RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 TSPY2A6NKD2 308 aa20.78■□□□□ 0.92
SNX27-203ENST00000368843 GOPCQ9HD26 462 aa20.78■□□□□ 0.92
SNX27-203ENST00000368843 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
SNX27-203ENST00000368843 PSMD1Q99460 953 aa20.78■□□□□ 0.92
SNX27-203ENST00000368843 TTF1Q15361 905 aaPredicted RBP20.78■□□□□ 0.92
SNX27-203ENST00000368843 VPS36Q86VN1 386 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 MACROD2A1Z1Q3 448 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 CCDC184Q52MB2 194 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 ANKRD24Q8TF21 1146 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 SNRKQ9NRH2 765 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 NBPF6Q5VWK0 638 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 NBPF5PQ86XG9 351 aaPredicted RBP20.77■□□□□ 0.92
SNX27-203ENST00000368843 NBPF4Q96M43 638 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 TMEM67Q5HYA8 995 aa20.77■□□□□ 0.92
SNX27-203ENST00000368843 SPTY2D1Q68D10 685 aaPredicted RBP20.77■□□□□ 0.92
SNX27-203ENST00000368843 TEX13AQ9BXU3 409 aaPredicted RBP20.77■□□□□ 0.92
SNX27-203ENST00000368843 CCDC66A2RUB6 948 aa20.77■□□□□ 0.91
SNX27-203ENST00000368843 PDE4BQ07343 736 aa20.76■□□□□ 0.91
SNX27-203ENST00000368843 CCDC91Q7Z6B0 441 aa20.76■□□□□ 0.91
SNX27-203ENST00000368843 PDIA4P13667 645 aaKnown RBP20.76■□□□□ 0.91
SNX27-203ENST00000368843 CALML4Q96GE6 196 aa20.76■□□□□ 0.91
SNX27-203ENST00000368843 CNNM3Q8NE01 707 aa20.75■□□□□ 0.91
SNX27-203ENST00000368843 CASQ1P31415 396 aa20.75■□□□□ 0.91
SNX27-203ENST00000368843 NUP88Q99567 741 aaPredicted RBP20.75■□□□□ 0.91
SNX27-203ENST00000368843 HAND2P61296 217 aa20.75■□□□□ 0.91
SNX27-203ENST00000368843 SYCP3Q8IZU3 236 aa20.75■□□□□ 0.91
SNX27-203ENST00000368843 PCF11O94913 1555 aaKnown RBP20.75■□□□□ 0.91
SNX27-203ENST00000368843 F8W031 263 aaPredicted RBP20.74■□□□□ 0.91
SNX27-203ENST00000368843 LDHCP07864 332 aa20.74■□□□□ 0.91
SNX27-203ENST00000368843 PRKCSHP14314 528 aaPredicted RBP20.74■□□□□ 0.91
SNX27-203ENST00000368843 RAB11FIP4Q86YS3 637 aa20.74■□□□□ 0.91
SNX27-203ENST00000368843 ANO10Q9NW15 660 aa20.74■□□□□ 0.91
SNX27-203ENST00000368843 KIF5BP33176 963 aa20.74■□□□□ 0.91
SNX27-203ENST00000368843 USP8P40818 1118 aa20.74■□□□□ 0.91
SNX27-203ENST00000368843 DYDC1Q8WWB3 177 aa20.74■□□□□ 0.91
SNX27-203ENST00000368843 CLEC11AQ9Y240 323 aa20.74■□□□□ 0.91
SNX27-203ENST00000368843 TDRD12Q587J7 1177 aaKnown RBP20.74■□□□□ 0.91
SNX27-203ENST00000368843 CCDC12Q8WUD4 166 aaPredicted RBP20.74■□□□□ 0.91
SNX27-203ENST00000368843 EVI5LQ96CN4 794 aa20.73■□□□□ 0.91
SNX27-203ENST00000368843 CTNNA2P26232 953 aa20.73■□□□□ 0.91
SNX27-203ENST00000368843 FLIIQ13045 1269 aa20.73■□□□□ 0.91
SNX27-203ENST00000368843 MPHOSPH6Q99547 160 aaKnown RBP20.73■□□□□ 0.91
SNX27-203ENST00000368843 SH2B1Q9NRF2 756 aaPredicted RBP20.73■□□□□ 0.91
SNX27-203ENST00000368843 BCCIPQ9P287 314 aaKnown RBP eCLIP20.73■□□□□ 0.91
SNX27-203ENST00000368843 PUF60Q9UHX1 559 aaKnown RBP20.73■□□□□ 0.91
SNX27-203ENST00000368843 MFSD6Q6ZSS7 791 aa20.73■□□□□ 0.91
SNX27-203ENST00000368843 NKTRP30414 1462 aaKnown RBP20.73■□□□□ 0.91
SNX27-203ENST00000368843 UBE3BQ7Z3V4 1068 aa20.73■□□□□ 0.91
SNX27-203ENST00000368843 GSTTP1A0A1W2PQM5 241 aa20.73■□□□□ 0.91
SNX27-203ENST00000368843 RARSP54136 660 aaKnown RBP20.73■□□□□ 0.91
SNX27-203ENST00000368843 PTPRCP08575 1304 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 ATP6V1AP38606 617 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 CCDC152Q4G0S7 254 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 BICD1Q96G01 975 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 TCERG1LQ5VWI1 586 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 CPLX3Q8WVH0 158 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 VTI1AQ96AJ9 217 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 ADGRF5Q8IZF2 1346 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 ABCC11Q96J66 1382 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 ZBTB9Q96C00 473 aa20.72■□□□□ 0.91
SNX27-203ENST00000368843 TOP1P11387 765 aaKnown RBP20.72■□□□□ 0.91
SNX27-203ENST00000368843 MMRN2Q9H8L6 949 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 CIZ1Q9ULV3 898 aaPredicted RBP20.71■□□□□ 0.91
SNX27-203ENST00000368843 GSTO1P78417 241 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 KIF20AO95235 890 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 MTIF2P46199 727 aaKnown RBP20.71■□□□□ 0.91
SNX27-203ENST00000368843 C8orf37Q96NL8 207 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 COMMD10Q9Y6G5 202 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 KIAA0586Q9BVV6 1533 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 MSH6P52701 1360 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 ZFP91Q96JP5 570 aaPredicted RBP20.71■□□□□ 0.91
SNX27-203ENST00000368843 TCP11L1Q9NUJ3 509 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 KIF5CO60282 957 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 WWC3Q9ULE0 1092 aa20.71■□□□□ 0.91
SNX27-203ENST00000368843 SETDB2Q96T68 719 aa20.7■□□□□ 0.9
SNX27-203ENST00000368843 CRNKL1Q9BZJ0 848 aaKnown RBP20.7■□□□□ 0.9
SNX27-203ENST00000368843 NOS1P29475 1434 aa20.7■□□□□ 0.9
SNX27-203ENST00000368843 MAP2K1Q02750 393 aaPredicted RBP20.7■□□□□ 0.9
SNX27-203ENST00000368843 CCDC40Q4G0X9 1142 aa20.7■□□□□ 0.9
SNX27-203ENST00000368843 CCDC183Q5T5S1 534 aa20.7■□□□□ 0.9
SNX27-203ENST00000368843 ISM2Q6H9L7 571 aa20.7■□□□□ 0.9
SNX27-203ENST00000368843 MICU3Q86XE3 530 aa20.7■□□□□ 0.9
SNX27-203ENST00000368843 SFPQP23246 707 aaKnown RBP eCLIP20.7■□□□□ 0.9
SNX27-203ENST00000368843 LUZP1Q86V48 1076 aa20.7■□□□□ 0.9
SNX27-203ENST00000368843 SLC26A6Q9BXS9 759 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 GOLGA6L10A0A0M3HER8 536 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 ECM2O94769 699 aaPredicted RBP20.69■□□□□ 0.9
SNX27-203ENST00000368843 CETN1Q12798 172 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 AMPD3Q01432 767 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 CKAP2LQ8IYA6 745 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 UBAP1LF5GYI3 381 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 MCM4P33991 863 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 PLB1Q6P1J6 1458 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 IDEP14735 1019 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNX27-203ENST00000368843 IDI1Q13907 227 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 SCAND2PQ9GZW5 306 aaPredicted RBP20.69■□□□□ 0.9
SNX27-203ENST00000368843 USP16Q9Y5T5 823 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms