RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 RTN1Q16799 776 aa6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 TREML4Q6UXN2 200 aa6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 ABHD17AQ96GS6 310 aa6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 GMCL1Q96IK5 515 aa6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 SUSD3Q96L08 255 aa6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 CNTNAP3BQ96NU0 1288 aa6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 COL25A1Q9BXS0 654 aaPredicted RBP6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 CNTNAP3Q9BZ76 1288 aa6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 ZCCHC2Q9C0B9 1178 aaKnown RBP6.41□□□□□ -1.38
RNU4-1-201ENST00000363925 HIRAP54198 1017 aaPredicted RBP6.4□□□□□ -1.38
RNU4-1-201ENST00000363925 LBRQ14739 615 aaKnown RBP6.4□□□□□ -1.38
RNU4-1-201ENST00000363925 C16orf46Q6P387 395 aa6.4□□□□□ -1.38
RNU4-1-201ENST00000363925 CAPN12Q6ZSI9 719 aa6.4□□□□□ -1.38
RNU4-1-201ENST00000363925 NLRP8Q86W28 1048 aa6.4□□□□□ -1.38
RNU4-1-201ENST00000363925 GPR161Q8N6U8 529 aaKnown RBP6.4□□□□□ -1.38
RNU4-1-201ENST00000363925 ZNF280CQ8ND82 737 aa6.4□□□□□ -1.38
RNU4-1-201ENST00000363925 SEPT3Q9UH03 358 aa6.4□□□□□ -1.38
RNU4-1-201ENST00000363925 PDIA4P13667 645 aaKnown RBP6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 SSFA2P28290 1259 aa6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 GMPRP36959 345 aa6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 AAMPQ13685 434 aa6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 C11orf91Q3C1V1 193 aa6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 NANOS1Q8WY41 292 aaKnown RBP6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 SAP130Q9H0E3 1048 aa6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 QTRT2Q9H974 415 aaKnown RBP6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 PCDHGC4Q9Y5F7 938 aa6.39□□□□□ -1.39
RNU4-1-201ENST00000363925 MX2P20592 715 aa6.38□□□□□ -1.39
RNU4-1-201ENST00000363925 COX20Q5RI15 118 aa6.38□□□□□ -1.39
RNU4-1-201ENST00000363925 KLRG1Q96E93 195 aa6.38□□□□□ -1.39
RNU4-1-201ENST00000363925 IFT43Q96FT9 208 aa6.38□□□□□ -1.39
RNU4-1-201ENST00000363925 ANO2Q9NQ90 1003 aa6.38□□□□□ -1.39
RNU4-1-201ENST00000363925 NSFL1CQ9UNZ2 370 aaKnown RBP6.38□□□□□ -1.39
RNU4-1-201ENST00000363925 BNIP3LO60238 219 aa6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 MAPTP10636 758 aaKnown RBP6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 BMP4P12644 408 aa6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 CD33P20138 364 aa6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 FGFR3P22607 806 aa6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 BRD2P25440 801 aaKnown RBP6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 AEBP1Q8IUX7 1158 aa6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 BRD7Q9NPI1 651 aa6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 ATXN7L1Q9ULK2 861 aaPredicted RBP6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 PRR12Q9ULL5 1215 aa6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 GPC6Q9Y625 555 aaPredicted RBP6.37□□□□□ -1.39
RNU4-1-201ENST00000363925 THBS1P07996 1170 aa6.36□□□□□ -1.39
RNU4-1-201ENST00000363925 IDH3AP50213 366 aa6.36□□□□□ -1.39
RNU4-1-201ENST00000363925 ZNF211Q13398 564 aaPredicted RBP6.36□□□□□ -1.39
RNU4-1-201ENST00000363925 MTMR3Q13615 1198 aa6.36□□□□□ -1.39
RNU4-1-201ENST00000363925 BTLAQ7Z6A9 289 aa6.36□□□□□ -1.39
RNU4-1-201ENST00000363925 GTF3C2Q8WUA4 911 aaPredicted RBP6.36□□□□□ -1.39
RNU4-1-201ENST00000363925 LRFN2Q9ULH4 789 aa6.36□□□□□ -1.39
RNU4-1-201ENST00000363925 TGFBR3LH3BV60 316 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 MICAL2O94851 1124 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 VSIG8P0DPA2 414 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 EPB42P16452 691 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 ARID4AP29374 1257 aaPredicted RBP6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 POTEAQ6S8J7 498 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 TREML1Q86YW5 311 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 CCER1Q8TC90 406 aaPredicted RBP6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 COL26A1Q96A83 441 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 MYO19Q96H55 970 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 CFHR5Q9BXR6 569 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 MBIPQ9NS73 344 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 MARK1Q9P0L2 795 aa6.35□□□□□ -1.39
RNU4-1-201ENST00000363925 FAM157BP0CG42 384 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 SERPINB4P48594 390 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 ARSDP51689 593 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 CTBSQ01459 385 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 TNP2Q05952 138 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 TBC1D8BQ0IIM8 1120 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 SFSWAPQ12872 951 aaKnown RBP6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 RNFT1Q5M7Z0 435 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 RGL4Q8IZJ4 473 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 CMTR1Q8N1G2 835 aaKnown RBP6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 ABTB2Q8N961 1025 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 PNMA5Q96PV4 448 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 STIM2Q9P246 746 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 KCNH4Q9UQ05 1017 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 USP20Q9Y2K6 914 aa6.34□□□□□ -1.39
RNU4-1-201ENST00000363925 IGF1RP08069 1367 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 TYRO3Q06418 890 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 GAS6Q14393 721 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 SAMD5Q5TGI4 173 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 PHLDB3Q6NSJ2 640 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 KRT25Q7Z3Z0 450 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 RAB44Q7Z6P3 723 aaPredicted RBP6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 GLYCTKQ8IVS8 523 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 HOMEZQ8IX15 550 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 TTC16Q8NEE8 873 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 IGFLR1Q9H665 355 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 STRN4Q9NRL3 753 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 BCS1LQ9Y276 419 aa6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 DNMT3AQ9Y6K1 912 aaPredicted RBP6.33□□□□□ -1.4
RNU4-1-201ENST00000363925 H3BRB1 525 aa6.32□□□□□ -1.4
RNU4-1-201ENST00000363925 ADAMTS2O95450 1211 aa6.32□□□□□ -1.4
RNU4-1-201ENST00000363925 BRD1O95696 1058 aa6.32□□□□□ -1.4
RNU4-1-201ENST00000363925 MPSTP25325 297 aa6.32□□□□□ -1.4
RNU4-1-201ENST00000363925 NEUROD1Q13562 356 aa6.32□□□□□ -1.4
RNU4-1-201ENST00000363925 UBAP2LQ14157 1087 aaKnown RBP6.32□□□□□ -1.4
RNU4-1-201ENST00000363925 HELQQ8TDG4 1101 aa6.32□□□□□ -1.4
RNU4-1-201ENST00000363925 GPR152Q8TDT2 470 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms