RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
H3F3A-202ENST00000366814 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
H3F3A-202ENST00000366814 RNMTO43148 476 aaKnown RBP13.57□□□□□ -0.24
H3F3A-202ENST00000366814 HMMRO75330 724 aa13.57□□□□□ -0.24
H3F3A-202ENST00000366814 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
H3F3A-202ENST00000366814 ANKRD45Q5TZF3 282 aa13.57□□□□□ -0.24
H3F3A-202ENST00000366814 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
H3F3A-202ENST00000366814 PPP1R1BQ9UD71 204 aaPredicted RBP13.57□□□□□ -0.24
H3F3A-202ENST00000366814 PXDNLA1KZ92 1463 aa13.56□□□□□ -0.24
H3F3A-202ENST00000366814 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
H3F3A-202ENST00000366814 ANKRD44Q8N8A2 993 aa13.56□□□□□ -0.24
H3F3A-202ENST00000366814 DCAF5Q96JK2 942 aa13.56□□□□□ -0.24
H3F3A-202ENST00000366814 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
H3F3A-202ENST00000366814 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
H3F3A-202ENST00000366814 TFCP2L1Q9NZI6 479 aa13.56□□□□□ -0.24
H3F3A-202ENST00000366814 PALLDQ8WX93 1383 aa13.56□□□□□ -0.24
H3F3A-202ENST00000366814 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
H3F3A-202ENST00000366814 G2E3Q7L622 706 aa13.55□□□□□ -0.24
H3F3A-202ENST00000366814 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
H3F3A-202ENST00000366814 ERVV-2B6SEH9 535 aa13.55□□□□□ -0.24
H3F3A-202ENST00000366814 GNAI3P08754 354 aa13.55□□□□□ -0.24
H3F3A-202ENST00000366814 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
H3F3A-202ENST00000366814 N4BP2Q86UW6 1770 aaPredicted RBP13.54□□□□□ -0.24
H3F3A-202ENST00000366814 PAPPAQ13219 1627 aa13.54□□□□□ -0.24
H3F3A-202ENST00000366814 CASZ1Q86V15 1759 aa13.54□□□□□ -0.24
H3F3A-202ENST00000366814 CABP4P57796 275 aa13.54□□□□□ -0.24
H3F3A-202ENST00000366814 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
H3F3A-202ENST00000366814 F6X3S4 739 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 SIRT2Q8IXJ6 389 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 MEIS3Q99687 375 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 DCTPP1Q9H773 170 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 ATP10DQ9P241 1426 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 GNAI2P04899 355 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 CEP85Q6P2H3 762 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 MTFR1LQ9H019 292 aa13.53□□□□□ -0.24
H3F3A-202ENST00000366814 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
H3F3A-202ENST00000366814 EIF5BO60841 1220 aaKnown RBP13.52□□□□□ -0.25
H3F3A-202ENST00000366814 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
H3F3A-202ENST00000366814 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
H3F3A-202ENST00000366814 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
H3F3A-202ENST00000366814 TAF1LQ8IZX4 1826 aa13.51□□□□□ -0.25
H3F3A-202ENST00000366814 SCN11AQ9UI33 1791 aa13.51□□□□□ -0.25
H3F3A-202ENST00000366814 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
H3F3A-202ENST00000366814 LOC102724428A0A0B4J2F2 783 aa13.5□□□□□ -0.25
H3F3A-202ENST00000366814 SIK1P57059 783 aa13.5□□□□□ -0.25
H3F3A-202ENST00000366814 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
H3F3A-202ENST00000366814 C5P01031 1676 aa13.5□□□□□ -0.25
H3F3A-202ENST00000366814 ATP6V1AP38606 617 aa13.5□□□□□ -0.25
H3F3A-202ENST00000366814 BECN1Q14457 450 aa13.5□□□□□ -0.25
H3F3A-202ENST00000366814 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
H3F3A-202ENST00000366814 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
H3F3A-202ENST00000366814 KDM6AO15550 1401 aaPredicted RBP13.49□□□□□ -0.25
H3F3A-202ENST00000366814 TUBGCP6Q96RT7 1819 aa13.49□□□□□ -0.25
H3F3A-202ENST00000366814 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
H3F3A-202ENST00000366814 AK7Q96M32 723 aa13.49□□□□□ -0.25
H3F3A-202ENST00000366814 QSER1Q2KHR3 1735 aa13.49□□□□□ -0.25
H3F3A-202ENST00000366814 PTGER2P43116 358 aa13.48□□□□□ -0.25
H3F3A-202ENST00000366814 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
H3F3A-202ENST00000366814 SEC24BO95487 1268 aa13.48□□□□□ -0.25
H3F3A-202ENST00000366814 SRCIN1Q9C0H9 1055 aa13.48□□□□□ -0.25
H3F3A-202ENST00000366814 KCNQ3O43525 872 aa13.47□□□□□ -0.25
H3F3A-202ENST00000366814 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
H3F3A-202ENST00000366814 COL23A1Q86Y22 540 aaPredicted RBP13.47□□□□□ -0.25
H3F3A-202ENST00000366814 FLAD1Q8NFF5 587 aa13.47□□□□□ -0.25
H3F3A-202ENST00000366814 TBC1D32Q96NH3 1257 aa13.47□□□□□ -0.25
H3F3A-202ENST00000366814 PHAXQ9H814 394 aaKnown RBP13.47□□□□□ -0.25
H3F3A-202ENST00000366814 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
H3F3A-202ENST00000366814 PTCD1O75127 700 aaKnown RBP13.46□□□□□ -0.25
H3F3A-202ENST00000366814 GIGYF1O75420 1035 aaPredicted RBP13.46□□□□□ -0.25
H3F3A-202ENST00000366814 LINC00116Q8NCU8 138 aa13.46□□□□□ -0.25
H3F3A-202ENST00000366814 DNAAF4Q8WXU2 420 aa13.46□□□□□ -0.25
H3F3A-202ENST00000366814 HEG1Q9ULI3 1381 aa13.46□□□□□ -0.25
H3F3A-202ENST00000366814 C4BP0C0L5 1744 aa13.46□□□□□ -0.25
H3F3A-202ENST00000366814 DDX58O95786 925 aaKnown RBP13.46□□□□□ -0.26
H3F3A-202ENST00000366814 POLD1P28340 1107 aa13.46□□□□□ -0.26
H3F3A-202ENST00000366814 MFAP1P55081 439 aaKnown RBP13.46□□□□□ -0.26
H3F3A-202ENST00000366814 ITPK1Q13572 414 aa13.46□□□□□ -0.26
H3F3A-202ENST00000366814 TTC5Q8N0Z6 440 aa13.46□□□□□ -0.26
H3F3A-202ENST00000366814 HYPKQ9NX55 129 aa13.46□□□□□ -0.26
H3F3A-202ENST00000366814 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.26
H3F3A-202ENST00000366814 PHF14O94880 888 aa13.45□□□□□ -0.26
H3F3A-202ENST00000366814 ZNF790Q6PG37 636 aa13.45□□□□□ -0.26
H3F3A-202ENST00000366814 ARXQ96QS3 562 aa13.45□□□□□ -0.26
H3F3A-202ENST00000366814 MRC1P22897 1456 aa13.45□□□□□ -0.26
H3F3A-202ENST00000366814 ATP8B2P98198 1209 aa13.44□□□□□ -0.26
H3F3A-202ENST00000366814 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
H3F3A-202ENST00000366814 C22orf23Q9BZE7 217 aa13.44□□□□□ -0.26
H3F3A-202ENST00000366814 SLC4A9Q96Q91 983 aa13.44□□□□□ -0.26
H3F3A-202ENST00000366814 PI4KAP2A4QPH2 592 aa13.43□□□□□ -0.26
H3F3A-202ENST00000366814 GNPATO15228 680 aa13.43□□□□□ -0.26
H3F3A-202ENST00000366814 CDC45O75419 566 aa13.43□□□□□ -0.26
H3F3A-202ENST00000366814 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
H3F3A-202ENST00000366814 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
H3F3A-202ENST00000366814 PI4KAP1Q8N8J0 262 aa13.43□□□□□ -0.26
H3F3A-202ENST00000366814 LRRFIP2Q9Y608 721 aaKnown RBP13.43□□□□□ -0.26
H3F3A-202ENST00000366814 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
H3F3A-202ENST00000366814 MSL1Q68DK7 614 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms