RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 NECAB1Q8N987 351 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 TBC1D9Q6ZT07 1266 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 CCDC102AQ96A19 550 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 ERICH4A6NGS2 130 aa19.93■□□□□ 0.78
MCF2L-203ENST00000375604 TTC16Q8NEE8 873 aa19.93■□□□□ 0.78
MCF2L-203ENST00000375604 CCDC97Q96F63 343 aaPredicted RBP19.93■□□□□ 0.78
MCF2L-203ENST00000375604 CCDC178Q5BJE1 867 aa19.93■□□□□ 0.78
MCF2L-203ENST00000375604 CACNA2D4Q7Z3S7 1137 aa19.92■□□□□ 0.78
MCF2L-203ENST00000375604 ZNF397Q8NF99 534 aaPredicted RBP19.92■□□□□ 0.78
MCF2L-203ENST00000375604 CCDC113Q9H0I3 377 aa19.92■□□□□ 0.78
MCF2L-203ENST00000375604 CNNM3Q8NE01 707 aa19.92■□□□□ 0.78
MCF2L-203ENST00000375604 GOPCQ9HD26 462 aa19.92■□□□□ 0.78
MCF2L-203ENST00000375604 CCDC194A0A1B0GVG4 234 aa19.92■□□□□ 0.78
MCF2L-203ENST00000375604 HSP90AA4PQ58FG1 418 aa19.92■□□□□ 0.78
MCF2L-203ENST00000375604 ARHGAP29Q52LW3 1261 aa19.92■□□□□ 0.78
MCF2L-203ENST00000375604 CTNNBL1Q8WYA6 563 aaPredicted RBP19.92■□□□□ 0.78
MCF2L-203ENST00000375604 SPDYE4A6NLX3 237 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 TAF4BQ92750 862 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 MACROD2A1Z1Q3 448 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 RBM26Q5T8P6 1007 aaKnown RBP19.91■□□□□ 0.78
MCF2L-203ENST00000375604 USP16Q9Y5T5 823 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 NUP88Q99567 741 aaPredicted RBP19.91■□□□□ 0.78
MCF2L-203ENST00000375604 TSG101Q99816 390 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 KAT14Q9H8E8 782 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 PPP4R3AQ6IN85 833 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 C16orf71Q8IYS4 520 aaPredicted RBP19.91■□□□□ 0.78
MCF2L-203ENST00000375604 EVI5LQ96CN4 794 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 PRKCSHP14314 528 aaPredicted RBP19.91■□□□□ 0.78
MCF2L-203ENST00000375604 XAGE3Q8WTP9 111 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 GRIN2AQ12879 1464 aa19.91■□□□□ 0.78
MCF2L-203ENST00000375604 USP8P40818 1118 aa19.9■□□□□ 0.78
MCF2L-203ENST00000375604 FSIP1Q8NA03 581 aa19.9■□□□□ 0.78
MCF2L-203ENST00000375604 PA2G4Q9UQ80 394 aaKnown RBP19.9■□□□□ 0.78
MCF2L-203ENST00000375604 ST5P78524 1137 aa19.9■□□□□ 0.78
MCF2L-203ENST00000375604 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
MCF2L-203ENST00000375604 CCDC191Q8NCU4 936 aa19.89■□□□□ 0.78
MCF2L-203ENST00000375604 ZBTB9Q96C00 473 aa19.89■□□□□ 0.78
MCF2L-203ENST00000375604 CA8P35219 290 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 MFSD6Q6ZSS7 791 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 RIMBP2O15034 1052 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 MEIS3Q99687 375 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 CHST3Q7LGC8 479 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 NCKAP5LQ9HCH0 1330 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 SBNO2Q9Y2G9 1366 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 UBAP1LF5GYI3 381 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 TNNQ9UQP3 1299 aa19.89■□□□□ 0.77
MCF2L-203ENST00000375604 COPS6Q7L5N1 327 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 CASQ1P31415 396 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 TNPO1Q92973 898 aaKnown RBP19.88■□□□□ 0.77
MCF2L-203ENST00000375604 PSMD1Q99460 953 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 LIMCH1Q9UPQ0 1083 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 ANKRD13DQ6ZTN6 518 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 HELBQ8NG08 1087 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-203ENST00000375604 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
MCF2L-203ENST00000375604 TBC1D2Q9BYX2 928 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 SNRPA1P09661 255 aaKnown RBP19.88■□□□□ 0.77
MCF2L-203ENST00000375604 METAP2P50579 478 aaKnown RBP eCLIP19.88■□□□□ 0.77
MCF2L-203ENST00000375604 SPA17Q15506 151 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 CDC5LQ99459 802 aaKnown RBP19.88■□□□□ 0.77
MCF2L-203ENST00000375604 CLIP2Q9UDT6 1046 aa19.88■□□□□ 0.77
MCF2L-203ENST00000375604 PTPRCP08575 1304 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 FKBP15Q5T1M5 1219 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 HSPA2P54652 639 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 TMEM266Q2M3C6 531 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 JAKMIP3Q5VZ66 844 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 CWC15Q9P013 229 aaKnown RBP19.87■□□□□ 0.77
MCF2L-203ENST00000375604 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
MCF2L-203ENST00000375604 PPP1R12BO60237 982 aaPredicted RBP19.87■□□□□ 0.77
MCF2L-203ENST00000375604 IDEP14735 1019 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 TCERG1LQ5VWI1 586 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 GBP2P32456 591 aaPredicted RBP19.87■□□□□ 0.77
MCF2L-203ENST00000375604 TDRD12Q587J7 1177 aaKnown RBP19.87■□□□□ 0.77
MCF2L-203ENST00000375604 ECHDC1Q9NTX5 307 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 KRT24Q2M2I5 525 aa19.87■□□□□ 0.77
MCF2L-203ENST00000375604 PPIP5K1Q6PFW1 1433 aa19.86■□□□□ 0.77
MCF2L-203ENST00000375604 PUF60Q9UHX1 559 aaKnown RBP19.86■□□□□ 0.77
MCF2L-203ENST00000375604 STX8Q9UNK0 236 aa19.86■□□□□ 0.77
MCF2L-203ENST00000375604 CCDC183Q5T5S1 534 aa19.86■□□□□ 0.77
MCF2L-203ENST00000375604 BCCIPQ9P287 314 aaKnown RBP eCLIP19.86■□□□□ 0.77
MCF2L-203ENST00000375604 USP25Q9UHP3 1055 aa19.86■□□□□ 0.77
MCF2L-203ENST00000375604 SLC4A4Q9Y6R1 1079 aa19.86■□□□□ 0.77
MCF2L-203ENST00000375604 CYP7A1P22680 504 aa19.86■□□□□ 0.77
MCF2L-203ENST00000375604 LRPPRCP42704 1394 aaKnown RBP19.86■□□□□ 0.77
MCF2L-203ENST00000375604 SCAF11Q99590 1463 aaKnown RBP19.86■□□□□ 0.77
MCF2L-203ENST00000375604 CCDC196A0A1B0GTZ2 297 aa19.86■□□□□ 0.77
MCF2L-203ENST00000375604 DENND4BO75064 1496 aaPredicted RBP19.86■□□□□ 0.77
MCF2L-203ENST00000375604 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
MCF2L-203ENST00000375604 TOP1P11387 765 aaKnown RBP19.85■□□□□ 0.77
MCF2L-203ENST00000375604 C8orf58Q8NAV2 365 aa19.85■□□□□ 0.77
MCF2L-203ENST00000375604 CCDC148Q8NFR7 591 aa19.85■□□□□ 0.77
MCF2L-203ENST00000375604 NEK1Q96PY6 1258 aa19.85■□□□□ 0.77
MCF2L-203ENST00000375604 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
MCF2L-203ENST00000375604 CUL7Q14999 1698 aa19.85■□□□□ 0.77
MCF2L-203ENST00000375604 SETDB2Q96T68 719 aa19.85■□□□□ 0.77
MCF2L-203ENST00000375604 TSPY3P0CV98 308 aa19.85■□□□□ 0.77
MCF2L-203ENST00000375604 TSPY8P0CW00 308 aa19.85■□□□□ 0.77
MCF2L-203ENST00000375604 NIP7Q9Y221 180 aaKnown RBP eCLIP19.85■□□□□ 0.77
MCF2L-203ENST00000375604 TERF1P54274 439 aa19.84■□□□□ 0.77
MCF2L-203ENST00000375604 MAPK8IP2Q13387 824 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms