RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 INTS5Q6P9B9 1019 aaKnown RBP12.11□□□□□ -0.47
HMGN1-202ENST00000380747 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
HMGN1-202ENST00000380747 DLG5Q8TDM6 1919 aa12.1□□□□□ -0.47
HMGN1-202ENST00000380747 STARD3NLO95772 234 aa12.1□□□□□ -0.47
HMGN1-202ENST00000380747 COL5A3P25940 1745 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-202ENST00000380747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-202ENST00000380747 TOMM70O94826 608 aa12.09□□□□□ -0.47
HMGN1-202ENST00000380747 CANXP27824 592 aaKnown RBP12.09□□□□□ -0.47
HMGN1-202ENST00000380747 RFC4P35249 363 aa12.09□□□□□ -0.47
HMGN1-202ENST00000380747 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
HMGN1-202ENST00000380747 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
HMGN1-202ENST00000380747 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-202ENST00000380747 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-202ENST00000380747 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
HMGN1-202ENST00000380747 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
HMGN1-202ENST00000380747 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
HMGN1-202ENST00000380747 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
HMGN1-202ENST00000380747 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.48
HMGN1-202ENST00000380747 FAM9BQ8IZU0 186 aa12.08□□□□□ -0.48
HMGN1-202ENST00000380747 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
HMGN1-202ENST00000380747 ZBTB1Q9Y2K1 713 aa12.08□□□□□ -0.48
HMGN1-202ENST00000380747 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.48
HMGN1-202ENST00000380747 A1BGP04217 495 aa12.07□□□□□ -0.48
HMGN1-202ENST00000380747 TGFB2P61812 414 aa12.07□□□□□ -0.48
HMGN1-202ENST00000380747 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-202ENST00000380747 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-202ENST00000380747 KIF13BQ9NQT8 1826 aa12.07□□□□□ -0.48
HMGN1-202ENST00000380747 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
HMGN1-202ENST00000380747 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
HMGN1-202ENST00000380747 USP16Q9Y5T5 823 aa12.06□□□□□ -0.48
HMGN1-202ENST00000380747 C10orf71Q711Q0 1435 aa12.05□□□□□ -0.48
HMGN1-202ENST00000380747 MMP10P09238 476 aa12.05□□□□□ -0.48
HMGN1-202ENST00000380747 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-202ENST00000380747 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
HMGN1-202ENST00000380747 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-202ENST00000380747 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
HMGN1-202ENST00000380747 BABAM1Q9NWV8 329 aa12.05□□□□□ -0.48
HMGN1-202ENST00000380747 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
HMGN1-202ENST00000380747 COL15A1P39059 1388 aa12.05□□□□□ -0.48
HMGN1-202ENST00000380747 KIAA1551Q9HCM1 1747 aa12.04□□□□□ -0.48
HMGN1-202ENST00000380747 ZPR1O75312 459 aa12.04□□□□□ -0.48
HMGN1-202ENST00000380747 GYS1P13807 737 aa12.04□□□□□ -0.48
HMGN1-202ENST00000380747 NLGN1Q8N2Q7 840 aa12.04□□□□□ -0.48
HMGN1-202ENST00000380747 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
HMGN1-202ENST00000380747 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
HMGN1-202ENST00000380747 SALL2Q9Y467 1007 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-202ENST00000380747 MYH14Q7Z406 1995 aaKnown RBP12.04□□□□□ -0.48
HMGN1-202ENST00000380747 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
HMGN1-202ENST00000380747 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
HMGN1-202ENST00000380747 A0A087WZG4 1122 aa12.03□□□□□ -0.48
HMGN1-202ENST00000380747 CHL1O00533 1208 aa12.03□□□□□ -0.48
HMGN1-202ENST00000380747 EIF5P55010 431 aaKnown RBP12.03□□□□□ -0.48
HMGN1-202ENST00000380747 CALD1Q05682 793 aaKnown RBP12.03□□□□□ -0.48
HMGN1-202ENST00000380747 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
HMGN1-202ENST00000380747 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
HMGN1-202ENST00000380747 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
HMGN1-202ENST00000380747 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
HMGN1-202ENST00000380747 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-202ENST00000380747 JMYQ8N9B5 988 aa12.02□□□□□ -0.49
HMGN1-202ENST00000380747 NARFQ9UHQ1 456 aa12.02□□□□□ -0.49
HMGN1-202ENST00000380747 C4AP0C0L4 1744 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 NBPF26B4DH59 902 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 EIF2S2P20042 333 aaKnown RBP12.01□□□□□ -0.49
HMGN1-202ENST00000380747 GNAI1P63096 354 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 FSTL1Q12841 308 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 NBPF10Q6P3W6 841 aaKnown RBP12.01□□□□□ -0.49
HMGN1-202ENST00000380747 NBPF15Q8N660 670 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 NMRK2Q9NPI5 230 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 IFT57Q9NWB7 429 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 BCS1LQ9Y276 419 aa12.01□□□□□ -0.49
HMGN1-202ENST00000380747 A0A0G2JLW4 131 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 CCER2I3L3R5 266 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 CCDC27Q2M243 656 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 KRT24Q2M2I5 525 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 DZIP3Q86Y13 1208 aaKnown RBP12□□□□□ -0.49
HMGN1-202ENST00000380747 WWC1Q8IX03 1113 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 NGEFQ8N5V2 710 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 KLRG1Q96E93 195 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 MBIPQ9NS73 344 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 PARP3Q9Y6F1 533 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 WDR90Q96KV7 1748 aa12□□□□□ -0.49
HMGN1-202ENST00000380747 MYL6BP14649 208 aa11.99□□□□□ -0.49
HMGN1-202ENST00000380747 ARHGAP27Q6ZUM4 889 aa11.99□□□□□ -0.49
HMGN1-202ENST00000380747 NECTIN2Q92692 538 aa11.99□□□□□ -0.49
HMGN1-202ENST00000380747 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
HMGN1-202ENST00000380747 BRCA1P38398 1863 aaKnown RBP11.98□□□□□ -0.49
HMGN1-202ENST00000380747 ZNF853P0CG23 659 aa11.98□□□□□ -0.49
HMGN1-202ENST00000380747 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
HMGN1-202ENST00000380747 DPEP1P16444 411 aa11.98□□□□□ -0.49
HMGN1-202ENST00000380747 KCNA3P22001 575 aa11.98□□□□□ -0.49
HMGN1-202ENST00000380747 DDR1Q08345 913 aa11.98□□□□□ -0.49
HMGN1-202ENST00000380747 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
HMGN1-202ENST00000380747 BICDL1Q6ZP65 573 aa11.98□□□□□ -0.49
HMGN1-202ENST00000380747 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
HMGN1-202ENST00000380747 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
HMGN1-202ENST00000380747 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-202ENST00000380747 KDM2BQ8NHM5 1336 aa11.97□□□□□ -0.49
HMGN1-202ENST00000380747 GTPBP6O43824 516 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-202ENST00000380747 CAMTA2O94983 1202 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms