RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 TWISTNBQ3B726 338 aaPredicted RBP26.11■■□□□ 1.77
SYNC-201ENST00000373484 USPL1Q5W0Q7 1092 aa26.11■■□□□ 1.77
SYNC-201ENST00000373484 ZBTB47Q9UFB7 747 aaPredicted RBP26.11■■□□□ 1.77
SYNC-201ENST00000373484 RCAN3Q9UKA8 241 aa26.11■■□□□ 1.77
SYNC-201ENST00000373484 TBC1D2BQ9UPU7 963 aa26.11■■□□□ 1.77
SYNC-201ENST00000373484 CACNA1FO60840 1977 aa26.11■■□□□ 1.77
SYNC-201ENST00000373484 EXOSC9Q06265 439 aaKnown RBP26.11■■□□□ 1.77
SYNC-201ENST00000373484 PROSER3Q2NL68 480 aa26.11■■□□□ 1.77
SYNC-201ENST00000373484 LRP10Q7Z4F1 713 aa26.11■■□□□ 1.77
SYNC-201ENST00000373484 DZIP3Q86Y13 1208 aaKnown RBP26.1■■□□□ 1.77
SYNC-201ENST00000373484 NLGN1Q8N2Q7 840 aa26.1■■□□□ 1.77
SYNC-201ENST00000373484 CDCA7LQ96GN5 454 aa26.1■■□□□ 1.77
SYNC-201ENST00000373484 DDX21Q9NR30 783 aaKnown RBP eCLIP26.1■■□□□ 1.77
SYNC-201ENST00000373484 CHPF2Q9P2E5 772 aa26.1■■□□□ 1.77
SYNC-201ENST00000373484 NUP98P52948 1817 aa26.1■■□□□ 1.77
SYNC-201ENST00000373484 ANXA1P04083 346 aa26.09■■□□□ 1.77
SYNC-201ENST00000373484 CHMP4AQ9BY43 222 aa26.09■■□□□ 1.77
SYNC-201ENST00000373484 BCL2L12Q9HB09 334 aa26.09■■□□□ 1.77
SYNC-201ENST00000373484 DBF4Q9UBU7 674 aaPredicted RBP26.09■■□□□ 1.77
SYNC-201ENST00000373484 CAMTA2O94983 1202 aa26.08■■□□□ 1.77
SYNC-201ENST00000373484 POLD1P28340 1107 aa26.08■■□□□ 1.77
SYNC-201ENST00000373484 ARXQ96QS3 562 aa26.08■■□□□ 1.77
SYNC-201ENST00000373484 TRMT2AQ8IZ69 625 aaKnown RBP26.07■■□□□ 1.76
SYNC-201ENST00000373484 CCDC30Q5VVM6 783 aa26.06■■□□□ 1.76
SYNC-201ENST00000373484 VAMP4O75379 141 aa26.05■■□□□ 1.76
SYNC-201ENST00000373484 TTLL7Q6ZT98 887 aa26.04■■□□□ 1.76
SYNC-201ENST00000373484 AFDNP55196 1824 aaKnown RBP26.04■■□□□ 1.76
SYNC-201ENST00000373484 RGL2O15211 777 aa26.04■■□□□ 1.76
SYNC-201ENST00000373484 MMP10P09238 476 aa26.03■■□□□ 1.76
SYNC-201ENST00000373484 HYPKQ9NX55 129 aa26.03■■□□□ 1.76
SYNC-201ENST00000373484 KIF6Q6ZMV9 814 aa26.02■■□□□ 1.76
SYNC-201ENST00000373484 MAP3K15Q6ZN16 1313 aa26.02■■□□□ 1.76
SYNC-201ENST00000373484 TM4SF1P30408 202 aa26.02■■□□□ 1.76
SYNC-201ENST00000373484 CLEC4GQ6UXB4 293 aa26.02■■□□□ 1.76
SYNC-201ENST00000373484 COPS6Q7L5N1 327 aa26.02■■□□□ 1.76
SYNC-201ENST00000373484 ANKRD36CQ5JPF3 1778 aa26.02■■□□□ 1.76
SYNC-201ENST00000373484 ERVV-1B6SEH8 477 aa26.01■■□□□ 1.75
SYNC-201ENST00000373484 XAGE3Q8WTP9 111 aa26.01■■□□□ 1.75
SYNC-201ENST00000373484 NRXN2Q9P2S2 1712 aa26.01■■□□□ 1.75
SYNC-201ENST00000373484 PPP1R1BQ9UD71 204 aaPredicted RBP26.01■■□□□ 1.75
SYNC-201ENST00000373484 ZNF652Q9Y2D9 606 aa26■■□□□ 1.75
SYNC-201ENST00000373484 ARFGEF2Q9Y6D5 1785 aa26■■□□□ 1.75
SYNC-201ENST00000373484 NFIXQ14938 502 aa26■■□□□ 1.75
SYNC-201ENST00000373484 STK31Q9BXU1 1019 aa26■■□□□ 1.75
SYNC-201ENST00000373484 KIF13BQ9NQT8 1826 aa25.99■■□□□ 1.75
SYNC-201ENST00000373484 DDR1Q08345 913 aa25.99■■□□□ 1.75
SYNC-201ENST00000373484 AIMP1Q12904 312 aaKnown RBP25.99■■□□□ 1.75
SYNC-201ENST00000373484 HLFQ16534 295 aa25.99■■□□□ 1.75
SYNC-201ENST00000373484 RTL5Q5HYW3 569 aaPredicted RBP25.99■■□□□ 1.75
SYNC-201ENST00000373484 TBC1D9BQ66K14 1250 aa25.99■■□□□ 1.75
SYNC-201ENST00000373484 ZBTB3Q9H5J0 574 aa25.98■■□□□ 1.75
SYNC-201ENST00000373484 PARP3Q9Y6F1 533 aa25.98■■□□□ 1.75
SYNC-201ENST00000373484 POLRMTO00411 1230 aaKnown RBP25.98■■□□□ 1.75
SYNC-201ENST00000373484 EXOC6Q8TAG9 804 aa25.98■■□□□ 1.75
SYNC-201ENST00000373484 PHAXQ9H814 394 aaKnown RBP25.97■■□□□ 1.75
SYNC-201ENST00000373484 BICDL1Q6ZP65 573 aa25.95■■□□□ 1.75
SYNC-201ENST00000373484 BACH2Q9BYV9 841 aa25.95■■□□□ 1.75
SYNC-201ENST00000373484 ATP10DQ9P241 1426 aa25.95■■□□□ 1.75
SYNC-201ENST00000373484 SLC4A2P04920 1241 aa25.95■■□□□ 1.74
SYNC-201ENST00000373484 GIGYF2Q6Y7W6 1299 aaKnown RBP25.95■■□□□ 1.74
SYNC-201ENST00000373484 CARMIL3Q8ND23 1372 aa25.94■■□□□ 1.74
SYNC-201ENST00000373484 PDE4AP27815 886 aa25.93■■□□□ 1.74
SYNC-201ENST00000373484 ANKRD13DQ6ZTN6 518 aa25.93■■□□□ 1.74
SYNC-201ENST00000373484 PLBD2Q8NHP8 589 aa25.93■■□□□ 1.74
SYNC-201ENST00000373484 SETDB2Q96T68 719 aa25.93■■□□□ 1.74
SYNC-201ENST00000373484 FHDC1Q9C0D6 1143 aaPredicted RBP25.93■■□□□ 1.74
SYNC-201ENST00000373484 CT47B1P0C2W7 299 aaPredicted RBP25.92■■□□□ 1.74
SYNC-201ENST00000373484 ZNF428Q96B54 188 aa25.92■■□□□ 1.74
SYNC-201ENST00000373484 SERPINB2P05120 415 aa25.91■■□□□ 1.74
SYNC-201ENST00000373484 NIP7Q9Y221 180 aaKnown RBP eCLIP25.91■■□□□ 1.74
SYNC-201ENST00000373484 C10orf71Q711Q0 1435 aa25.91■■□□□ 1.74
SYNC-201ENST00000373484 G2E3Q7L622 706 aa25.91■■□□□ 1.74
SYNC-201ENST00000373484 KIAA1551Q9HCM1 1747 aa25.9■■□□□ 1.74
SYNC-201ENST00000373484 NBR1Q14596 966 aa25.89■■□□□ 1.74
SYNC-201ENST00000373484 ZNF34Q8IZ26 560 aa25.89■■□□□ 1.74
SYNC-201ENST00000373484 CD2APQ9Y5K6 639 aa25.89■■□□□ 1.74
SYNC-201ENST00000373484 DDX58O95786 925 aaKnown RBP25.88■■□□□ 1.73
SYNC-201ENST00000373484 HSP90AB3PQ58FF7 597 aa25.88■■□□□ 1.73
SYNC-201ENST00000373484 KLHL34Q8N239 644 aa25.88■■□□□ 1.73
SYNC-201ENST00000373484 SYT17Q9BSW7 474 aa25.88■■□□□ 1.73
SYNC-201ENST00000373484 ANKRD31Q8N7Z5 1873 aa25.88■■□□□ 1.73
SYNC-201ENST00000373484 FLIIQ13045 1269 aa25.88■■□□□ 1.73
SYNC-201ENST00000373484 TCIRG1Q13488 830 aa25.87■■□□□ 1.73
SYNC-201ENST00000373484 RIC3Q7Z5B4 369 aa25.87■■□□□ 1.73
SYNC-201ENST00000373484 UBN2Q6ZU65 1347 aa25.87■■□□□ 1.73
SYNC-201ENST00000373484 GPTP24298 496 aa25.86■■□□□ 1.73
SYNC-201ENST00000373484 N4BP2Q86UW6 1770 aaPredicted RBP25.86■■□□□ 1.73
SYNC-201ENST00000373484 ALDH1L2Q3SY69 923 aa25.86■■□□□ 1.73
SYNC-201ENST00000373484 DDRGK1Q96HY6 314 aa25.86■■□□□ 1.73
SYNC-201ENST00000373484 ADCY9O60503 1353 aa25.85■■□□□ 1.73
SYNC-201ENST00000373484 SSH1Q8WYL5 1049 aa25.85■■□□□ 1.73
SYNC-201ENST00000373484 PRR5LQ6MZQ0 368 aa25.84■■□□□ 1.73
SYNC-201ENST00000373484 KSR2Q6VAB6 950 aa25.84■■□□□ 1.73
SYNC-201ENST00000373484 NBPF5PQ86XG9 351 aaPredicted RBP25.84■■□□□ 1.73
SYNC-201ENST00000373484 IBTKQ9P2D0 1353 aaPredicted RBP25.84■■□□□ 1.73
SYNC-201ENST00000373484 PI4KAP2A4QPH2 592 aa25.84■■□□□ 1.73
SYNC-201ENST00000373484 PARP10Q53GL7 1025 aa25.84■■□□□ 1.73
SYNC-201ENST00000373484 MRPL50Q8N5N7 158 aaKnown RBP25.84■■□□□ 1.73
SYNC-201ENST00000373484 PI4KAP1Q8N8J0 262 aa25.84■■□□□ 1.73
SYNC-201ENST00000373484 CNBD1Q8NA66 436 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms