RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 GZF1Q9H116 711 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 RNF39Q9H2S5 420 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 SLC24A3Q9HC58 644 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 DDX21Q9NR30 783 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 HYPKQ9NX55 129 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 C9orf78Q9NZ63 289 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 MYL6BP14649 208 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 KAZALD1Q96I82 304 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 ZNF496Q96IT1 587 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 PA2G4Q9UQ80 394 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 TRAK2O60296 914 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 IFNL2Q8IZJ0 200 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 KIF1BPQ96EK5 621 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 PALD1Q9ULE6 856 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 SSFA2P28290 1259 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 BRINP3Q76B58 766 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 USP16Q9Y5T5 823 aa9.74□□□□□ -0.85
PDLIM5-204ENST00000380176 MTX1Q13505 466 aa9.73□□□□□ -0.85
PDLIM5-204ENST00000380176 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-204ENST00000380176 PKD1L3Q7Z443 1732 aa9.73□□□□□ -0.85
PDLIM5-204ENST00000380176 IGKV5-2P06315 115 aa9.73□□□□□ -0.85
PDLIM5-204ENST00000380176 AOX1Q06278 1338 aa9.73□□□□□ -0.85
PDLIM5-204ENST00000380176 LINS1Q8NG48 757 aa9.73□□□□□ -0.85
PDLIM5-204ENST00000380176 SUCLG2Q96I99 432 aa9.73□□□□□ -0.85
PDLIM5-204ENST00000380176 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
PDLIM5-204ENST00000380176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.73□□□□□ -0.851e-6■■■■□ 24.1
PDLIM5-204ENST00000380176 GRM8O00222 908 aa9.72□□□□□ -0.85
PDLIM5-204ENST00000380176 OS9Q13438 667 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-204ENST00000380176 PKP1Q13835 747 aa9.72□□□□□ -0.85
PDLIM5-204ENST00000380176 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
PDLIM5-204ENST00000380176 ZGPATQ8N5A5 531 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-204ENST00000380176 XAGE3Q8WTP9 111 aa9.72□□□□□ -0.85
PDLIM5-204ENST00000380176 BICC1Q9H694 974 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-204ENST00000380176 STRCQ7RTU9 1775 aa9.72□□□□□ -0.85
PDLIM5-204ENST00000380176 ST18O60284 1047 aa9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 COPS6Q7L5N1 327 aa9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 LRP10Q7Z4F1 713 aa9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 DCAF5Q96JK2 942 aa9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 DDX58O95786 925 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 NEK4P51957 841 aa9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 TAF7LQ5H9L4 462 aa9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 DHX37Q8IY37 1157 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 ZMYND15Q9H091 742 aa9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-204ENST00000380176 CPDO75976 1380 aa9.71□□□□□ -0.86
PDLIM5-204ENST00000380176 UTYO14607 1347 aa9.71□□□□□ -0.86
PDLIM5-204ENST00000380176 DDX11L8A8MPP1 907 aa9.71□□□□□ -0.86
PDLIM5-204ENST00000380176 JARID2Q92833 1246 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-204ENST00000380176 RNF25Q96BH1 459 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-204ENST00000380176 MRC1P22897 1456 aa9.71□□□□□ -0.86
PDLIM5-204ENST00000380176 ABCC6O95255 1503 aa9.7□□□□□ -0.86
PDLIM5-204ENST00000380176 HSP90AB4PQ58FF6 505 aa9.7□□□□□ -0.86
PDLIM5-204ENST00000380176 NEURL1BA8MQ27 555 aa9.7□□□□□ -0.86
PDLIM5-204ENST00000380176 FGD1P98174 961 aa9.7□□□□□ -0.86
PDLIM5-204ENST00000380176 TTC5Q8N0Z6 440 aa9.7□□□□□ -0.86
PDLIM5-204ENST00000380176 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
PDLIM5-204ENST00000380176 MYD88Q99836 296 aa9.7□□□□□ -0.86
PDLIM5-204ENST00000380176 SASH1O94885 1247 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 SNRPA1P09661 255 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 CABP4P57796 275 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 EPHA10Q5JZY3 1008 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 LARP1Q6PKG0 1096 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 GBP4Q96PP9 640 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 GLI3P10071 1580 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 AFDNP55196 1824 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 CLASRPQ8N2M8 674 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 PRDM11Q9NQV5 511 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 USP42Q9H9J4 1324 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 GTPBP6O43824 516 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 GCKRQ14397 625 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 NOL8Q76FK4 1167 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 TMX3Q96JJ7 454 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 METTL22Q9BUU2 404 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 UPF3BQ9BZI7 483 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 SIL1Q9H173 461 aa9.69□□□□□ -0.86
PDLIM5-204ENST00000380176 ARFGEF2Q9Y6D5 1785 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 SGSM2O43147 1006 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 CYP2E1P05181 493 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 CWC27Q6UX04 472 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 CNTROBQ8N137 903 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 FMNL2Q96PY5 1086 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 SLAIN2Q9P270 581 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 BAG4O95429 457 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 AACSQ86V21 672 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 EAF2Q96CJ1 260 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 TTC41PQ6P2S7 1318 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 WDR17Q8IZU2 1322 aa9.68□□□□□ -0.86
PDLIM5-204ENST00000380176 FSD2A1L4K1 749 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 GLRX3O76003 335 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 MCCP23508 829 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 NEXNQ0ZGT2 675 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 TLR7Q9NYK1 1049 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 ZDHHC9Q9Y397 364 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms