RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 CCT4P50991 539 aaKnown RBP13.76□□□□□ -0.21
CTCFL-202ENST00000371196 NPHP1O15259 732 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 NEMFO60524 1076 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 CPA1P15085 419 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 CDC25BP30305 580 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-202ENST00000371196 HYPKQ9NX55 129 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 CHL1O00533 1208 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 SGSM2O43147 1006 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 ELP1O95163 1332 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 HECW2Q9P2P5 1572 aa13.76□□□□□ -0.21
CTCFL-202ENST00000371196 KIDINS220Q9ULH0 1771 aa13.75□□□□□ -0.21
CTCFL-202ENST00000371196 YTHDC2Q9H6S0 1430 aaKnown RBP13.75□□□□□ -0.21
CTCFL-202ENST00000371196 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
CTCFL-202ENST00000371196 CASTP20810 708 aaKnown RBP13.75□□□□□ -0.21
CTCFL-202ENST00000371196 PNMA6EA0A0J9YXQ4 647 aa13.75□□□□□ -0.21
CTCFL-202ENST00000371196 SKILP12757 684 aa13.75□□□□□ -0.21
CTCFL-202ENST00000371196 ARID5BQ14865 1188 aa13.75□□□□□ -0.21
CTCFL-202ENST00000371196 PRAM1Q96QH2 718 aa13.75□□□□□ -0.21
CTCFL-202ENST00000371196 DNAJC25Q9H1X3 360 aa13.75□□□□□ -0.21
CTCFL-202ENST00000371196 FEZ2Q9UHY8 353 aaPredicted RBP13.75□□□□□ -0.21
CTCFL-202ENST00000371196 ERBB3P21860 1342 aa13.74□□□□□ -0.21
CTCFL-202ENST00000371196 GTF3C6Q969F1 213 aa13.74□□□□□ -0.21
CTCFL-202ENST00000371196 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
CTCFL-202ENST00000371196 DDX19AQ9NUU7 478 aaKnown RBP13.74□□□□□ -0.21
CTCFL-202ENST00000371196 FRMPD1Q5SYB0 1578 aa13.74□□□□□ -0.21
CTCFL-202ENST00000371196 MAP4K4O95819 1239 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-202ENST00000371196 RBM43Q6ZSC3 357 aaKnown RBP13.74□□□□□ -0.21
CTCFL-202ENST00000371196 CDK19Q9BWU1 502 aa13.74□□□□□ -0.21
CTCFL-202ENST00000371196 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
CTCFL-202ENST00000371196 TRMT1Q9NXH9 659 aaKnown RBP13.74□□□□□ -0.21
CTCFL-202ENST00000371196 AOX1Q06278 1338 aa13.74□□□□□ -0.21
CTCFL-202ENST00000371196 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-202ENST00000371196 HTATSF1O43719 755 aaKnown RBP13.73□□□□□ -0.21
CTCFL-202ENST00000371196 H2AFXP16104 143 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-202ENST00000371196 ATP8B2P98198 1209 aa13.73□□□□□ -0.21
CTCFL-202ENST00000371196 LARP1BQ659C4 914 aaKnown RBP13.73□□□□□ -0.21
CTCFL-202ENST00000371196 FAM173BQ6P4H8 233 aa13.73□□□□□ -0.21
CTCFL-202ENST00000371196 G2E3Q7L622 706 aa13.73□□□□□ -0.21
CTCFL-202ENST00000371196 FERMT3Q86UX7 667 aa13.73□□□□□ -0.21
CTCFL-202ENST00000371196 ZSCAN31Q96LW9 406 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-202ENST00000371196 CLSTN2Q9H4D0 955 aa13.73□□□□□ -0.21
CTCFL-202ENST00000371196 FHOD1Q9Y613 1164 aa13.73□□□□□ -0.21
CTCFL-202ENST00000371196 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-202ENST00000371196 RAD51AP2Q09MP3 1159 aa13.73□□□□□ -0.21
CTCFL-202ENST00000371196 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-202ENST00000371196 ERCC6LQ2NKX8 1250 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 CCAR2Q8N163 923 aaKnown RBP13.72□□□□□ -0.21
CTCFL-202ENST00000371196 PDRG1Q9NUG6 133 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 GOLGA6L19H0YKK7 550 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-202ENST00000371196 IL1RAPL2Q9NP60 686 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 MCM10Q7L590 875 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 MRFAP1L1Q96HT8 127 aa13.72□□□□□ -0.21
CTCFL-202ENST00000371196 NPHP3Q7Z494 1330 aa13.71□□□□□ -0.21
CTCFL-202ENST00000371196 KIF2AO00139 706 aaPredicted RBP13.71□□□□□ -0.21
CTCFL-202ENST00000371196 CAVIN2O95810 425 aa13.71□□□□□ -0.21
CTCFL-202ENST00000371196 SARM1Q6SZW1 724 aa13.71□□□□□ -0.21
CTCFL-202ENST00000371196 CDC37L1Q7L3B6 337 aa13.71□□□□□ -0.21
CTCFL-202ENST00000371196 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
CTCFL-202ENST00000371196 CCDC69A6NI79 296 aa13.71□□□□□ -0.22
CTCFL-202ENST00000371196 GNAI3P08754 354 aa13.71□□□□□ -0.22
CTCFL-202ENST00000371196 CLCN6P51797 869 aa13.71□□□□□ -0.22
CTCFL-202ENST00000371196 ST3GAL1Q11201 340 aa13.71□□□□□ -0.22
CTCFL-202ENST00000371196 SPG7Q9UQ90 795 aa13.71□□□□□ -0.22
CTCFL-202ENST00000371196 PTPRMP28827 1452 aa13.71□□□□□ -0.22
CTCFL-202ENST00000371196 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.22
CTCFL-202ENST00000371196 NEXMIFQ5QGS0 1516 aa13.71□□□□□ -0.22
CTCFL-202ENST00000371196 NR1I2O75469 434 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 PNMA6AP0CW24 399 aaPredicted RBP13.7□□□□□ -0.22
CTCFL-202ENST00000371196 CCZ1BP86790 482 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 CCZ1P86791 482 aaPredicted RBP13.7□□□□□ -0.22
CTCFL-202ENST00000371196 ME3Q16798 604 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 TEX35Q5T0J7 233 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 NECAB1Q8N987 351 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 TFIP11Q9UBB9 837 aaKnown RBP13.7□□□□□ -0.22
CTCFL-202ENST00000371196 PLA2G4AP47712 749 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
CTCFL-202ENST00000371196 FILIP1Q7Z7B0 1213 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
CTCFL-202ENST00000371196 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
CTCFL-202ENST00000371196 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-202ENST00000371196 IQCB1Q15051 598 aa13.69□□□□□ -0.22
CTCFL-202ENST00000371196 ADCK5Q3MIX3 580 aa13.69□□□□□ -0.22
CTCFL-202ENST00000371196 L2HGDHQ9H9P8 463 aa13.69□□□□□ -0.22
CTCFL-202ENST00000371196 KIF13AQ9H1H9 1805 aa13.69□□□□□ -0.22
CTCFL-202ENST00000371196 KCND1Q9NSA2 647 aa13.69□□□□□ -0.22
CTCFL-202ENST00000371196 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
CTCFL-202ENST00000371196 PI4K2BQ8TCG2 481 aa13.69□□□□□ -0.22
CTCFL-202ENST00000371196 LEO1Q8WVC0 666 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-202ENST00000371196 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
CTCFL-202ENST00000371196 PDCP20941 246 aa13.68□□□□□ -0.22
CTCFL-202ENST00000371196 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-202ENST00000371196 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
CTCFL-202ENST00000371196 BICD2Q8TD16 824 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms