RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 LDHAL6AQ6ZMR3 332 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 CDC5LQ99459 802 aaKnown RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 TSPY26PQ9H489 355 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 SUDS3Q9H7L9 328 aaPredicted RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 CTNNA3Q9UI47 895 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 CASKIN1Q8WXD9 1431 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 IFIT3O14879 490 aaKnown RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 ISM2Q6H9L7 571 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 ZCRB1Q8TBF4 217 aaKnown RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 GOPCQ9HD26 462 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 CWC25Q9NXE8 425 aaPredicted RBP8.19□□□□□ -1.1
SPTA1-201ENST00000368147 ANKRD1Q15327 319 aa8.19□□□□□ -1.1
SPTA1-201ENST00000368147 PLEKHH2Q8IVE3 1493 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 SSRP1Q08945 709 aaKnown RBP8.18□□□□□ -1.1
SPTA1-201ENST00000368147 TSHZ3Q63HK5 1081 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 FAM83GA6ND36 823 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 FAM98CQ17RN3 349 aaKnown RBP8.18□□□□□ -1.1
SPTA1-201ENST00000368147 JDP2Q8WYK2 163 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 SIRT1Q96EB6 747 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 PRPF40BQ6NWY9 871 aaKnown RBP8.18□□□□□ -1.1
SPTA1-201ENST00000368147 TMEM57Q8N5G2 664 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 IQGAP2Q13576 1575 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 TSPY3P0CV98 308 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 TSPY8P0CW00 308 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 CCDC83Q8IWF9 413 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 KAT14Q9H8E8 782 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 RTCBQ9Y3I0 505 aaKnown RBP8.18□□□□□ -1.1
SPTA1-201ENST00000368147 SEPT14Q6ZU15 432 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 CHD1LQ86WJ1 897 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 JMYQ8N9B5 988 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 SAP30BPQ9UHR5 308 aaKnown RBP8.18□□□□□ -1.1
SPTA1-201ENST00000368147 TMPOP42166 694 aaKnown RBP8.18□□□□□ -1.1
SPTA1-201ENST00000368147 AMOTQ4VCS5 1084 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 MICALCLQ6ZW33 695 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 IQCA1Q86XH1 822 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 LRRC59Q96AG4 307 aaKnown RBP8.18□□□□□ -1.1
SPTA1-201ENST00000368147 SPATA32Q96LK8 384 aa8.18□□□□□ -1.1
SPTA1-201ENST00000368147 MPHOSPH6Q99547 160 aaKnown RBP8.18□□□□□ -1.1
SPTA1-201ENST00000368147 CATIPQ7Z7H3 387 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 BTG4Q9NY30 223 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 GNPATO15228 680 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 CCDC152Q4G0S7 254 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 GSE1Q14687 1217 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 UBE3BQ7Z3V4 1068 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 CTCFLQ8NI51 663 aaPredicted RBP8.17□□□□□ -1.1
SPTA1-201ENST00000368147 PKD2L1Q9P0L9 805 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 CCDC39Q9UFE4 941 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 CALM1P0DP23 149 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 CALM2P0DP24 149 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 CALM3P0DP25 149 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 BAG3O95817 575 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 CCDC113Q9H0I3 377 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
SPTA1-201ENST00000368147 STX8Q9UNK0 236 aa8.17□□□□□ -1.1
SPTA1-201ENST00000368147 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
SPTA1-201ENST00000368147 ZYXQ15942 572 aaKnown RBP8.16□□□□□ -1.1
SPTA1-201ENST00000368147 GCC1Q96CN9 775 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 HOMER2Q9NSB8 354 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 WASLO00401 505 aaPredicted RBP8.16□□□□□ -1.1
SPTA1-201ENST00000368147 APBA3O96018 575 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 CADPS2Q86UW7 1296 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 IFNL2Q8IZJ0 200 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 DACH1Q9UI36 760 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 BAG4O95429 457 aaKnown RBP8.16□□□□□ -1.1
SPTA1-201ENST00000368147 TAF12Q16514 161 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 CCDC178Q5BJE1 867 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 TSG101Q99816 390 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 PANK2Q9BZ23 570 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 PTPN23Q9H3S7 1636 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 PLB1Q6P1J6 1458 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 DAPK1P53355 1430 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 PDCP20941 246 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 SPOUT1Q5T280 376 aaKnown RBP8.16□□□□□ -1.1
SPTA1-201ENST00000368147 RGS22Q8NE09 1264 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 WASF1Q92558 559 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 CEP131Q9UPN4 1083 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 HYPKQ9NX55 129 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 U3KPZ7 1027 aaPredicted RBP8.16□□□□□ -1.1
SPTA1-201ENST00000368147 ACEP12821 1306 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 AKNAQ7Z591 1439 aa8.16□□□□□ -1.1
SPTA1-201ENST00000368147 POLA1P09884 1462 aaPredicted RBP8.15□□□□□ -1.1
SPTA1-201ENST00000368147 RAB3GAP1Q15042 981 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 TCERG1LQ5VWI1 586 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 STK32BQ9NY57 414 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 WDR7Q9Y4E6 1490 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 LETM1O95202 739 aaPredicted RBP8.15□□□□□ -1.1
SPTA1-201ENST00000368147 TMEM266Q2M3C6 531 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 TMEM67Q5HYA8 995 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 HEATR3Q7Z4Q2 680 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 FERMT3Q86UX7 667 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
SPTA1-201ENST00000368147 GOLGA8AA7E2F4 631 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 GOLGA8BA8MQT2 603 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 CTNNA2P26232 953 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 LRSAM1Q6UWE0 723 aa8.15□□□□□ -1.1
SPTA1-201ENST00000368147 PUS7Q96PZ0 661 aaKnown RBP8.15□□□□□ -1.1
SPTA1-201ENST00000368147 UIMC1Q96RL1 719 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms