RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PDE4BQ07343 736 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 ECHDC1Q9NTX5 307 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 ANKRD62A6NC57 917 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 DNAI2Q9GZS0 605 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 PHAXQ9H814 394 aaKnown RBP15.86■□□□□ 0.13
GPC6-201ENST00000377047 CHPF2Q9P2E5 772 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 KIAA1328Q86T90 577 aa15.85■□□□□ 0.13
GPC6-201ENST00000377047 KAT14Q9H8E8 782 aa15.85■□□□□ 0.13
GPC6-201ENST00000377047 MAP3K11Q16584 847 aa15.85■□□□□ 0.13
GPC6-201ENST00000377047 KLHL10Q6JEL2 608 aa15.85■□□□□ 0.13
GPC6-201ENST00000377047 TRMT1LQ7Z2T5 733 aaKnown RBP15.85■□□□□ 0.13
GPC6-201ENST00000377047 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
GPC6-201ENST00000377047 HAND2P61296 217 aa15.85■□□□□ 0.13
GPC6-201ENST00000377047 TMEM67Q5HYA8 995 aa15.85■□□□□ 0.13
GPC6-201ENST00000377047 ZNF397Q8NF99 534 aaPredicted RBP15.85■□□□□ 0.13
GPC6-201ENST00000377047 SH2B1Q9NRF2 756 aaPredicted RBP15.85■□□□□ 0.13
GPC6-201ENST00000377047 A2MP01023 1474 aa15.85■□□□□ 0.13
GPC6-201ENST00000377047 GSTO1P78417 241 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 LARP6Q9BRS8 491 aaKnown RBP15.84■□□□□ 0.13
GPC6-201ENST00000377047 CFAP100Q494V2 611 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 CIZ1Q9ULV3 898 aaPredicted RBP15.84■□□□□ 0.13
GPC6-201ENST00000377047 NCKAP5LQ9HCH0 1330 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 GOLGA6L10A6NI86 522 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 F8W031 263 aaPredicted RBP15.84■□□□□ 0.13
GPC6-201ENST00000377047 HSPA2P54652 639 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 FILIP1Q7Z7B0 1213 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 XAGE3Q8WTP9 111 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 GPATCH8Q9UKJ3 1502 aaKnown RBP15.84■□□□□ 0.13
GPC6-201ENST00000377047 BAG4O95429 457 aaKnown RBP15.84■□□□□ 0.13
GPC6-201ENST00000377047 PLCH2O75038 1416 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 MFSD6Q6ZSS7 791 aa15.84■□□□□ 0.13
GPC6-201ENST00000377047 SMARCC1Q92922 1105 aaPredicted RBP15.84■□□□□ 0.13
GPC6-201ENST00000377047 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.13
GPC6-201ENST00000377047 CRNKL1Q9BZJ0 848 aaKnown RBP15.83■□□□□ 0.12
GPC6-201ENST00000377047 KIF5BP33176 963 aa15.83■□□□□ 0.12
GPC6-201ENST00000377047 MAP3K1Q13233 1512 aa15.83■□□□□ 0.12
GPC6-201ENST00000377047 UQCRFS1P1P0C7P4 283 aa15.83■□□□□ 0.12
GPC6-201ENST00000377047 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.12
GPC6-201ENST00000377047 TSHZ3Q63HK5 1081 aa15.82■□□□□ 0.12
GPC6-201ENST00000377047 DUOX2Q9NRD8 1548 aa15.82■□□□□ 0.12
GPC6-201ENST00000377047 WWC3Q9ULE0 1092 aa15.82■□□□□ 0.12
GPC6-201ENST00000377047 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
GPC6-201ENST00000377047 COPS6Q7L5N1 327 aa15.82■□□□□ 0.12
GPC6-201ENST00000377047 TAF4BQ92750 862 aa15.82■□□□□ 0.12
GPC6-201ENST00000377047 LRRC59Q96AG4 307 aaKnown RBP15.82■□□□□ 0.12
GPC6-201ENST00000377047 GRM1Q13255 1194 aa15.82■□□□□ 0.12
GPC6-201ENST00000377047 TMEM87AQ8NBN3 555 aa15.82■□□□□ 0.12
GPC6-201ENST00000377047 CCDC12Q8WUD4 166 aaPredicted RBP15.82■□□□□ 0.12
GPC6-201ENST00000377047 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
GPC6-201ENST00000377047 IQSEC3Q9UPP2 1182 aaPredicted RBP15.82■□□□□ 0.12
GPC6-201ENST00000377047 SYCP2Q9BX26 1530 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 HMGN5P82970 282 aaKnown RBP15.81■□□□□ 0.12
GPC6-201ENST00000377047 RAB11FIP4Q86YS3 637 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 FKBP15Q5T1M5 1219 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 JAKMIP3Q5VZ66 844 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 ZNF518AQ6AHZ1 1483 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 IL2RBP14784 551 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 HDAC9Q9UKV0 1011 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 AKAP4Q5JQC9 854 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 LIMCH1Q9UPQ0 1083 aa15.81■□□□□ 0.12
GPC6-201ENST00000377047 CENPHQ9H3R5 247 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 MICU3Q86XE3 530 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 CCDC150Q8NCX0 1101 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 GRPEL1Q9HAV7 217 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 SAMM50Q9Y512 469 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 USP16Q9Y5T5 823 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 ATP10BO94823 1461 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 WDR7Q9Y4E6 1490 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 SIRT1Q96EB6 747 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 SKAP1Q86WV1 359 aa15.8■□□□□ 0.12
GPC6-201ENST00000377047 ENOX2Q16206 610 aaKnown RBP15.79■□□□□ 0.12
GPC6-201ENST00000377047 CACNA2D4Q7Z3S7 1137 aa15.79■□□□□ 0.12
GPC6-201ENST00000377047 SYCE3A1L190 88 aa15.79■□□□□ 0.12
GPC6-201ENST00000377047 CYP7A1P22680 504 aa15.79■□□□□ 0.12
GPC6-201ENST00000377047 IARSP41252 1262 aaKnown RBP15.79■□□□□ 0.12
GPC6-201ENST00000377047 ZRSR2Q15696 482 aaKnown RBP15.79■□□□□ 0.12
GPC6-201ENST00000377047 UTP14AQ9BVJ6 771 aaKnown RBP15.79■□□□□ 0.12
GPC6-201ENST00000377047 H0YHG0 523 aa15.79■□□□□ 0.12
GPC6-201ENST00000377047 NCOA7Q8NI08 942 aa15.79■□□□□ 0.12
GPC6-201ENST00000377047 SCAND2PQ9GZW5 306 aaPredicted RBP15.79■□□□□ 0.12
GPC6-201ENST00000377047 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
GPC6-201ENST00000377047 METAP2P50579 478 aaKnown RBP eCLIP15.78■□□□□ 0.12
GPC6-201ENST00000377047 PICALMQ13492 652 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 IQCEQ6IPM2 695 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 MCM4P33991 863 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 DZIP3Q86Y13 1208 aaKnown RBP15.78■□□□□ 0.12
GPC6-201ENST00000377047 MAP7D2Q96T17 732 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 TSPY3P0CV98 308 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 TSPY8P0CW00 308 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 ARHGAP29Q52LW3 1261 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 CALML4Q96GE6 196 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 PARP3Q9Y6F1 533 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
GPC6-201ENST00000377047 TAX1BP1Q86VP1 789 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms