RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ST5P78524 1137 aa21.96■■□□□ 1.11
HMGN4-201ENST00000377575 PRR5LQ6MZQ0 368 aa21.96■■□□□ 1.11
HMGN4-201ENST00000377575 H0YIN7 160 aa21.95■■□□□ 1.1
HMGN4-201ENST00000377575 MYL6BP14649 208 aa21.95■■□□□ 1.1
HMGN4-201ENST00000377575 PDE6BP35913 854 aa21.95■■□□□ 1.1
HMGN4-201ENST00000377575 CALD1Q05682 793 aaKnown RBP21.95■■□□□ 1.1
HMGN4-201ENST00000377575 C2CD5Q86YS7 1000 aa21.95■■□□□ 1.1
HMGN4-201ENST00000377575 NGEFQ8N5V2 710 aa21.95■■□□□ 1.1
HMGN4-201ENST00000377575 BRIP1Q9BX63 1249 aa21.95■■□□□ 1.1
HMGN4-201ENST00000377575 ADCY9O60503 1353 aa21.95■■□□□ 1.1
HMGN4-201ENST00000377575 CACNA1SQ13698 1873 aa21.94■■□□□ 1.1
HMGN4-201ENST00000377575 CCDC184Q52MB2 194 aa21.94■■□□□ 1.1
HMGN4-201ENST00000377575 NBPF5PQ86XG9 351 aaPredicted RBP21.94■■□□□ 1.1
HMGN4-201ENST00000377575 MRS2Q9HD23 443 aa21.94■■□□□ 1.1
HMGN4-201ENST00000377575 NIP7Q9Y221 180 aaKnown RBP eCLIP21.94■■□□□ 1.1
HMGN4-201ENST00000377575 MAP3K15Q6ZN16 1313 aa21.94■■□□□ 1.1
HMGN4-201ENST00000377575 ARFGEF2Q9Y6D5 1785 aa21.94■■□□□ 1.1
HMGN4-201ENST00000377575 ERVV-1B6SEH8 477 aa21.93■■□□□ 1.1
HMGN4-201ENST00000377575 EIF2S2P20042 333 aaKnown RBP21.93■■□□□ 1.1
HMGN4-201ENST00000377575 ARHGAP27Q6ZUM4 889 aa21.93■■□□□ 1.1
HMGN4-201ENST00000377575 CFAP44Q96MT7 982 aa21.93■■□□□ 1.1
HMGN4-201ENST00000377575 ATP10DQ9P241 1426 aa21.93■■□□□ 1.1
HMGN4-201ENST00000377575 ANKRD36CQ5JPF3 1778 aa21.92■■□□□ 1.1
HMGN4-201ENST00000377575 HOXB7P09629 217 aa21.91■■□□□ 1.1
HMGN4-201ENST00000377575 HLFQ16534 295 aa21.91■■□□□ 1.1
HMGN4-201ENST00000377575 TTLL6Q8N841 843 aa21.91■■□□□ 1.1
HMGN4-201ENST00000377575 TTLL7Q6ZT98 887 aa21.9■■□□□ 1.1
HMGN4-201ENST00000377575 IFT57Q9NWB7 429 aa21.9■■□□□ 1.1
HMGN4-201ENST00000377575 SBF1O95248 1867 aa21.9■■□□□ 1.1
HMGN4-201ENST00000377575 TPTE2Q6XPS3 522 aa21.89■■□□□ 1.09
HMGN4-201ENST00000377575 CCDC24Q8N4L8 307 aa21.89■■□□□ 1.09
HMGN4-201ENST00000377575 GNAI1P63096 354 aa21.88■■□□□ 1.09
HMGN4-201ENST00000377575 ZBTB3Q9H5J0 574 aa21.88■■□□□ 1.09
HMGN4-201ENST00000377575 MBIPQ9NS73 344 aa21.88■■□□□ 1.09
HMGN4-201ENST00000377575 IBTKQ9P2D0 1353 aaPredicted RBP21.87■■□□□ 1.09
HMGN4-201ENST00000377575 PDIA6Q15084 440 aa21.87■■□□□ 1.09
HMGN4-201ENST00000377575 KRT24Q2M2I5 525 aa21.87■■□□□ 1.09
HMGN4-201ENST00000377575 NECTIN2Q92692 538 aa21.87■■□□□ 1.09
HMGN4-201ENST00000377575 ZNF622Q969S3 477 aaKnown RBP eCLIP21.87■■□□□ 1.09
HMGN4-201ENST00000377575 NYXQ9GZU5 481 aa21.87■■□□□ 1.09
HMGN4-201ENST00000377575 ZNF853P0CG23 659 aa21.86■■□□□ 1.09
HMGN4-201ENST00000377575 PROSER3Q2NL68 480 aa21.86■■□□□ 1.09
HMGN4-201ENST00000377575 HDGFL1Q5TGJ6 251 aa21.86■■□□□ 1.09
HMGN4-201ENST00000377575 LRP10Q7Z4F1 713 aa21.86■■□□□ 1.09
HMGN4-201ENST00000377575 TNRC6CQ9HCJ0 1690 aaKnown RBP21.85■■□□□ 1.09
HMGN4-201ENST00000377575 FAM177BA6PVY3 158 aa21.85■■□□□ 1.09
HMGN4-201ENST00000377575 GTF2E1P29083 439 aaPredicted RBP21.85■■□□□ 1.09
HMGN4-201ENST00000377575 GIGYF2Q6Y7W6 1299 aaKnown RBP21.85■■□□□ 1.09
HMGN4-201ENST00000377575 DDX21Q9NR30 783 aaKnown RBP eCLIP21.85■■□□□ 1.09
HMGN4-201ENST00000377575 FER1L6Q2WGJ9 1857 aa21.84■■□□□ 1.09
HMGN4-201ENST00000377575 CCDC88AQ3V6T2 1871 aa21.84■■□□□ 1.09
HMGN4-201ENST00000377575 ANXA1P04083 346 aa21.84■■□□□ 1.09
HMGN4-201ENST00000377575 CCDC27Q2M243 656 aa21.84■■□□□ 1.09
HMGN4-201ENST00000377575 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
HMGN4-201ENST00000377575 CNKSR1Q969H4 720 aa21.84■■□□□ 1.09
HMGN4-201ENST00000377575 MASTLQ96GX5 879 aa21.84■■□□□ 1.09
HMGN4-201ENST00000377575 GPBP1L1Q9HC44 474 aaPredicted RBP21.84■■□□□ 1.09
HMGN4-201ENST00000377575 SLX4Q8IY92 1834 aa21.84■■□□□ 1.09
HMGN4-201ENST00000377575 SRGNP10124 158 aa21.83■■□□□ 1.09
HMGN4-201ENST00000377575 DUSP27Q5VZP5 1158 aa21.83■■□□□ 1.09
HMGN4-201ENST00000377575 CHPF2Q9P2E5 772 aa21.83■■□□□ 1.09
HMGN4-201ENST00000377575 TIAM2Q8IVF5 1701 aa21.83■■□□□ 1.08
HMGN4-201ENST00000377575 UBN2Q6ZU65 1347 aa21.82■■□□□ 1.08
HMGN4-201ENST00000377575 RIC1Q4ADV7 1423 aa21.82■■□□□ 1.08
HMGN4-201ENST00000377575 GPTP24298 496 aa21.82■■□□□ 1.08
HMGN4-201ENST00000377575 C9orf131Q5VYM1 1079 aa21.82■■□□□ 1.08
HMGN4-201ENST00000377575 XAGE3Q8WTP9 111 aa21.82■■□□□ 1.08
HMGN4-201ENST00000377575 DBF4Q9UBU7 674 aaPredicted RBP21.82■■□□□ 1.08
HMGN4-201ENST00000377575 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
HMGN4-201ENST00000377575 PARP10Q53GL7 1025 aa21.81■■□□□ 1.08
HMGN4-201ENST00000377575 HSP90AB3PQ58FF7 597 aa21.81■■□□□ 1.08
HMGN4-201ENST00000377575 COPS6Q7L5N1 327 aa21.81■■□□□ 1.08
HMGN4-201ENST00000377575 ZNF34Q8IZ26 560 aa21.81■■□□□ 1.08
HMGN4-201ENST00000377575 ZNF526Q8TF50 670 aaPredicted RBP21.81■■□□□ 1.08
HMGN4-201ENST00000377575 ABCC12Q96J65 1359 aa21.8■■□□□ 1.08
HMGN4-201ENST00000377575 KLRG2A4D1S0 409 aaPredicted RBP21.8■■□□□ 1.08
HMGN4-201ENST00000377575 NPR1P16066 1061 aa21.8■■□□□ 1.08
HMGN4-201ENST00000377575 AIMP1Q12904 312 aaKnown RBP21.8■■□□□ 1.08
HMGN4-201ENST00000377575 PPP1R42Q7Z4L9 355 aa21.8■■□□□ 1.08
HMGN4-201ENST00000377575 RNF181Q9P0P0 153 aa21.8■■□□□ 1.08
HMGN4-201ENST00000377575 DICER1Q9UPY3 1922 aaKnown RBP21.79■■□□□ 1.08
HMGN4-201ENST00000377575 RASSF7Q02833 373 aa21.79■■□□□ 1.08
HMGN4-201ENST00000377575 PRPF40BQ6NWY9 871 aaKnown RBP21.79■■□□□ 1.08
HMGN4-201ENST00000377575 SOGA3Q5TF21 947 aa21.78■■□□□ 1.08
HMGN4-201ENST00000377575 NUTM1Q86Y26 1132 aa21.78■■□□□ 1.08
HMGN4-201ENST00000377575 WWC1Q8IX03 1113 aa21.78■■□□□ 1.08
HMGN4-201ENST00000377575 CHMP4AQ9BY43 222 aa21.78■■□□□ 1.08
HMGN4-201ENST00000377575 HYPKQ9NX55 129 aa21.78■■□□□ 1.08
HMGN4-201ENST00000377575 C21orf2O43822 256 aa21.77■■□□□ 1.08
HMGN4-201ENST00000377575 NTSR2O95665 410 aa21.77■■□□□ 1.08
HMGN4-201ENST00000377575 ERFEQ4G0M1 354 aa21.77■■□□□ 1.08
HMGN4-201ENST00000377575 SUSD4Q5VX71 490 aa21.77■■□□□ 1.08
HMGN4-201ENST00000377575 RNF123Q5XPI4 1314 aa21.77■■□□□ 1.07
HMGN4-201ENST00000377575 ZC3H4Q9UPT8 1303 aaKnown RBP21.77■■□□□ 1.07
HMGN4-201ENST00000377575 LMNB1P20700 586 aa21.76■■□□□ 1.07
HMGN4-201ENST00000377575 ZNF219Q9P2Y4 722 aaPredicted RBP21.76■■□□□ 1.07
HMGN4-201ENST00000377575 IL16Q14005 1332 aa21.76■■□□□ 1.07
HMGN4-201ENST00000377575 LAMB2P55268 1798 aa21.75■■□□□ 1.07
HMGN4-201ENST00000377575 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
HMGN4-201ENST00000377575 C1QTNF8P60827 252 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms