RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 NEXNQ0ZGT2 675 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 ADCK5Q3MIX3 580 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 AKAP4Q5JQC9 854 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 FAM173BQ6P4H8 233 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 ZNF830Q96NB3 372 aaPredicted RBP15.54■□□□□ 0.08
USP11-204ENST00000377107 STAP2Q9UGK3 403 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 LRSAM1Q6UWE0 723 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 KCNH5Q8NCM2 988 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
USP11-204ENST00000377107 DDX58O95786 925 aaKnown RBP15.53■□□□□ 0.08
USP11-204ENST00000377107 HSPA4P34932 840 aa15.53■□□□□ 0.08
USP11-204ENST00000377107 HSP90AA2PQ14568 343 aaPredicted RBP15.53■□□□□ 0.08
USP11-204ENST00000377107 NFATC2IPQ8NCF5 419 aa15.53■□□□□ 0.08
USP11-204ENST00000377107 LARGE1O95461 756 aa15.53■□□□□ 0.08
USP11-204ENST00000377107 ZNF445P59923 1031 aa15.53■□□□□ 0.08
USP11-204ENST00000377107 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
USP11-204ENST00000377107 AXIN2Q9Y2T1 843 aa15.53■□□□□ 0.08
USP11-204ENST00000377107 ANAPC15P60006 121 aa15.52■□□□□ 0.08
USP11-204ENST00000377107 SUCLG2Q96I99 432 aa15.52■□□□□ 0.08
USP11-204ENST00000377107 TLR7Q9NYK1 1049 aaKnown RBP15.52■□□□□ 0.08
USP11-204ENST00000377107 CYP46A1Q9Y6A2 500 aa15.52■□□□□ 0.08
USP11-204ENST00000377107 C3P01024 1663 aa15.52■□□□□ 0.08
USP11-204ENST00000377107 HSP90B1P14625 803 aaKnown RBP15.52■□□□□ 0.07
USP11-204ENST00000377107 SYT1P21579 422 aa15.52■□□□□ 0.07
USP11-204ENST00000377107 GJB2P29033 226 aa15.52■□□□□ 0.07
USP11-204ENST00000377107 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.07
USP11-204ENST00000377107 A0A0G2JS52 829 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 GOLGA6L4A6NEF3 574 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 STX6O43752 255 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 KSR2Q6VAB6 950 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 COPS6Q7L5N1 327 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 NEUROD6Q96NK8 337 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 USP25Q9UHP3 1055 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.51■□□□□ 0.07
USP11-204ENST00000377107 GIGYF1O75420 1035 aaPredicted RBP15.51■□□□□ 0.07
USP11-204ENST00000377107 RUFY3Q7L099 469 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 KRT28Q7Z3Y7 464 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 XAGE3Q8WTP9 111 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
USP11-204ENST00000377107 RAD50Q92878 1312 aa15.51■□□□□ 0.07
USP11-204ENST00000377107 GRM8O00222 908 aa15.5■□□□□ 0.07
USP11-204ENST00000377107 DNM1Q05193 864 aaKnown RBP15.5■□□□□ 0.07
USP11-204ENST00000377107 NMIQ13287 307 aaPredicted RBP15.5■□□□□ 0.07
USP11-204ENST00000377107 FAM13BQ9NYF5 915 aa15.5■□□□□ 0.07
USP11-204ENST00000377107 MON2Q7Z3U7 1717 aa15.5■□□□□ 0.07
USP11-204ENST00000377107 CAMK4Q16566 473 aa15.5■□□□□ 0.07
USP11-204ENST00000377107 GIMAP6Q6P9H5 292 aa15.5■□□□□ 0.07
USP11-204ENST00000377107 EAF2Q96CJ1 260 aaPredicted RBP15.5■□□□□ 0.07
USP11-204ENST00000377107 LSG1Q9H089 658 aaKnown RBP15.5■□□□□ 0.07
USP11-204ENST00000377107 TFIP11Q9UBB9 837 aaKnown RBP15.5■□□□□ 0.07
USP11-204ENST00000377107 RBM8AQ9Y5S9 174 aaKnown RBP15.5■□□□□ 0.07
USP11-204ENST00000377107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.5■□□□□ 0.07
USP11-204ENST00000377107 SSH2Q76I76 1423 aa15.49■□□□□ 0.07
USP11-204ENST00000377107 CEBPZQ03701 1054 aaKnown RBP15.49■□□□□ 0.07
USP11-204ENST00000377107 POLA2Q14181 598 aa15.49■□□□□ 0.07
USP11-204ENST00000377107 CLEC17AQ6ZS10 378 aa15.49■□□□□ 0.07
USP11-204ENST00000377107 UBE3BQ7Z3V4 1068 aa15.49■□□□□ 0.07
USP11-204ENST00000377107 CCDC85AQ96PX6 553 aaPredicted RBP15.49■□□□□ 0.07
USP11-204ENST00000377107 CHMP4AQ9BY43 222 aa15.49■□□□□ 0.07
USP11-204ENST00000377107 SETD1AO15047 1707 aaKnown RBP15.49■□□□□ 0.07
USP11-204ENST00000377107 AMOTQ4VCS5 1084 aa15.49■□□□□ 0.07
USP11-204ENST00000377107 LARP1BQ659C4 914 aaKnown RBP15.49■□□□□ 0.07
USP11-204ENST00000377107 LRRC2Q9BYS8 371 aa15.49■□□□□ 0.07
USP11-204ENST00000377107 CUL4AQ13619 759 aa15.48■□□□□ 0.07
USP11-204ENST00000377107 ZSCAN22P10073 491 aaPredicted RBP15.48■□□□□ 0.07
USP11-204ENST00000377107 PRKCSHP14314 528 aaPredicted RBP15.48■□□□□ 0.07
USP11-204ENST00000377107 CHGBP05060 677 aa15.48■□□□□ 0.07
USP11-204ENST00000377107 DDX11Q96FC9 970 aa15.48■□□□□ 0.07
USP11-204ENST00000377107 INTS4Q96HW7 963 aaKnown RBP15.48■□□□□ 0.07
USP11-204ENST00000377107 PHF14O94880 888 aa15.47■□□□□ 0.07
USP11-204ENST00000377107 PPP1R9BQ96SB3 815 aa15.47■□□□□ 0.07
USP11-204ENST00000377107 DIP2AQ14689 1571 aa15.47■□□□□ 0.07
USP11-204ENST00000377107 SPC24Q8NBT2 197 aa15.47■□□□□ 0.07
USP11-204ENST00000377107 ADCY9O60503 1353 aa15.47■□□□□ 0.07
USP11-204ENST00000377107 COL9A3Q14050 684 aaPredicted RBP15.46■□□□□ 0.07
USP11-204ENST00000377107 ERC1Q8IUD2 1116 aa15.46■□□□□ 0.07
USP11-204ENST00000377107 HYPKQ9NX55 129 aa15.46■□□□□ 0.07
USP11-204ENST00000377107 CCDC129Q6ZRS4 1044 aa15.46■□□□□ 0.07
USP11-204ENST00000377107 LINS1Q8NG48 757 aa15.46■□□□□ 0.07
USP11-204ENST00000377107 BCL11BQ9C0K0 894 aaPredicted RBP15.46■□□□□ 0.07
USP11-204ENST00000377107 USP16Q9Y5T5 823 aa15.46■□□□□ 0.07
USP11-204ENST00000377107 NRKQ7Z2Y5 1582 aa15.46■□□□□ 0.07
USP11-204ENST00000377107 TATP17735 454 aaPredicted RBP15.46■□□□□ 0.06
USP11-204ENST00000377107 BLOC1S2Q6QNY1 142 aa15.46■□□□□ 0.06
USP11-204ENST00000377107 C17orf53Q8N3J3 647 aaPredicted RBP15.46■□□□□ 0.06
USP11-204ENST00000377107 EVI5LQ96CN4 794 aa15.46■□□□□ 0.06
USP11-204ENST00000377107 A0A0D9SFI3 127 aa15.45■□□□□ 0.06
USP11-204ENST00000377107 DDX46Q7L014 1031 aaKnown RBP15.45■□□□□ 0.06
USP11-204ENST00000377107 FBXW7Q969H0 707 aa15.45■□□□□ 0.06
USP11-204ENST00000377107 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
USP11-204ENST00000377107 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
USP11-204ENST00000377107 SASH1O94885 1247 aa15.45■□□□□ 0.06
USP11-204ENST00000377107 CREB3L3Q68CJ9 461 aa15.45■□□□□ 0.06
USP11-204ENST00000377107 HDAC5Q9UQL6 1122 aa15.45■□□□□ 0.06
USP11-204ENST00000377107 ATP6V1DQ9Y5K8 247 aa15.45■□□□□ 0.06
USP11-204ENST00000377107 F13A1P00488 732 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 ME3Q16798 604 aa15.44■□□□□ 0.06
USP11-204ENST00000377107 A0A087WZG4 1122 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms