RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 ZSWIM6Q9HCJ5 1215 aa16.76■□□□□ 0.27
CCT3-206ENST00000368262 IL1RAPL2Q9NP60 686 aa16.76■□□□□ 0.27
CCT3-206ENST00000368262 BABAM1Q9NWV8 329 aa16.76■□□□□ 0.27
CCT3-206ENST00000368262 PODXL2Q9NZ53 605 aa16.76■□□□□ 0.27
CCT3-206ENST00000368262 CEP170BQ9Y4F5 1589 aaPredicted RBP16.76■□□□□ 0.27
CCT3-206ENST00000368262 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
CCT3-206ENST00000368262 FOXO3O43524 673 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 U2AF2P26368 475 aaKnown RBP eCLIP16.75■□□□□ 0.272e-7■■□□□ 13.4
CCT3-206ENST00000368262 TYRO3Q06418 890 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 SPC24Q8NBT2 197 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 KIF1BPQ96EK5 621 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 GABPB1Q06547 395 aaPredicted RBP16.75■□□□□ 0.27
CCT3-206ENST00000368262 PLA2G4DQ86XP0 818 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 NUP62CLQ9H1M0 184 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 TTC41PQ6P2S7 1318 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 IGSF1Q8N6C5 1336 aa16.75■□□□□ 0.27
CCT3-206ENST00000368262 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
CCT3-206ENST00000368262 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
CCT3-206ENST00000368262 TTC6Q86TZ1 520 aa16.74■□□□□ 0.27
CCT3-206ENST00000368262 TDRD7Q8NHU6 1098 aaKnown RBP16.74■□□□□ 0.27
CCT3-206ENST00000368262 PDRG1Q9NUG6 133 aa16.74■□□□□ 0.27
CCT3-206ENST00000368262 CTNNA3Q9UI47 895 aa16.74■□□□□ 0.27
CCT3-206ENST00000368262 SPDYE4A6NLX3 237 aa16.74■□□□□ 0.27
CCT3-206ENST00000368262 PLCB2Q00722 1185 aa16.74■□□□□ 0.27
CCT3-206ENST00000368262 FLT4P35916 1363 aa16.73■□□□□ 0.27
CCT3-206ENST00000368262 ZNF75DP51815 510 aa16.73■□□□□ 0.27
CCT3-206ENST00000368262 KRT85P78386 507 aa16.73■□□□□ 0.27
CCT3-206ENST00000368262 PPP1R42Q7Z4L9 355 aa16.73■□□□□ 0.27
CCT3-206ENST00000368262 TXNDC2Q86VQ3 553 aa16.73■□□□□ 0.27
CCT3-206ENST00000368262 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
CCT3-206ENST00000368262 PAXBP1Q9Y5B6 917 aa16.73■□□□□ 0.27
CCT3-206ENST00000368262 SURF6O75683 361 aaKnown RBP16.72■□□□□ 0.27
CCT3-206ENST00000368262 CDC25BP30305 580 aa16.72■□□□□ 0.27
CCT3-206ENST00000368262 TAF3Q5VWG9 929 aa16.72■□□□□ 0.27
CCT3-206ENST00000368262 CGNQ9P2M7 1197 aaKnown RBP16.72■□□□□ 0.27
CCT3-206ENST00000368262 MYH15Q9Y2K3 1946 aa16.72■□□□□ 0.27
CCT3-206ENST00000368262 MAP4K4O95819 1239 aaPredicted RBP16.72■□□□□ 0.27
CCT3-206ENST00000368262 CBX8Q9HC52 389 aa16.72■□□□□ 0.27
CCT3-206ENST00000368262 DDX19AQ9NUU7 478 aaKnown RBP16.72■□□□□ 0.27
CCT3-206ENST00000368262 CYP46A1Q9Y6A2 500 aa16.72■□□□□ 0.27
CCT3-206ENST00000368262 PTPRUQ92729 1446 aa16.71■□□□□ 0.27
CCT3-206ENST00000368262 GLRX3O76003 335 aaKnown RBP16.71■□□□□ 0.27
CCT3-206ENST00000368262 CPA1P15085 419 aa16.71■□□□□ 0.27
CCT3-206ENST00000368262 LIG1P18858 919 aa16.71■□□□□ 0.27
CCT3-206ENST00000368262 ZSCAN25Q6NSZ9 544 aa16.71■□□□□ 0.27
CCT3-206ENST00000368262 CCDC186Q7Z3E2 898 aa16.71■□□□□ 0.27
CCT3-206ENST00000368262 DDX41Q9UJV9 622 aaKnown RBP16.71■□□□□ 0.27
CCT3-206ENST00000368262 NWD1Q149M9 1564 aa16.71■□□□□ 0.27
CCT3-206ENST00000368262 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
CCT3-206ENST00000368262 ME3Q16798 604 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
CCT3-206ENST00000368262 LARP6Q9BRS8 491 aaKnown RBP16.7■□□□□ 0.26
CCT3-206ENST00000368262 CLSTN2Q9H4D0 955 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 ACEP12821 1306 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 PDCP20941 246 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 PTH1RQ03431 593 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 NECTIN1Q15223 517 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 ADCK5Q3MIX3 580 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 NPHP3Q7Z494 1330 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 LUZP1Q86V48 1076 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
CCT3-206ENST00000368262 SNRKQ9NRH2 765 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
CCT3-206ENST00000368262 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
CCT3-206ENST00000368262 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
CCT3-206ENST00000368262 VPS37CA5D8V6 355 aaPredicted RBP16.69■□□□□ 0.26
CCT3-206ENST00000368262 CAVIN2O95810 425 aa16.69■□□□□ 0.26
CCT3-206ENST00000368262 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
CCT3-206ENST00000368262 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
CCT3-206ENST00000368262 ANO6Q4KMQ2 910 aa16.69■□□□□ 0.26
CCT3-206ENST00000368262 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
CCT3-206ENST00000368262 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
CCT3-206ENST00000368262 TNNT1P13805 278 aa16.68■□□□□ 0.26
CCT3-206ENST00000368262 LRMPQ12912 555 aa16.68■□□□□ 0.26
CCT3-206ENST00000368262 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
CCT3-206ENST00000368262 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
CCT3-206ENST00000368262 CDC37L1Q7L3B6 337 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
CCT3-206ENST00000368262 PIK3C2AO00443 1686 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 GNAT3A8MTJ3 354 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
CCT3-206ENST00000368262 MTX1Q13505 466 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
CCT3-206ENST00000368262 SARM1Q6SZW1 724 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 EYA1Q99502 592 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 TPCN1Q9ULQ1 816 aa16.67■□□□□ 0.26
CCT3-206ENST00000368262 SRGAP3O43295 1099 aa16.66■□□□□ 0.26
CCT3-206ENST00000368262 NEMFO60524 1076 aa16.66■□□□□ 0.26
CCT3-206ENST00000368262 C16orf45Q96MC5 204 aaPredicted RBP16.66■□□□□ 0.26
CCT3-206ENST00000368262 DACT1Q9NYF0 836 aa16.66■□□□□ 0.26
CCT3-206ENST00000368262 FAM53CQ9NYF3 392 aa16.66■□□□□ 0.26
CCT3-206ENST00000368262 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
CCT3-206ENST00000368262 RBM6P78332 1123 aaKnown RBP16.65■□□□□ 0.26
CCT3-206ENST00000368262 JCADQ9P266 1359 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms