1Q96PN7 1200 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 CNTNAP3Q9BZ76 1288 aa4.71□□□□□ -1.66
RNU6-541P-201ENST00000384709 KCNQ4P56696 695 aa4.7□□□□□ -1.66
RNU6-541P-201ENST00000384709 FKBP5Q13451 457 aaPredicted RBP4.7□□□□□ -1.66
RNU6-541P-201ENST00000384709 HIF1AQ16665 826 aa4.7□□□□□ -1.66
RNU6-541P-201ENST00000384709 AVENQ9NQS1 362 aaPredicted RBP4.7□□□□□ -1.66
RNU6-541P-201ENST00000384709 ANKIB1Q9P2G1 1089 aa4.7□□□□□ -1.66
RNU6-541P-201ENST00000384709 DMGDHQ9UI17 866 aaKnown RBP4.7□□□□□ -1.66
RNU6-541P-201ENST00000384709 USTQ9Y2C2 406 aa4.7□□□□□ -1.66
RNU6-541P-201ENST00000384709 HCN4Q9Y3Q4 1203 aa4.7□□□□□ -1.66
RNU6-541P-201ENST00000384709 IGF1RP08069 1367 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 GPR25O00155 361 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 SUPT5HO00267 1087 aaKnown RBP4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 C2CD2LO14523 706 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 ATXN7O15265 892 aaPredicted RBP4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 ARHGEF15O94989 841 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 FGFR3P22607 806 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 MAP2K3P46734 347 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 RHPN1Q8TCX5 695 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 SUSD3Q96L08 255 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 QTRT2Q9H974 415 aaKnown RBP4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 C11orf16Q9NQ32 467 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 ZNF232Q9UNY5 417 aa4.69□□□□□ -1.66
RNU6-541P-201ENST00000384709 TGFBR3LH3BV60 316 aa4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 ADAMTS2O95450 1211 aa4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 MAPTP10636 758 aaKnown RBP4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 MX2P20592 715 aa4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 ARSJQ5FYB0 599 aaPredicted RBP4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 ZNF385CQ66K41 422 aaPredicted RBP4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 BICDL1Q6ZP65 573 aa4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 ABHD17AQ96GS6 310 aa4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 MDFIQ99750 246 aa4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 BCS1LQ9Y276 419 aa4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 DNMT3AQ9Y6K1 912 aaPredicted RBP4.68□□□□□ -1.66
RNU6-541P-201ENST00000384709 PTCD1O75127 700 aaKnown RBP4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 SSFA2P28290 1259 aa4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 CTBSQ01459 385 aa4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 TYRO3Q06418 890 aa4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 C11orf91Q3C1V1 193 aa4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 ZNF280CQ8ND82 737 aa4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 PRIMPOLQ96LW4 560 aa4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 EFCC1Q9HA90 598 aa4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 MARK1Q9P0L2 795 aa4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 NSFL1CQ9UNZ2 370 aaKnown RBP4.67□□□□□ -1.66
RNU6-541P-201ENST00000384709 PRMT3O60678 531 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 CELA2BP08218 269 aaPredicted RBP4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 ARAFP10398 606 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 ATP2B4P23634 1241 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 COX20Q5RI15 118 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 PHLDB3Q6NSJ2 640 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 LRRC69Q6ZNQ3 347 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 CHMP7Q8WUX9 453 aaPredicted RBP4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 ACDQ96AP0 544 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 STRN4Q9NRL3 753 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 LRFN2Q9ULH4 789 aa4.66□□□□□ -1.66
RNU6-541P-201ENST00000384709 RNF225M0QZC1 329 aaPredicted RBP4.65□□□□□ -1.67
RNU6-541P-201ENST00000384709 LGR5O75473 907 aa4.65□□□□□ -1.67
RNU6-541P-201ENST00000384709 GRNP28799 593 aaKnown RBP4.65□□□□□ -1.67
RNU6-541P-201ENST00000384709 LYPD4Q6UWN0 246 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms