RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
RAE1-201ENST00000371242 ERC1Q8IUD2 1116 aa13.61□□□□□ -0.23
RAE1-201ENST00000371242 XAGE3Q8WTP9 111 aa13.61□□□□□ -0.23
RAE1-201ENST00000371242 SUCLG2Q96I99 432 aa13.61□□□□□ -0.23
RAE1-201ENST00000371242 UBR2Q8IWV8 1755 aa13.61□□□□□ -0.23
RAE1-201ENST00000371242 ARFGEF2Q9Y6D5 1785 aa13.61□□□□□ -0.23
RAE1-201ENST00000371242 TTC41PQ6P2S7 1318 aa13.61□□□□□ -0.23
RAE1-201ENST00000371242 AFDNP55196 1824 aaKnown RBP13.61□□□□□ -0.23
RAE1-201ENST00000371242 CLASRPQ8N2M8 674 aaKnown RBP13.61□□□□□ -0.23
RAE1-201ENST00000371242 METTL22Q9BUU2 404 aaPredicted RBP13.61□□□□□ -0.23
RAE1-201ENST00000371242 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
RAE1-201ENST00000371242 NEURL1BA8MQ27 555 aa13.6□□□□□ -0.23
RAE1-201ENST00000371242 OS9Q13438 667 aaPredicted RBP13.6□□□□□ -0.23
RAE1-201ENST00000371242 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
RAE1-201ENST00000371242 MCCP23508 829 aa13.6□□□□□ -0.23
RAE1-201ENST00000371242 ANAPC15P60006 121 aa13.6□□□□□ -0.23
RAE1-201ENST00000371242 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
RAE1-201ENST00000371242 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
RAE1-201ENST00000371242 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
RAE1-201ENST00000371242 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
RAE1-201ENST00000371242 GCKRQ14397 625 aa13.59□□□□□ -0.23
RAE1-201ENST00000371242 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
RAE1-201ENST00000371242 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
RAE1-201ENST00000371242 CARD10Q9BWT7 1032 aa13.59□□□□□ -0.23
RAE1-201ENST00000371242 PAPPAQ13219 1627 aa13.59□□□□□ -0.23
RAE1-201ENST00000371242 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
RAE1-201ENST00000371242 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
RAE1-201ENST00000371242 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
RAE1-201ENST00000371242 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
RAE1-201ENST00000371242 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
RAE1-201ENST00000371242 MYD88Q99836 296 aa13.58□□□□□ -0.24
RAE1-201ENST00000371242 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
RAE1-201ENST00000371242 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
RAE1-201ENST00000371242 ERBB4Q15303 1308 aa13.58□□□□□ -0.24
RAE1-201ENST00000371242 IL2RBP14784 551 aa13.58□□□□□ -0.24
RAE1-201ENST00000371242 GBP4Q96PP9 640 aa13.58□□□□□ -0.24
RAE1-201ENST00000371242 UBAP1LF5GYI3 381 aa13.57□□□□□ -0.24
RAE1-201ENST00000371242 GPATCH3Q96I76 525 aa13.57□□□□□ -0.24
RAE1-201ENST00000371242 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
RAE1-201ENST00000371242 COL15A1P39059 1388 aa13.57□□□□□ -0.24
RAE1-201ENST00000371242 MAP4K4O95819 1239 aaPredicted RBP13.56□□□□□ -0.24
RAE1-201ENST00000371242 G3BP1Q13283 466 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■□□□ 12.9
RAE1-201ENST00000371242 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
RAE1-201ENST00000371242 IL25Q9H293 177 aa13.56□□□□□ -0.24
RAE1-201ENST00000371242 SGSM2O43147 1006 aa13.56□□□□□ -0.24
RAE1-201ENST00000371242 SASH1O94885 1247 aa13.56□□□□□ -0.24
RAE1-201ENST00000371242 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
RAE1-201ENST00000371242 MCM2P49736 904 aa13.56□□□□□ -0.24
RAE1-201ENST00000371242 CLEC17AQ6ZS10 378 aa13.56□□□□□ -0.24
RAE1-201ENST00000371242 CWC22Q9HCG8 908 aaKnown RBP13.56□□□□□ -0.24
RAE1-201ENST00000371242 PALD1Q9ULE6 856 aa13.56□□□□□ -0.24
RAE1-201ENST00000371242 KCPQ6ZWJ8 1503 aa13.55□□□□□ -0.24
RAE1-201ENST00000371242 TRAK2O60296 914 aa13.55□□□□□ -0.24
RAE1-201ENST00000371242 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
RAE1-201ENST00000371242 NEK4P51957 841 aa13.55□□□□□ -0.24
RAE1-201ENST00000371242 PLBD2Q8NHP8 589 aa13.55□□□□□ -0.24
RAE1-201ENST00000371242 NUP188Q5SRE5 1749 aa13.55□□□□□ -0.24
RAE1-201ENST00000371242 HSPA4P34932 840 aa13.54□□□□□ -0.24
RAE1-201ENST00000371242 RAD50Q92878 1312 aa13.54□□□□□ -0.24
RAE1-201ENST00000371242 NUCB2P80303 420 aa13.54□□□□□ -0.24
RAE1-201ENST00000371242 AACSQ86V21 672 aa13.54□□□□□ -0.24
RAE1-201ENST00000371242 PTMSP20962 102 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 TOGARAM1Q9Y4F4 1720 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 NBPF26B4DH59 902 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 SSFA2P28290 1259 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 EVA1CP58658 441 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 RABL6Q3YEC7 729 aaPredicted RBP13.53□□□□□ -0.24
RAE1-201ENST00000371242 NBPF14Q5TI25 921 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 NBPF10Q6P3W6 841 aaKnown RBP13.53□□□□□ -0.24
RAE1-201ENST00000371242 NBPF15Q8N660 670 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 EAF2Q96CJ1 260 aaPredicted RBP13.53□□□□□ -0.24
RAE1-201ENST00000371242 COPRSQ9NQ92 184 aa13.53□□□□□ -0.24
RAE1-201ENST00000371242 TOM1O60784 492 aa13.52□□□□□ -0.24
RAE1-201ENST00000371242 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.24
RAE1-201ENST00000371242 EVI5LQ96CN4 794 aa13.52□□□□□ -0.25
RAE1-201ENST00000371242 LSG1Q9H089 658 aaKnown RBP13.52□□□□□ -0.25
RAE1-201ENST00000371242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.25
RAE1-201ENST00000371242 CASP7P55210 303 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
RAE1-201ENST00000371242 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
RAE1-201ENST00000371242 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 TMX3Q96JJ7 454 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 A0A087WZG4 1122 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 ATP5J2-PTCD1G3V325 749 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 PTCD1O75127 700 aaKnown RBP13.51□□□□□ -0.25
RAE1-201ENST00000371242 RFX5P48382 616 aaPredicted RBP13.51□□□□□ -0.25
RAE1-201ENST00000371242 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
RAE1-201ENST00000371242 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 SIL1Q9H173 461 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 DIAPH3Q9NSV4 1193 aa13.51□□□□□ -0.25
RAE1-201ENST00000371242 CUL4AQ13619 759 aa13.5□□□□□ -0.25
RAE1-201ENST00000371242 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
RAE1-201ENST00000371242 KLHDC4Q8TBB5 520 aa13.5□□□□□ -0.25
RAE1-201ENST00000371242 TJP1Q07157 1748 aa13.5□□□□□ -0.25
RAE1-201ENST00000371242 PTPN12Q05209 780 aaKnown RBP13.5□□□□□ -0.25
RAE1-201ENST00000371242 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms