RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 PRAG1Q86YV5 1406 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 PI4KAP2A4QPH2 592 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 DZIP3Q86Y13 1208 aaKnown RBP11.54□□□□□ -0.56
SCAF11-202ENST00000369367 PI4KAP1Q8N8J0 262 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 FLAD1Q8NFF5 587 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 BOLA2Q9H3K6 86 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 RANBP6O60518 1105 aaKnown RBP11.54□□□□□ -0.56
SCAF11-202ENST00000369367 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 SCLT1Q96NL6 688 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 CLEC11AQ9Y240 323 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 PARP10Q53GL7 1025 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 CEP57L1Q8IYX8 460 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 SH2B1Q9NRF2 756 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-202ENST00000369367 MAPKBP1O60336 1514 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 BAG4O95429 457 aaKnown RBP11.53□□□□□ -0.56
SCAF11-202ENST00000369367 HMGN5P82970 282 aaKnown RBP11.53□□□□□ -0.56
SCAF11-202ENST00000369367 ACBD3Q9H3P7 528 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCAF11-202ENST00000369367 MATR3P43243 847 aaKnown RBP eCLIP11.53□□□□□ -0.563e-6■■□□□ 12.9
SCAF11-202ENST00000369367 SLC12A7Q9Y666 1083 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 KDM4AO75164 1064 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 MAP4K4O95819 1239 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-202ENST00000369367 TNNI2P48788 182 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 KSR2Q6VAB6 950 aa11.53□□□□□ -0.56
SCAF11-202ENST00000369367 IL15P40933 162 aaPredicted RBP11.52□□□□□ -0.56
SCAF11-202ENST00000369367 CCDC39Q9UFE4 941 aa11.52□□□□□ -0.57
SCAF11-202ENST00000369367 ARHGEF12Q9NZN5 1544 aa11.52□□□□□ -0.57
SCAF11-202ENST00000369367 TMEM87AQ8NBN3 555 aa11.52□□□□□ -0.57
SCAF11-202ENST00000369367 HOOK2Q96ED9 719 aa11.52□□□□□ -0.57
SCAF11-202ENST00000369367 STK3Q13188 491 aa11.52□□□□□ -0.57
SCAF11-202ENST00000369367 RBM17Q96I25 401 aaKnown RBP11.52□□□□□ -0.57
SCAF11-202ENST00000369367 MAST1Q9Y2H9 1570 aa11.52□□□□□ -0.57
SCAF11-202ENST00000369367 DISP1Q96F81 1524 aa11.52□□□□□ -0.57
SCAF11-202ENST00000369367 MAP3K5Q99683 1374 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 XAGE3Q8WTP9 111 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 TMEM2Q9UHN6 1383 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 ATP5J2-PTCD1G3V325 749 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 K7ELQ4 463 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-202ENST00000369367 CFAP43Q8NDM7 1665 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 TMTC2Q8N394 836 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 PDILTQ8N807 584 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 RUFY1Q96T51 708 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 PYM1Q9BRP8 204 aaKnown RBP11.51□□□□□ -0.57
SCAF11-202ENST00000369367 DISP3Q9P2K9 1392 aa11.51□□□□□ -0.57
SCAF11-202ENST00000369367 PDE6BP35913 854 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
SCAF11-202ENST00000369367 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 CCNL1Q9UK58 526 aaPredicted RBP11.5□□□□□ -0.57
SCAF11-202ENST00000369367 USP21Q9UK80 565 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 CBFA2T2O43439 604 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 GNAQP50148 359 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 HMG20BQ9P0W2 317 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 CCDC194A0A1B0GVG4 234 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 IFIT3O14879 490 aaKnown RBP11.5□□□□□ -0.57
SCAF11-202ENST00000369367 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 KAT14Q9H8E8 782 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
SCAF11-202ENST00000369367 TSPY2A6NKD2 308 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 LINS1Q8NG48 757 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 F6X3S4 739 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 FGFR1OPO95684 399 aaKnown RBP11.5□□□□□ -0.57
SCAF11-202ENST00000369367 CERS3Q8IU89 383 aa11.5□□□□□ -0.57
SCAF11-202ENST00000369367 GRM8O00222 908 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 FIBPO43427 364 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 CCDC192P0DO97 292 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
SCAF11-202ENST00000369367 STXBP4Q6ZWJ1 553 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 CCDC8Q9H0W5 538 aaPredicted RBP11.49□□□□□ -0.57
SCAF11-202ENST00000369367 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
SCAF11-202ENST00000369367 HSP90AA2PQ14568 343 aaPredicted RBP11.49□□□□□ -0.57
SCAF11-202ENST00000369367 MFSD6Q6ZSS7 791 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 TANGO6Q9C0B7 1094 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 CNNM2Q9H8M5 875 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 SBNO1A3KN83 1393 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 PPFIBP1Q86W92 1011 aa11.49□□□□□ -0.57
SCAF11-202ENST00000369367 ARGLU1Q9NWB6 273 aaPredicted RBP11.49□□□□□ -0.57
SCAF11-202ENST00000369367 GNPATO15228 680 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 ZNF772Q68DY9 489 aaPredicted RBP11.48□□□□□ -0.57
SCAF11-202ENST00000369367 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 CCDC150Q8NCX0 1101 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 KRT23Q9C075 422 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 GNAT2P19087 354 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 HOXC9P31274 260 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 GSE1Q14687 1217 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
SCAF11-202ENST00000369367 POLR3AO14802 1390 aaPredicted RBP11.48□□□□□ -0.57
SCAF11-202ENST00000369367 SSRP1Q08945 709 aaKnown RBP11.48□□□□□ -0.57
SCAF11-202ENST00000369367 MNS1Q8NEH6 495 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 SPATA32Q96LK8 384 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 TRIM5Q9C035 493 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 LRRC27Q9C0I9 530 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 CHPF2Q9P2E5 772 aa11.48□□□□□ -0.57
SCAF11-202ENST00000369367 HOXB7P09629 217 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 NFATC2IPQ8NCF5 419 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 RBM27Q9P2N5 1060 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms