RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ANKRD45Q5TZF3 282 aa32.79■■■□□ 2.84
ATPAF1-202ENST00000371937 TTLL7Q6ZT98 887 aa32.79■■■□□ 2.84
ATPAF1-202ENST00000371937 UTYO14607 1347 aa32.79■■■□□ 2.84
ATPAF1-202ENST00000371937 PALLDQ8WX93 1383 aa32.79■■■□□ 2.84
ATPAF1-202ENST00000371937 ARFGEF2Q9Y6D5 1785 aa32.79■■■□□ 2.84
ATPAF1-202ENST00000371937 LOC102724428A0A0B4J2F2 783 aa32.79■■■□□ 2.84
ATPAF1-202ENST00000371937 SIK1P57059 783 aa32.79■■■□□ 2.84
ATPAF1-202ENST00000371937 SEPT12Q8IYM1 358 aa32.79■■■□□ 2.84
ATPAF1-202ENST00000371937 TJP1Q07157 1748 aa32.77■■■□□ 2.84
ATPAF1-202ENST00000371937 ATP6V1AP38606 617 aa32.77■■■□□ 2.84
ATPAF1-202ENST00000371937 GCKRQ14397 625 aa32.77■■■□□ 2.84
ATPAF1-202ENST00000371937 ZBTB47Q9UFB7 747 aaPredicted RBP32.75■■■□□ 2.83
ATPAF1-202ENST00000371937 LNPKQ9C0E8 428 aa32.74■■■□□ 2.83
ATPAF1-202ENST00000371937 KIF6Q6ZMV9 814 aa32.74■■■□□ 2.83
ATPAF1-202ENST00000371937 ZNF330Q9Y3S2 320 aaPredicted RBP32.74■■■□□ 2.83
ATPAF1-202ENST00000371937 CICQ96RK0 1608 aaPredicted RBP32.74■■■□□ 2.83
ATPAF1-202ENST00000371937 PNMA6EA0A0J9YXQ4 647 aa32.73■■■□□ 2.83
ATPAF1-202ENST00000371937 SSH3Q8TE77 659 aa32.72■■■□□ 2.83
ATPAF1-202ENST00000371937 NUP188Q5SRE5 1749 aa32.72■■■□□ 2.83
ATPAF1-202ENST00000371937 PDE4AP27815 886 aa32.72■■■□□ 2.83
ATPAF1-202ENST00000371937 IL6STP40189 918 aaPredicted RBP32.72■■■□□ 2.83
ATPAF1-202ENST00000371937 ZNF772Q68DY9 489 aaPredicted RBP32.72■■■□□ 2.83
ATPAF1-202ENST00000371937 ZBTB3Q9H5J0 574 aa32.72■■■□□ 2.83
ATPAF1-202ENST00000371937 NPM2Q86SE8 214 aaKnown RBP32.71■■■□□ 2.83
ATPAF1-202ENST00000371937 ZBTB1Q9Y2K1 713 aa32.71■■■□□ 2.83
ATPAF1-202ENST00000371937 NHSQ6T4R5 1651 aa32.71■■■□□ 2.83
ATPAF1-202ENST00000371937 MTX1Q13505 466 aa32.7■■■□□ 2.83
ATPAF1-202ENST00000371937 PPP1R42Q7Z4L9 355 aa32.7■■■□□ 2.83
ATPAF1-202ENST00000371937 ZNF831Q5JPB2 1677 aa32.69■■■□□ 2.82
ATPAF1-202ENST00000371937 ATP5J2-PTCD1G3V325 749 aa32.69■■■□□ 2.82
ATPAF1-202ENST00000371937 POLA2Q14181 598 aa32.69■■■□□ 2.82
ATPAF1-202ENST00000371937 CCDC87Q9NVE4 849 aa32.69■■■□□ 2.82
ATPAF1-202ENST00000371937 BACH2Q9BYV9 841 aa32.68■■■□□ 2.82
ATPAF1-202ENST00000371937 AFDNP55196 1824 aaKnown RBP32.68■■■□□ 2.82
ATPAF1-202ENST00000371937 SRGAP3O43295 1099 aa32.67■■■□□ 2.82
ATPAF1-202ENST00000371937 FAM161AQ3B820 660 aa32.67■■■□□ 2.82
ATPAF1-202ENST00000371937 FAM182BQ5T319 152 aa32.67■■■□□ 2.82
ATPAF1-202ENST00000371937 RBM19Q9Y4C8 960 aaKnown RBP32.67■■■□□ 2.82
ATPAF1-202ENST00000371937 ITPK1Q13572 414 aa32.67■■■□□ 2.82
ATPAF1-202ENST00000371937 MAP3K15Q6ZN16 1313 aa32.67■■■□□ 2.82
ATPAF1-202ENST00000371937 CRKLP46109 303 aaKnown RBP32.66■■■□□ 2.82
ATPAF1-202ENST00000371937 CCDC191Q8NCU4 936 aa32.66■■■□□ 2.82
ATPAF1-202ENST00000371937 CWC25Q9NXE8 425 aaPredicted RBP32.66■■■□□ 2.82
ATPAF1-202ENST00000371937 INTS5Q6P9B9 1019 aaKnown RBP32.65■■■□□ 2.82
ATPAF1-202ENST00000371937 SUCLG2Q96I99 432 aa32.65■■■□□ 2.82
ATPAF1-202ENST00000371937 A0A087WZG4 1122 aa32.65■■■□□ 2.82
ATPAF1-202ENST00000371937 TCIRG1Q13488 830 aa32.65■■■□□ 2.82
ATPAF1-202ENST00000371937 ARXQ96QS3 562 aa32.65■■■□□ 2.82
ATPAF1-202ENST00000371937 BTAF1O14981 1849 aa32.63■■■□□ 2.81
ATPAF1-202ENST00000371937 COL15A1P39059 1388 aa32.63■■■□□ 2.81
ATPAF1-202ENST00000371937 EIF5P55010 431 aaKnown RBP32.63■■■□□ 2.81
ATPAF1-202ENST00000371937 TRIM28Q13263 835 aaKnown RBP32.63■■■□□ 2.81
ATPAF1-202ENST00000371937 EXOC6BQ9Y2D4 811 aa32.63■■■□□ 2.81
ATPAF1-202ENST00000371937 RBM6P78332 1123 aaKnown RBP32.62■■■□□ 2.81
ATPAF1-202ENST00000371937 HSP90AB3PQ58FF7 597 aa32.62■■■□□ 2.81
ATPAF1-202ENST00000371937 GIGYF2Q6Y7W6 1299 aaKnown RBP32.62■■■□□ 2.81
ATPAF1-202ENST00000371937 PTF1AQ7RTS3 328 aa32.62■■■□□ 2.81
ATPAF1-202ENST00000371937 KAZALD1Q96I82 304 aa32.62■■■□□ 2.81
ATPAF1-202ENST00000371937 ISCA1Q9BUE6 129 aa32.62■■■□□ 2.81
ATPAF1-202ENST00000371937 ERVV-1B6SEH8 477 aa32.61■■■□□ 2.81
ATPAF1-202ENST00000371937 BICC1Q9H694 974 aaKnown RBP32.61■■■□□ 2.81
ATPAF1-202ENST00000371937 RREB1Q92766 1687 aa32.61■■■□□ 2.81
ATPAF1-202ENST00000371937 UBE3BQ7Z3V4 1068 aa32.61■■■□□ 2.81
ATPAF1-202ENST00000371937 H7C1W4 665 aa32.6■■■□□ 2.81
ATPAF1-202ENST00000371937 APBB1O00213 710 aa32.6■■■□□ 2.81
ATPAF1-202ENST00000371937 RAB11FIP3O75154 756 aa32.6■■■□□ 2.81
ATPAF1-202ENST00000371937 HSP90AB4PQ58FF6 505 aa32.6■■■□□ 2.81
ATPAF1-202ENST00000371937 KRT27Q7Z3Y8 459 aa32.6■■■□□ 2.81
ATPAF1-202ENST00000371937 DZIP3Q86Y13 1208 aaKnown RBP32.6■■■□□ 2.81
ATPAF1-202ENST00000371937 LRRCC1Q9C099 1032 aa32.6■■■□□ 2.81
ATPAF1-202ENST00000371937 SBF2Q86WG5 1849 aa32.59■■■□□ 2.81
ATPAF1-202ENST00000371937 SURF6O75683 361 aaKnown RBP32.58■■■□□ 2.81
ATPAF1-202ENST00000371937 C8orf34Q49A92 452 aa32.58■■■□□ 2.81
ATPAF1-202ENST00000371937 FAM196AQ6ZSG2 479 aa32.58■■■□□ 2.81
ATPAF1-202ENST00000371937 COL5A3P25940 1745 aaPredicted RBP32.58■■■□□ 2.81
ATPAF1-202ENST00000371937 BCL11BQ9C0K0 894 aaPredicted RBP32.58■■■□□ 2.81
ATPAF1-202ENST00000371937 CASP7P55210 303 aa32.57■■■□□ 2.8
ATPAF1-202ENST00000371937 NOP58Q9Y2X3 529 aaKnown RBP32.56■■■□□ 2.8
ATPAF1-202ENST00000371937 SMARCA5O60264 1052 aaPredicted RBP32.55■■■□□ 2.8
ATPAF1-202ENST00000371937 TBC1D2BQ9UPU7 963 aa32.55■■■□□ 2.8
ATPAF1-202ENST00000371937 LINC00116Q8NCU8 138 aa32.54■■■□□ 2.8
ATPAF1-202ENST00000371937 FBXO41Q8TF61 875 aa32.54■■■□□ 2.8
ATPAF1-202ENST00000371937 CNTNAP4Q9C0A0 1308 aa32.54■■■□□ 2.8
ATPAF1-202ENST00000371937 HLFQ16534 295 aa32.54■■■□□ 2.8
ATPAF1-202ENST00000371937 MYH14Q7Z406 1995 aaKnown RBP32.53■■■□□ 2.8
ATPAF1-202ENST00000371937 RABL6Q3YEC7 729 aaPredicted RBP32.53■■■□□ 2.8
ATPAF1-202ENST00000371937 PLEKHM2Q8IWE5 1019 aa32.53■■■□□ 2.8
ATPAF1-202ENST00000371937 JARID2Q92833 1246 aaPredicted RBP32.53■■■□□ 2.8
ATPAF1-202ENST00000371937 EPHA10Q5JZY3 1008 aa32.52■■■□□ 2.8
ATPAF1-202ENST00000371937 RC3H1Q5TC82 1133 aaKnown RBP32.51■■■□□ 2.8
ATPAF1-202ENST00000371937 CCNL1Q9UK58 526 aaPredicted RBP32.51■■■□□ 2.8
ATPAF1-202ENST00000371937 BRWD3Q6RI45 1802 aa32.51■■■□□ 2.8
ATPAF1-202ENST00000371937 BMP2KLQ5H9B9 411 aa32.51■■■□□ 2.79
ATPAF1-202ENST00000371937 C16orf71Q8IYS4 520 aaPredicted RBP32.51■■■□□ 2.79
ATPAF1-202ENST00000371937 KIF1BPQ96EK5 621 aa32.51■■■□□ 2.79
ATPAF1-202ENST00000371937 BCL11AQ9H165 835 aa32.49■■■□□ 2.79
ATPAF1-202ENST00000371937 PCCAP05165 728 aaPredicted RBP32.49■■■□□ 2.79
ATPAF1-202ENST00000371937 ERC1Q8IUD2 1116 aa32.49■■■□□ 2.79
ATPAF1-202ENST00000371937 LY75O60449 1722 aa32.48■■■□□ 2.79
ATPAF1-202ENST00000371937 OS9Q13438 667 aaPredicted RBP32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms