RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ARFGEF2Q9Y6D5 1785 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 RBM25P49756 843 aaKnown RBP30.79■■■□□ 2.52
CTSA-203ENST00000372459 RHPN1Q8TCX5 695 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 PIGBQ92521 554 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 LRP6O75581 1613 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 NRAPQ86VF7 1730 aa30.79■■■□□ 2.52
CTSA-203ENST00000372459 THRAP3Q9Y2W1 955 aaKnown RBP30.77■■■□□ 2.52
CTSA-203ENST00000372459 CASC1Q6TDU7 716 aa30.77■■■□□ 2.52
CTSA-203ENST00000372459 STAP2Q9UGK3 403 aa30.77■■■□□ 2.52
CTSA-203ENST00000372459 ITGB4P16144 1822 aa30.76■■■□□ 2.52
CTSA-203ENST00000372459 SPATA31A1Q5TZJ5 1347 aa30.76■■■□□ 2.51
CTSA-203ENST00000372459 A1BGP04217 495 aa30.75■■■□□ 2.51
CTSA-203ENST00000372459 VSIG10Q8N0Z9 540 aa30.75■■■□□ 2.51
CTSA-203ENST00000372459 IL1RAPL2Q9NP60 686 aa30.75■■■□□ 2.51
CTSA-203ENST00000372459 NUTM2BA6NNL0 878 aaPredicted RBP30.75■■■□□ 2.51
CTSA-203ENST00000372459 NUTM2EB1AL46 878 aaPredicted RBP30.75■■■□□ 2.51
CTSA-203ENST00000372459 NUTM2AQ8IVF1 878 aaPredicted RBP30.75■■■□□ 2.51
CTSA-203ENST00000372459 KAZALD1Q96I82 304 aa30.75■■■□□ 2.51
CTSA-203ENST00000372459 TEX13AQ9BXU3 409 aaPredicted RBP30.75■■■□□ 2.51
CTSA-203ENST00000372459 BICC1Q9H694 974 aaKnown RBP30.75■■■□□ 2.51
CTSA-203ENST00000372459 AOX1Q06278 1338 aa30.74■■■□□ 2.51
CTSA-203ENST00000372459 ASAP1Q9ULH1 1129 aa30.74■■■□□ 2.51
CTSA-203ENST00000372459 AFDNP55196 1824 aaKnown RBP30.73■■■□□ 2.51
CTSA-203ENST00000372459 ATG3Q9NT62 314 aa30.73■■■□□ 2.51
CTSA-203ENST00000372459 OS9Q13438 667 aaPredicted RBP30.72■■■□□ 2.51
CTSA-203ENST00000372459 BCL9O00512 1426 aa30.72■■■□□ 2.51
CTSA-203ENST00000372459 NWD2Q9ULI1 1742 aa30.71■■■□□ 2.51
CTSA-203ENST00000372459 ERC1Q8IUD2 1116 aa30.71■■■□□ 2.51
CTSA-203ENST00000372459 UBAP1LF5GYI3 381 aa30.7■■■□□ 2.51
CTSA-203ENST00000372459 TSHZ3Q63HK5 1081 aa30.7■■■□□ 2.5
CTSA-203ENST00000372459 TTLL7Q6ZT98 887 aa30.69■■■□□ 2.5
CTSA-203ENST00000372459 TUBGCP6Q96RT7 1819 aa30.69■■■□□ 2.5
CTSA-203ENST00000372459 NUP188Q5SRE5 1749 aa30.69■■■□□ 2.5
CTSA-203ENST00000372459 COL15A1P39059 1388 aa30.69■■■□□ 2.5
CTSA-203ENST00000372459 SLIT2O94813 1529 aa30.68■■■□□ 2.5
CTSA-203ENST00000372459 ATP5J2-PTCD1G3V325 749 aa30.68■■■□□ 2.5
CTSA-203ENST00000372459 NUTM1Q86Y26 1132 aa30.68■■■□□ 2.5
CTSA-203ENST00000372459 DDB1Q16531 1140 aa30.67■■■□□ 2.5
CTSA-203ENST00000372459 RBM42Q9BTD8 480 aaKnown RBP30.67■■■□□ 2.5
CTSA-203ENST00000372459 SPATA31A5Q5VU36 1347 aa30.67■■■□□ 2.5
CTSA-203ENST00000372459 SPATA31A7Q8IWB4 1347 aa30.67■■■□□ 2.5
CTSA-203ENST00000372459 PA2G4Q9UQ80 394 aaKnown RBP30.66■■■□□ 2.5
CTSA-203ENST00000372459 A0A087WZG4 1122 aa30.66■■■□□ 2.5
CTSA-203ENST00000372459 STARD3NLO95772 234 aa30.66■■■□□ 2.5
CTSA-203ENST00000372459 DNAJC10Q8IXB1 793 aa30.66■■■□□ 2.5
CTSA-203ENST00000372459 TBC1D2Q9BYX2 928 aa30.66■■■□□ 2.5
CTSA-203ENST00000372459 CLASRPQ8N2M8 674 aaKnown RBP30.65■■■□□ 2.5
CTSA-203ENST00000372459 UBE3BQ7Z3V4 1068 aa30.65■■■□□ 2.5
CTSA-203ENST00000372459 SYTL4Q96C24 671 aaPredicted RBP30.64■■■□□ 2.5
CTSA-203ENST00000372459 G3BP1Q13283 466 aaKnown RBP eCLIP30.63■■■□□ 2.49
CTSA-203ENST00000372459 EPHA10Q5JZY3 1008 aa30.63■■■□□ 2.49
CTSA-203ENST00000372459 TRIM6-TRIM34B2RNG4 842 aa30.62■■■□□ 2.49
CTSA-203ENST00000372459 BARGINQ6ZT62 677 aa30.62■■■□□ 2.49
CTSA-203ENST00000372459 DOT1LQ8TEK3 1739 aa30.62■■■□□ 2.49
CTSA-203ENST00000372459 ZBTB3Q9H5J0 574 aa30.62■■■□□ 2.49
CTSA-203ENST00000372459 CWC25Q9NXE8 425 aaPredicted RBP30.62■■■□□ 2.49
CTSA-203ENST00000372459 CCDC9Q9Y3X0 531 aaKnown RBP30.62■■■□□ 2.49
CTSA-203ENST00000372459 USP42Q9H9J4 1324 aaKnown RBP30.61■■■□□ 2.49
CTSA-203ENST00000372459 PRIM1P49642 420 aaKnown RBP30.61■■■□□ 2.49
CTSA-203ENST00000372459 CASP7P55210 303 aa30.61■■■□□ 2.49
CTSA-203ENST00000372459 RABL6Q3YEC7 729 aaPredicted RBP30.61■■■□□ 2.49
CTSA-203ENST00000372459 RILPL2Q969X0 211 aa30.61■■■□□ 2.49
CTSA-203ENST00000372459 KAT6BQ8WYB5 2073 aa30.6■■■□□ 2.49
CTSA-203ENST00000372459 REC8O95072 547 aa30.6■■■□□ 2.49
CTSA-203ENST00000372459 TTC41PQ6P2S7 1318 aa30.59■■■□□ 2.49
CTSA-203ENST00000372459 H7C1W4 665 aa30.59■■■□□ 2.49
CTSA-203ENST00000372459 ERC2O15083 957 aa30.59■■■□□ 2.49
CTSA-203ENST00000372459 CCDC191Q8NCU4 936 aa30.59■■■□□ 2.49
CTSA-203ENST00000372459 PI4K2BQ8TCG2 481 aa30.59■■■□□ 2.49
CTSA-203ENST00000372459 JARID2Q92833 1246 aaPredicted RBP30.59■■■□□ 2.49
CTSA-203ENST00000372459 USP26Q9BXU7 913 aa30.59■■■□□ 2.49
CTSA-203ENST00000372459 JCADQ9P266 1359 aa30.58■■■□□ 2.49
CTSA-203ENST00000372459 KIF2CQ99661 725 aa30.57■■■□□ 2.48
CTSA-203ENST00000372459 KIF6Q6ZMV9 814 aa30.57■■■□□ 2.48
CTSA-203ENST00000372459 UNC5CLQ8IV45 518 aa30.57■■■□□ 2.48
CTSA-203ENST00000372459 HSCBQ8IWL3 235 aa30.57■■■□□ 2.48
CTSA-203ENST00000372459 ZNF330Q9Y3S2 320 aaPredicted RBP30.57■■■□□ 2.48
CTSA-203ENST00000372459 IFIT2P09913 472 aaKnown RBP30.56■■■□□ 2.48
CTSA-203ENST00000372459 SNX21Q969T3 373 aa30.56■■■□□ 2.48
CTSA-203ENST00000372459 GPATCH3Q96I76 525 aa30.56■■■□□ 2.48
CTSA-203ENST00000372459 SASH1O94885 1247 aa30.55■■■□□ 2.48
CTSA-203ENST00000372459 COPRSQ9NQ92 184 aa30.55■■■□□ 2.48
CTSA-203ENST00000372459 CYP19A1P11511 503 aaPredicted RBP30.55■■■□□ 2.48
CTSA-203ENST00000372459 SLC4A9Q96Q91 983 aa30.55■■■□□ 2.48
CTSA-203ENST00000372459 GLRX3O76003 335 aaKnown RBP30.54■■■□□ 2.48
CTSA-203ENST00000372459 MARCH10Q8NA82 808 aaPredicted RBP30.54■■■□□ 2.48
CTSA-203ENST00000372459 SIL1Q9H173 461 aa30.54■■■□□ 2.48
CTSA-203ENST00000372459 TJP1Q07157 1748 aa30.54■■■□□ 2.48
CTSA-203ENST00000372459 CHMLP26374 656 aa30.54■■■□□ 2.48
CTSA-203ENST00000372459 RFX5P48382 616 aaPredicted RBP30.54■■■□□ 2.48
CTSA-203ENST00000372459 TCIRG1Q13488 830 aa30.54■■■□□ 2.48
CTSA-203ENST00000372459 AACSQ86V21 672 aa30.53■■■□□ 2.48
CTSA-203ENST00000372459 ESYT1Q9BSJ8 1104 aa30.53■■■□□ 2.48
CTSA-203ENST00000372459 ISCA1Q9BUE6 129 aa30.53■■■□□ 2.48
CTSA-203ENST00000372459 KLHDC4Q8TBB5 520 aa30.52■■■□□ 2.48
CTSA-203ENST00000372459 ECHDC1Q9NTX5 307 aa30.52■■■□□ 2.48
CTSA-203ENST00000372459 CNTROBQ8N137 903 aa30.52■■■□□ 2.48
CTSA-203ENST00000372459 PTPN12Q05209 780 aaKnown RBP30.51■■■□□ 2.47
CTSA-203ENST00000372459 C8orf37Q96NL8 207 aa30.51■■■□□ 2.47
CTSA-203ENST00000372459 AK9Q5TCS8 1911 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms