RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TFCP2L1Q9NZI6 479 aa15.17■□□□□ 0.02
USF1-203ENST00000368021 ATP10DQ9P241 1426 aa15.16■□□□□ 0.02
USF1-203ENST00000368021 ANXA1P04083 346 aa15.16■□□□□ 0.02
USF1-203ENST00000368021 DEKP35659 375 aaKnown RBP15.16■□□□□ 0.02
USF1-203ENST00000368021 ITPK1Q13572 414 aa15.16■□□□□ 0.02
USF1-203ENST00000368021 TEX13AQ9BXU3 409 aaPredicted RBP15.16■□□□□ 0.02
USF1-203ENST00000368021 PI4KAP2A4QPH2 592 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 DDX58O95786 925 aaKnown RBP15.15■□□□□ 0.02
USF1-203ENST00000368021 LRP10Q7Z4F1 713 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 PI4KAP1Q8N8J0 262 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 DNAAF4Q8WXU2 420 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 ADCY9O60503 1353 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 GOLGB1Q14789 3259 aaKnown RBP15.15■□□□□ 0.02
USF1-203ENST00000368021 LY75O60449 1722 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 KSR2Q6VAB6 950 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 LINC00116Q8NCU8 138 aa15.15■□□□□ 0.02
USF1-203ENST00000368021 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
USF1-203ENST00000368021 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
USF1-203ENST00000368021 MEIS3Q99687 375 aa15.13■□□□□ 0.01
USF1-203ENST00000368021 GNAI3P08754 354 aa15.13■□□□□ 0.01
USF1-203ENST00000368021 BEND3Q5T5X7 828 aa15.13■□□□□ 0.01
USF1-203ENST00000368021 SRCIN1Q9C0H9 1055 aa15.13■□□□□ 0.01
USF1-203ENST00000368021 MSH5O43196 834 aa15.12■□□□□ 0.01
USF1-203ENST00000368021 MYL6BP14649 208 aa15.12■□□□□ 0.01
USF1-203ENST00000368021 AK7Q96M32 723 aa15.12■□□□□ 0.01
USF1-203ENST00000368021 MAP3K2Q9Y2U5 619 aa15.12■□□□□ 0.01
USF1-203ENST00000368021 PHF14O94880 888 aa15.11■□□□□ 0.01
USF1-203ENST00000368021 ZBTB7AO95365 584 aa15.11■□□□□ 0.01
USF1-203ENST00000368021 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
USF1-203ENST00000368021 RPAP2Q8IXW5 612 aaPredicted RBP15.11■□□□□ 0.01
USF1-203ENST00000368021 XAGE3Q8WTP9 111 aa15.11■□□□□ 0.01
USF1-203ENST00000368021 UTRNP46939 3433 aa15.11■□□□□ 0.01
USF1-203ENST00000368021 ALDH1L1O75891 902 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 STARD3NLO95772 234 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 COPS6Q7L5N1 327 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 DNAJC10Q8IXB1 793 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 SMC5Q8IY18 1101 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 C1orf115Q9H7X2 142 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 NBPF26B4DH59 902 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 GNPATO15228 680 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 AIMP1Q12904 312 aaKnown RBP15.1■□□□□ 0.01
USF1-203ENST00000368021 NBPF10Q6P3W6 841 aaKnown RBP15.1■□□□□ 0.01
USF1-203ENST00000368021 NBPF15Q8N660 670 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 ANKRD44Q8N8A2 993 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 USP44Q9H0E7 712 aa15.1■□□□□ 0.01
USF1-203ENST00000368021 CICQ96RK0 1608 aaPredicted RBP15.1■□□□□ 0.01
USF1-203ENST00000368021 PNPLA7Q6ZV29 1317 aa15.09■□□□□ 0.01
USF1-203ENST00000368021 GNAI2P04899 355 aa15.09■□□□□ 0.01
USF1-203ENST00000368021 ANKRD13DQ6ZTN6 518 aa15.09■□□□□ 0.01
USF1-203ENST00000368021 SIRT2Q8IXJ6 389 aa15.09■□□□□ 0.01
USF1-203ENST00000368021 LINS1Q8NG48 757 aa15.09■□□□□ 0.01
USF1-203ENST00000368021 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
USF1-203ENST00000368021 CEP85Q6P2H3 762 aa15.08■□□□□ 0.01
USF1-203ENST00000368021 RIC3Q7Z5B4 369 aa15.08■□□□□ 0.01
USF1-203ENST00000368021 GCC1Q96CN9 775 aa15.08■□□□□ 0.01
USF1-203ENST00000368021 A1BGP04217 495 aa15.08■□□□□ 0
USF1-203ENST00000368021 COL23A1Q86Y22 540 aaPredicted RBP15.08■□□□□ 0
USF1-203ENST00000368021 ZNF831Q5JPB2 1677 aa15.07■□□□□ 0
USF1-203ENST00000368021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.07■□□□□ 0
USF1-203ENST00000368021 UBTFL1P0CB47 393 aaPredicted RBP15.07■□□□□ 0
USF1-203ENST00000368021 CRKLP46109 303 aaKnown RBP15.07■□□□□ 0
USF1-203ENST00000368021 PIP4K2AP48426 406 aaPredicted RBP15.07■□□□□ 0
USF1-203ENST00000368021 NEXNQ0ZGT2 675 aa15.07■□□□□ 0
USF1-203ENST00000368021 PLBD2Q8NHP8 589 aa15.07■□□□□ 0
USF1-203ENST00000368021 METTL22Q9BUU2 404 aaPredicted RBP15.07■□□□□ 0
USF1-203ENST00000368021 TJP1Q07157 1748 aa15.07■□□□□ 0
USF1-203ENST00000368021 TAF1LQ8IZX4 1826 aa15.07■□□□□ 0
USF1-203ENST00000368021 C4BP0C0L5 1744 aa15.06■□□□□ 0
USF1-203ENST00000368021 HDAC5Q9UQL6 1122 aa15.06■□□□□ 0
USF1-203ENST00000368021 ARFGEF2Q9Y6D5 1785 aa15.06■□□□□ 0
USF1-203ENST00000368021 HMMRO75330 724 aa15.06■□□□□ 0
USF1-203ENST00000368021 CYP19A1P11511 503 aaPredicted RBP15.06■□□□□ 0
USF1-203ENST00000368021 HMGB2P26583 209 aaKnown RBP15.06■□□□□ 0
USF1-203ENST00000368021 PDZRN3Q9UPQ7 1066 aa15.05■□□□□ -0
USF1-203ENST00000368021 RTCBQ9Y3I0 505 aaKnown RBP15.05■□□□□ -0
USF1-203ENST00000368021 UTYO14607 1347 aa15.05■□□□□ -0
USF1-203ENST00000368021 MSL1Q68DK7 614 aa15.04■□□□□ -0
USF1-203ENST00000368021 INTS5Q6P9B9 1019 aaKnown RBP15.04■□□□□ -0
USF1-203ENST00000368021 DCTPP1Q9H773 170 aa15.04■□□□□ -0
USF1-203ENST00000368021 SPON1Q9HCB6 807 aa15.04■□□□□ -0
USF1-203ENST00000368021 NEURL1BA8MQ27 555 aa15.03■□□□□ -0
USF1-203ENST00000368021 IGKV5-2P06315 115 aa15.03■□□□□ -0
USF1-203ENST00000368021 NBPF7P0C2Y1 421 aaPredicted RBP15.03■□□□□ -0
USF1-203ENST00000368021 NUCB1Q02818 461 aa15.03■□□□□ -0
USF1-203ENST00000368021 CWF19L2Q2TBE0 894 aaKnown RBP15.03■□□□□ -0
USF1-203ENST00000368021 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
USF1-203ENST00000368021 LRRFIP2Q9Y608 721 aaKnown RBP15.03■□□□□ -0
USF1-203ENST00000368021 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
USF1-203ENST00000368021 TRAPPC3LQ5T215 181 aa15.03■□□□□ -0
USF1-203ENST00000368021 RC3H1Q5TC82 1133 aaKnown RBP15.03■□□□□ -0
USF1-203ENST00000368021 MTFR1LQ9H019 292 aa15.03■□□□□ -0
USF1-203ENST00000368021 CCDC87Q9NVE4 849 aa15.03■□□□□ -0
USF1-203ENST00000368021 C9orf78Q9NZ63 289 aaPredicted RBP15.03■□□□□ -0
USF1-203ENST00000368021 ZBTB1Q9Y2K1 713 aa15.03■□□□□ -0
USF1-203ENST00000368021 CNTNAP4Q9C0A0 1308 aa15.03■□□□□ -0
USF1-203ENST00000368021 MYH14Q7Z406 1995 aaKnown RBP15.02■□□□□ -0
USF1-203ENST00000368021 GRM8O00222 908 aa15.02■□□□□ -0
USF1-203ENST00000368021 SSFA2P28290 1259 aa15.02■□□□□ -0
USF1-203ENST00000368021 ATP8B2P98198 1209 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms