RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 ABCC4O15439 1325 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 ADAMTS2O95450 1211 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
KDM4A-201ENST00000372396 GTF2A1P52655 376 aaPredicted RBP11.96□□□□□ -0.49
KDM4A-201ENST00000372396 CCDC57Q2TAC2 916 aa11.96□□□□□ -0.49
KDM4A-201ENST00000372396 CEP85Q6P2H3 762 aa11.96□□□□□ -0.49
KDM4A-201ENST00000372396 SIL1Q9H173 461 aa11.96□□□□□ -0.49
KDM4A-201ENST00000372396 PTPRUQ92729 1446 aa11.96□□□□□ -0.49
KDM4A-201ENST00000372396 RIMS1Q86UR5 1692 aaKnown RBP11.96□□□□□ -0.49
KDM4A-201ENST00000372396 SLIT1O75093 1534 aa11.96□□□□□ -0.49
KDM4A-201ENST00000372396 C8orf34Q49A92 452 aa11.96□□□□□ -0.5
KDM4A-201ENST00000372396 PPP1R42Q7Z4L9 355 aa11.96□□□□□ -0.5
KDM4A-201ENST00000372396 ATP6V1DQ9Y5K8 247 aa11.96□□□□□ -0.5
KDM4A-201ENST00000372396 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.5
KDM4A-201ENST00000372396 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.5
KDM4A-201ENST00000372396 PSMA5P28066 241 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 TTC22Q5TAA0 569 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 LINS1Q8NG48 757 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 PRIMPOLQ96LW4 560 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 ANXA1P04083 346 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
KDM4A-201ENST00000372396 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 OVOS2A0A0J9YW53 1432 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 OVOS2Q6IE36 1432 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 DDX21Q9NR30 783 aaKnown RBP eCLIP11.95□□□□□ -0.5
KDM4A-201ENST00000372396 LRRC7Q96NW7 1537 aa11.95□□□□□ -0.5
KDM4A-201ENST00000372396 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 NUTM1Q86Y26 1132 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.56e-7■■■□□ 18.5
KDM4A-201ENST00000372396 LMTK3Q96Q04 1460 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 ARHGAP23Q9P227 1491 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
KDM4A-201ENST00000372396 G2E3Q7L622 706 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 CEP126Q9P2H0 1117 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 A0A087WZG4 1122 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 ZNF790Q6PG37 636 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
KDM4A-201ENST00000372396 SLC52A2Q9HAB3 445 aa11.94□□□□□ -0.5
KDM4A-201ENST00000372396 CNNM1Q9NRU3 951 aa11.93□□□□□ -0.5
KDM4A-201ENST00000372396 HMGB2P26583 209 aaKnown RBP11.93□□□□□ -0.5
KDM4A-201ENST00000372396 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
KDM4A-201ENST00000372396 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
KDM4A-201ENST00000372396 NOL7Q9UMY1 257 aaKnown RBP11.93□□□□□ -0.5
KDM4A-201ENST00000372396 ZKSCAN5Q9Y2L8 839 aa11.93□□□□□ -0.5
KDM4A-201ENST00000372396 K7ELQ4 463 aaPredicted RBP11.93□□□□□ -0.5
KDM4A-201ENST00000372396 GRM8O00222 908 aa11.93□□□□□ -0.5
KDM4A-201ENST00000372396 NEK4P51957 841 aa11.93□□□□□ -0.5
KDM4A-201ENST00000372396 BANK1Q8NDB2 785 aa11.93□□□□□ -0.5
KDM4A-201ENST00000372396 TBC1D32Q96NH3 1257 aa11.93□□□□□ -0.5
KDM4A-201ENST00000372396 MYOM1P52179 1685 aa11.93□□□□□ -0.5
KDM4A-201ENST00000372396 CALRP27797 417 aaKnown RBP11.92□□□□□ -0.5
KDM4A-201ENST00000372396 GPATCH11Q8N954 259 aa11.92□□□□□ -0.5
KDM4A-201ENST00000372396 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
KDM4A-201ENST00000372396 TBC1D9Q6ZT07 1266 aa11.92□□□□□ -0.5
KDM4A-201ENST00000372396 CDCA7Q9BWT1 371 aaPredicted RBP11.92□□□□□ -0.5
KDM4A-201ENST00000372396 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
KDM4A-201ENST00000372396 IQSEC2Q5JU85 1478 aa11.92□□□□□ -0.5
KDM4A-201ENST00000372396 ITSN1Q15811 1721 aa11.92□□□□□ -0.5
KDM4A-201ENST00000372396 GNL2Q13823 731 aaKnown RBP11.92□□□□□ -0.5
KDM4A-201ENST00000372396 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
KDM4A-201ENST00000372396 RHPN1Q8TCX5 695 aa11.92□□□□□ -0.5
KDM4A-201ENST00000372396 USP19O94966 1318 aa11.91□□□□□ -0.5
KDM4A-201ENST00000372396 VPS37DQ86XT2 251 aa11.91□□□□□ -0.5
KDM4A-201ENST00000372396 PHAXQ9H814 394 aaKnown RBP11.91□□□□□ -0.5
KDM4A-201ENST00000372396 CD163L1Q9NR16 1453 aa11.91□□□□□ -0.5
KDM4A-201ENST00000372396 ZNF500O60304 480 aaPredicted RBP11.91□□□□□ -0.5
KDM4A-201ENST00000372396 GABPB1Q06547 395 aaPredicted RBP11.91□□□□□ -0.5
KDM4A-201ENST00000372396 NGLY1Q96IV0 654 aa11.91□□□□□ -0.5
KDM4A-201ENST00000372396 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
KDM4A-201ENST00000372396 TBC1D2BQ9UPU7 963 aa11.91□□□□□ -0.5
KDM4A-201ENST00000372396 ZNF652Q9Y2D9 606 aa11.91□□□□□ -0.5
KDM4A-201ENST00000372396 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
KDM4A-201ENST00000372396 MYRIPQ8NFW9 859 aa11.91□□□□□ -0.5
KDM4A-201ENST00000372396 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
KDM4A-201ENST00000372396 AKAP2Q9Y2D5 859 aa11.91□□□□□ -0.5
KDM4A-201ENST00000372396 WASHC4Q2M389 1173 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 FEZ1Q99689 392 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 ECHDC1Q9NTX5 307 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 MYO5BQ9ULV0 1848 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 ERBB3P21860 1342 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
KDM4A-201ENST00000372396 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.5
KDM4A-201ENST00000372396 PHKG2P15735 406 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 PDE1AP54750 535 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 TRDNQ13061 729 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 PPP1R9BQ96SB3 815 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 ZBTB3Q9H5J0 574 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 BTG4Q9NY30 223 aa11.9□□□□□ -0.5
KDM4A-201ENST00000372396 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
KDM4A-201ENST00000372396 UBE3BQ7Z3V4 1068 aa11.9□□□□□ -0.51
KDM4A-201ENST00000372396 FAM184AQ8NB25 1140 aa11.9□□□□□ -0.51
KDM4A-201ENST00000372396 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.89□□□□□ -0.51
KDM4A-201ENST00000372396 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
KDM4A-201ENST00000372396 TOMM22Q9NS69 142 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms