RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 AMOTL1Q8IY63 956 aa5.08□□□□□ -1.6
MCF2-203ENST00000370576 PLEKHF1Q96S99 279 aa5.08□□□□□ -1.6
MCF2-203ENST00000370576 BSDC1Q9NW68 430 aaPredicted RBP5.08□□□□□ -1.6
MCF2-203ENST00000370576 RASSF7Q02833 373 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 JAZF1Q86VZ6 243 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 KIAA1551Q9HCM1 1747 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 CASS4Q9NQ75 786 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 COMMD10Q9Y6G5 202 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 ARAP2Q8WZ64 1704 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 ENPP3O14638 875 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 EVC2Q86UK5 1308 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 TTC21AQ8NDW8 1320 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 CPDO75976 1380 aa5.07□□□□□ -1.6
MCF2-203ENST00000370576 CGNL1Q0VF96 1302 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 ARHGEF10O15013 1369 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 TGFB3P10600 412 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 CSPP1Q1MSJ5 1256 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 UCN2Q96RP3 112 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 BCL2L13Q9BXK5 485 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 MKRN1Q9UHC7 482 aaKnown RBP5.06□□□□□ -1.6
MCF2-203ENST00000370576 PTMAP06454 111 aaKnown RBP5.06□□□□□ -1.6
MCF2-203ENST00000370576 FECHP22830 423 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 GIGYF2Q6Y7W6 1299 aaKnown RBP5.06□□□□□ -1.6
MCF2-203ENST00000370576 NLRP13Q86W25 1043 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 GABBR1Q9UBS5 961 aa5.06□□□□□ -1.6
MCF2-203ENST00000370576 A6NJY4 79 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 MNX1P50219 401 aaPredicted RBP5.05□□□□□ -1.6
MCF2-203ENST00000370576 DDX46Q7L014 1031 aaKnown RBP5.05□□□□□ -1.6
MCF2-203ENST00000370576 IL17RAQ96F46 866 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 NHSQ6T4R5 1651 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 WASLO00401 505 aaPredicted RBP5.05□□□□□ -1.6
MCF2-203ENST00000370576 PPP2R1AP30153 589 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 PLCD3Q8N3E9 789 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 PCDH12Q9NPG4 1184 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 PXDNLA1KZ92 1463 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 ARFGEF2Q9Y6D5 1785 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 TAF1LQ8IZX4 1826 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 PSEN1P49768 467 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 HDGFP51858 240 aaKnown RBP5.05□□□□□ -1.6
MCF2-203ENST00000370576 CCDC85AQ96PX6 553 aaPredicted RBP5.05□□□□□ -1.6
MCF2-203ENST00000370576 ZMIZ1Q9ULJ6 1067 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 NUB1Q9Y5A7 615 aa5.05□□□□□ -1.6
MCF2-203ENST00000370576 PDE3BQ13370 1112 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 ILDR2Q71H61 639 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 NT5DC4Q86YG4 428 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 SNRNP27Q8WVK2 155 aaKnown RBP5.04□□□□□ -1.6
MCF2-203ENST00000370576 PPP1R12CQ9BZL4 782 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 CHMP4BQ9H444 224 aaKnown RBP5.04□□□□□ -1.6
MCF2-203ENST00000370576 SWAP70Q9UH65 585 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 IL16Q14005 1332 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 ZNF646O15015 1829 aaPredicted RBP5.04□□□□□ -1.6
MCF2-203ENST00000370576 TTC36A6NLP5 189 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 ZNF500O60304 480 aaPredicted RBP5.04□□□□□ -1.6
MCF2-203ENST00000370576 RTL5Q5HYW3 569 aaPredicted RBP5.04□□□□□ -1.6
MCF2-203ENST00000370576 THEMISQ8N1K5 641 aaPredicted RBP5.04□□□□□ -1.6
MCF2-203ENST00000370576 ALG2Q9H553 416 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 PRR12Q9ULL5 1215 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 DISP2A7MBM2 1401 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 HEG1Q9ULI3 1381 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 FAM193AP78312 1265 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 GIPC2Q8TF65 315 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 RELTQ969Z4 430 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 C8orf48Q96LL4 319 aa5.04□□□□□ -1.6
MCF2-203ENST00000370576 THRAP3Q9Y2W1 955 aaKnown RBP5.04□□□□□ -1.6
MCF2-203ENST00000370576 CSB-PGBD3P0DP91 1061 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 KCNA6P17658 529 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 HSD3B2P26439 372 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 AMPD3Q01432 767 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 UBE4AQ14139 1066 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 CERKQ8TCT0 537 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 TMA7Q9Y2S6 64 aaKnown RBP5.03□□□□□ -1.6
MCF2-203ENST00000370576 BCL9O00512 1426 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 TMEM94Q12767 1356 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 GGT6Q6P531 493 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 CALR3Q96L12 384 aaKnown RBP5.03□□□□□ -1.6
MCF2-203ENST00000370576 INO80BQ9C086 356 aaPredicted RBP5.03□□□□□ -1.6
MCF2-203ENST00000370576 CHST12Q9NRB3 414 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 TYW1Q9NV66 732 aaKnown RBP5.03□□□□□ -1.6
MCF2-203ENST00000370576 FBXO9Q9UK97 447 aaPredicted RBP5.03□□□□□ -1.6
MCF2-203ENST00000370576 CRB1P82279 1406 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 LRP5O75197 1615 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 TMEM238LA0A1B0GVL6 79 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 IGBP1P78318 339 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 BMS1Q14692 1282 aaKnown RBP5.03□□□□□ -1.6
MCF2-203ENST00000370576 MUC3BQ9H195 1237 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 NLRP2Q9NX02 1062 aa5.03□□□□□ -1.6
MCF2-203ENST00000370576 DDX56Q9NY93 547 aaKnown RBP5.03□□□□□ -1.6
MCF2-203ENST00000370576 ZBTB47Q9UFB7 747 aaPredicted RBP5.03□□□□□ -1.6
MCF2-203ENST00000370576 MARSP56192 900 aaKnown RBP5.02□□□□□ -1.61
MCF2-203ENST00000370576 GJD4Q96KN9 370 aaPredicted RBP5.02□□□□□ -1.61
MCF2-203ENST00000370576 PANK3Q9H999 370 aa5.02□□□□□ -1.61
MCF2-203ENST00000370576 SCN7AQ01118 1682 aa5.02□□□□□ -1.61
MCF2-203ENST00000370576 RFC5P40937 340 aa5.02□□□□□ -1.61
MCF2-203ENST00000370576 CBLBQ13191 982 aa5.02□□□□□ -1.61
MCF2-203ENST00000370576 AVENQ9NQS1 362 aaPredicted RBP5.02□□□□□ -1.61
MCF2-203ENST00000370576 GEMIN8Q9NWZ8 242 aaKnown RBP5.02□□□□□ -1.61
MCF2-203ENST00000370576 NBPF20Q3BBV1 942 aa5.02□□□□□ -1.61
MCF2-203ENST00000370576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.02□□□□□ -1.61
MCF2-203ENST00000370576 SCINQ9Y6U3 715 aa5.02□□□□□ -1.61
MCF2-203ENST00000370576 RGS12O14924 1447 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms