RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 FLIIQ13045 1269 aa20.08■□□□□ 0.8
DKC1-201ENST00000369550 CNTROBQ8N137 903 aa20.08■□□□□ 0.8
DKC1-201ENST00000369550 CBX8Q9HC52 389 aa20.08■□□□□ 0.8
DKC1-201ENST00000369550 PDRG1Q9NUG6 133 aa20.08■□□□□ 0.8
DKC1-201ENST00000369550 LIG1P18858 919 aa20.07■□□□□ 0.8
DKC1-201ENST00000369550 FERMT3Q86UX7 667 aa20.07■□□□□ 0.8
DKC1-201ENST00000369550 NECTIN2Q92692 538 aa20.07■□□□□ 0.8
DKC1-201ENST00000369550 TUBGCP6Q96RT7 1819 aa20.07■□□□□ 0.8
DKC1-201ENST00000369550 ADAMTS13Q76LX8 1427 aa20.07■□□□□ 0.8
DKC1-201ENST00000369550 TTC6Q86TZ1 520 aa20.07■□□□□ 0.8
DKC1-201ENST00000369550 JAKMIP1Q96N16 626 aaKnown RBP20.07■□□□□ 0.8
DKC1-201ENST00000369550 PLEKHG1Q9ULL1 1385 aa20.06■□□□□ 0.8
DKC1-201ENST00000369550 SOS1Q07889 1333 aaPredicted RBP20.06■□□□□ 0.8
DKC1-201ENST00000369550 SURF6O75683 361 aaKnown RBP20.06■□□□□ 0.8
DKC1-201ENST00000369550 ZNF75DP51815 510 aa20.06■□□□□ 0.8
DKC1-201ENST00000369550 KIF18AQ8NI77 898 aa20.06■□□□□ 0.8
DKC1-201ENST00000369550 DACT1Q9NYF0 836 aa20.06■□□□□ 0.8
DKC1-201ENST00000369550 SH2B1Q9NRF2 756 aaPredicted RBP20.06■□□□□ 0.8
DKC1-201ENST00000369550 CLIP2Q9UDT6 1046 aa20.06■□□□□ 0.8
DKC1-201ENST00000369550 SLFN14P0C7P3 912 aa20.05■□□□□ 0.8
DKC1-201ENST00000369550 UBTFL1P0CB47 393 aaPredicted RBP20.05■□□□□ 0.8
DKC1-201ENST00000369550 GTF2E1P29083 439 aaPredicted RBP20.05■□□□□ 0.8
DKC1-201ENST00000369550 LARP1BQ659C4 914 aaKnown RBP20.05■□□□□ 0.8
DKC1-201ENST00000369550 CEP135Q66GS9 1140 aa20.05■□□□□ 0.8
DKC1-201ENST00000369550 ZSCAN31Q96LW9 406 aaPredicted RBP20.05■□□□□ 0.8
DKC1-201ENST00000369550 MORC2Q9Y6X9 1032 aaPredicted RBP20.05■□□□□ 0.8
DKC1-201ENST00000369550 NCKAP5LQ9HCH0 1330 aa20.05■□□□□ 0.8
DKC1-201ENST00000369550 KRT222Q8N1A0 295 aa20.05■□□□□ 0.8
DKC1-201ENST00000369550 C3P01024 1663 aa20.05■□□□□ 0.8
DKC1-201ENST00000369550 CRB1P82279 1406 aa20.05■□□□□ 0.8
DKC1-201ENST00000369550 FAM173BQ6P4H8 233 aa20.04■□□□□ 0.8
DKC1-201ENST00000369550 PI4K2BQ8TCG2 481 aa20.04■□□□□ 0.8
DKC1-201ENST00000369550 CYP46A1Q9Y6A2 500 aa20.04■□□□□ 0.8
DKC1-201ENST00000369550 VPS53Q5VIR6 699 aa20.04■□□□□ 0.8
DKC1-201ENST00000369550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.04■□□□□ 0.8
DKC1-201ENST00000369550 NECAB1Q8N987 351 aa20.04■□□□□ 0.8
DKC1-201ENST00000369550 FOXO3O43524 673 aa20.03■□□□□ 0.8
DKC1-201ENST00000369550 PLA2G4DQ86XP0 818 aa20.03■□□□□ 0.8
DKC1-201ENST00000369550 CACTINQ8WUQ7 758 aaKnown RBP20.03■□□□□ 0.8
DKC1-201ENST00000369550 PRPF40BQ6NWY9 871 aaKnown RBP20.03■□□□□ 0.8
DKC1-201ENST00000369550 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
DKC1-201ENST00000369550 CCDC66A2RUB6 948 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 CEBPAP49715 358 aaPredicted RBP20.02■□□□□ 0.8
DKC1-201ENST00000369550 ZNF165P49910 485 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 ADCK5Q3MIX3 580 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 DDX54Q8TDD1 881 aaKnown RBP20.02■□□□□ 0.8
DKC1-201ENST00000369550 LTKP29376 864 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 TERF2Q15554 542 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 CCDC30Q5VVM6 783 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 CDC37L1Q7L3B6 337 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 RHPN1Q8TCX5 695 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 ROBO2Q9HCK4 1378 aa20.02■□□□□ 0.8
DKC1-201ENST00000369550 RAB11FIP3O75154 756 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 CDK11BP21127 795 aaKnown RBP20.01■□□□□ 0.79
DKC1-201ENST00000369550 ME3Q16798 604 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 TMEM51Q9NW97 253 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.01■□□□□ 0.79
DKC1-201ENST00000369550 V9GYY5 206 aaPredicted RBP20.01■□□□□ 0.79
DKC1-201ENST00000369550 ARHGEF10O15013 1369 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 FER1L4A9Z1Z3 1794 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 HSP90AB2PQ58FF8 381 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 ZNF397Q8NF99 534 aaPredicted RBP20.01■□□□□ 0.79
DKC1-201ENST00000369550 SPATA32Q96LK8 384 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 DNAJC25Q9H1X3 360 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 ELP1O95163 1332 aa20.01■□□□□ 0.79
DKC1-201ENST00000369550 ZBTB22O15209 634 aa20■□□□□ 0.79
DKC1-201ENST00000369550 PPP1R42Q7Z4L9 355 aa20■□□□□ 0.79
DKC1-201ENST00000369550 USP44Q9H0E7 712 aa20■□□□□ 0.79
DKC1-201ENST00000369550 DDX19AQ9NUU7 478 aaKnown RBP20■□□□□ 0.79
DKC1-201ENST00000369550 SLIT1O75093 1534 aa20■□□□□ 0.79
DKC1-201ENST00000369550 SOX12O15370 315 aa20■□□□□ 0.79
DKC1-201ENST00000369550 TDRD7Q8NHU6 1098 aaKnown RBP20■□□□□ 0.79
DKC1-201ENST00000369550 SSH3Q8TE77 659 aa20■□□□□ 0.79
DKC1-201ENST00000369550 SCAND2PQ9GZW5 306 aaPredicted RBP20■□□□□ 0.79
DKC1-201ENST00000369550 TFIP11Q9UBB9 837 aaKnown RBP20■□□□□ 0.79
DKC1-201ENST00000369550 CCDC144BQ3MJ40 725 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 KMT5BQ4FZB7 885 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 CCDC144CPQ8IYA2 1237 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 RUFY2Q8WXA3 655 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 ZNF215Q9UL58 517 aaPredicted RBP19.99■□□□□ 0.79
DKC1-201ENST00000369550 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 KCNJ4P48050 445 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 PTPN14Q15678 1187 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 EID1Q9Y6B2 187 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
DKC1-201ENST00000369550 ZKSCAN1P17029 563 aaPredicted RBP19.98■□□□□ 0.79
DKC1-201ENST00000369550 PDCP20941 246 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 PTH1RQ03431 593 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 ST3GAL1Q11201 340 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 MTHFSDQ2M296 383 aaKnown RBP19.98■□□□□ 0.79
DKC1-201ENST00000369550 BICD2Q8TD16 824 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 KIF1BPQ96EK5 621 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 ZSWIM6Q9HCJ5 1215 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 ARHGAP23Q9P227 1491 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 SRGAP3O43295 1099 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 CLSTN2Q9H4D0 955 aa19.98■□□□□ 0.79
DKC1-201ENST00000369550 CCDC171Q6TFL3 1326 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms