RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 H2AFXP16104 143 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-204ENST00000380393 TMCO3Q6UWJ1 677 aa11.03□□□□□ -0.64
PTPRA-204ENST00000380393 MIEF2Q96C03 454 aa11.03□□□□□ -0.64
PTPRA-204ENST00000380393 ETAA1Q9NY74 926 aa11.03□□□□□ -0.64
PTPRA-204ENST00000380393 NKTRP30414 1462 aaKnown RBP11.02□□□□□ -0.64
PTPRA-204ENST00000380393 CORO7P57737 925 aa11.02□□□□□ -0.64
PTPRA-204ENST00000380393 LRMPQ12912 555 aa11.02□□□□□ -0.64
PTPRA-204ENST00000380393 CWC27Q6UX04 472 aaKnown RBP11.02□□□□□ -0.64
PTPRA-204ENST00000380393 ZSCAN16Q9H4T2 348 aaPredicted RBP11.02□□□□□ -0.64
PTPRA-204ENST00000380393 ZNF521Q96K83 1311 aa11.02□□□□□ -0.65
PTPRA-204ENST00000380393 MICALL1Q8N3F8 863 aa11.02□□□□□ -0.65
PTPRA-204ENST00000380393 CPSF2Q9P2I0 782 aaKnown RBP11.02□□□□□ -0.65
PTPRA-204ENST00000380393 UHRF1BP1Q6BDS2 1440 aa11.02□□□□□ -0.65
PTPRA-204ENST00000380393 KIF2AO00139 706 aaPredicted RBP11.02□□□□□ -0.65
PTPRA-204ENST00000380393 PAX7P23759 505 aa11.02□□□□□ -0.65
PTPRA-204ENST00000380393 CCDC96Q2M329 555 aa11.02□□□□□ -0.65
PTPRA-204ENST00000380393 ERCC6LQ2NKX8 1250 aa11.02□□□□□ -0.65
PTPRA-204ENST00000380393 GBP6Q6ZN66 633 aa11.02□□□□□ -0.65
PTPRA-204ENST00000380393 ZNF428Q96B54 188 aa11.02□□□□□ -0.65
PTPRA-204ENST00000380393 REREQ9P2R6 1566 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 USP8P40818 1118 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 REXO1L1PQ8IX06 675 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 ARGLU1Q9NWB6 273 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-204ENST00000380393 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 DNAJC14Q6Y2X3 702 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-204ENST00000380393 EXOC4Q96A65 974 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 MYO5BQ9ULV0 1848 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 ANKRD33BA6NCL7 494 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 CCDC186Q7Z3E2 898 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 FMNL3Q8IVF7 1028 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
PTPRA-204ENST00000380393 ERCC4Q92889 916 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-204ENST00000380393 TNRQ92752 1358 aa11□□□□□ -0.65
PTPRA-204ENST00000380393 CPP00450 1065 aa11□□□□□ -0.65
PTPRA-204ENST00000380393 ANKRD23Q86SG2 305 aa11□□□□□ -0.65
PTPRA-204ENST00000380393 ZDHHC9Q9Y397 364 aa11□□□□□ -0.65
PTPRA-204ENST00000380393 C1QTNF12Q5T7M4 302 aa11□□□□□ -0.65
PTPRA-204ENST00000380393 TADA2BQ86TJ2 420 aa11□□□□□ -0.65
PTPRA-204ENST00000380393 THOC1Q96FV9 657 aaKnown RBP11□□□□□ -0.65
PTPRA-204ENST00000380393 LNPKQ9C0E8 428 aa11□□□□□ -0.65
PTPRA-204ENST00000380393 ERCC3P19447 782 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 LTKP29376 864 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 FOXR1Q6PIV2 292 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 EFCAB13Q8IY85 973 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 ZGPATQ8N5A5 531 aaKnown RBP10.99□□□□□ -0.65
PTPRA-204ENST00000380393 SRRTQ9BXP5 876 aaKnown RBP10.99□□□□□ -0.65
PTPRA-204ENST00000380393 GNL3LQ9NVN8 582 aaKnown RBP10.99□□□□□ -0.65
PTPRA-204ENST00000380393 KIF1BO60333 1816 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 AP5Z1O43299 807 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 RARSP54136 660 aaKnown RBP10.99□□□□□ -0.65
PTPRA-204ENST00000380393 ADCY2Q08462 1091 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 ADAM21Q9UKJ8 722 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 COQ9O75208 318 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 PSMD2Q13200 908 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 SMC1AQ14683 1233 aaKnown RBP10.99□□□□□ -0.65
PTPRA-204ENST00000380393 ANKRD45Q5TZF3 282 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 PSD3Q9NYI0 1048 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 ERBB3P21860 1342 aa10.99□□□□□ -0.65
PTPRA-204ENST00000380393 C21orf2O43822 256 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 ELF1P32519 619 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 PTPN14Q15678 1187 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 ARHGAP29Q52LW3 1261 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 ECM2O94769 699 aaPredicted RBP10.98□□□□□ -0.65
PTPRA-204ENST00000380393 TATDN2Q93075 761 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 ADGRB3O60242 1522 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 CCDC34Q96HJ3 373 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 JPH2Q9BR39 696 aaPredicted RBP10.98□□□□□ -0.65
PTPRA-204ENST00000380393 VEZTQ9HBM0 779 aa10.98□□□□□ -0.65
PTPRA-204ENST00000380393 ZRANB2O95218 330 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 TRIM6Q9C030 488 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 FOXD4L6Q3SYB3 417 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 FOXD4L3Q6VB84 417 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■■□□ 16.5
PTPRA-204ENST00000380393 TEX11Q8IYF3 940 aa10.97□□□□□ -0.65
PTPRA-204ENST00000380393 TRMT2AQ8IZ69 625 aaKnown RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 CCDC97Q96F63 343 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 TACO1Q9BSH4 297 aaKnown RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 A0A087WUV0 522 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 CASTP20810 708 aaKnown RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 TBC1D8BQ0IIM8 1120 aa10.97□□□□□ -0.65
PTPRA-204ENST00000380393 WWC2Q6AWC2 1192 aa10.97□□□□□ -0.65
PTPRA-204ENST00000380393 ZC3H13Q5T200 1668 aaKnown RBP10.97□□□□□ -0.65
PTPRA-204ENST00000380393 MADDQ8WXG6 1647 aa10.96□□□□□ -0.65
PTPRA-204ENST00000380393 SEC31AO94979 1220 aaKnown RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 HNRNPH1P31943 449 aaKnown RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 FILIP1Q7Z7B0 1213 aa10.96□□□□□ -0.65
PTPRA-204ENST00000380393 KLHL23Q8NBE8 558 aa10.96□□□□□ -0.65
PTPRA-204ENST00000380393 N4BP2L2Q92802 583 aaPredicted RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 SUDS3Q9H7L9 328 aaPredicted RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 C14orf93Q9H972 538 aaKnown RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 A2ML1A8K2U0 1454 aa10.96□□□□□ -0.65
PTPRA-204ENST00000380393 KINO60870 393 aaKnown RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 NEDD9Q14511 834 aa10.96□□□□□ -0.65
PTPRA-204ENST00000380393 SF3A1Q15459 793 aaKnown RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 PLEKHO1Q53GL0 409 aaPredicted RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 CCDC183Q5T5S1 534 aa10.96□□□□□ -0.65
PTPRA-204ENST00000380393 NUTM2GQ5VZR2 741 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms