RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 CNTLNQ9NXG0 1405 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 TMC6Q7Z403 805 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 TBC1D5Q92609 795 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 SCAPERQ9BY12 1400 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 ATP5DP30049 168 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 VCX3AQ9NNX9 186 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 INTS8Q75QN2 995 aaKnown RBP9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 TRMT1Q9NXH9 659 aaKnown RBP9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 MYH10P35580 1976 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 GOLGA1Q92805 767 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 A0A1B0GUL7 405 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 NUTM2FA1L443 756 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 CLNS1AP54105 237 aaKnown RBP9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 RAB3IPQ96QF0 476 aaPredicted RBP9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 SYNCQ9H7C4 482 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 CCDC196A0A1B0GTZ2 297 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 MTIF2P46199 727 aaKnown RBP9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 NCAPGQ9BPX3 1015 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 CPLX4Q7Z7G2 160 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 JAKMIP1Q96N16 626 aaKnown RBP9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 B4GALNT4Q76KP1 1039 aa9.63□□□□□ -0.87
NCKAP1-202ENST00000361354 CTAGE9A4FU28 777 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 POTEDQ86YR6 584 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 EHMT1Q9H9B1 1298 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 SH2B1Q9NRF2 756 aaPredicted RBP9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 L3MBTL2Q969R5 705 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 SEPT8Q92599 483 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 PRPF31Q8WWY3 499 aaKnown RBP9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 U3KPZ7 1027 aaPredicted RBP9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 NEDD9Q14511 834 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 CCT4P50991 539 aaKnown RBP9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 DDX27Q96GQ7 796 aaKnown RBP9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 SELENOSQ9BQE4 189 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 STRN4Q9NRL3 753 aa9.62□□□□□ -0.87
NCKAP1-202ENST00000361354 ARHGAP24Q8N264 748 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 ZC4H2Q9NQZ6 224 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 BRD4O60885 1362 aaPredicted RBP9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 MRVI1Q9Y6F6 885 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 CUX2O14529 1486 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 MIER3Q7Z3K6 550 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 PFDN4Q9NQP4 134 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 ARFGAP2Q8N6H7 521 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 POLA1P09884 1462 aaPredicted RBP9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 EFCAB2Q5VUJ9 269 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 TRPC3Q13507 836 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 GNG11P61952 73 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 CCDC62Q6P9F0 684 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 TXNDC16Q9P2K2 825 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 KRT13P13646 458 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 CEP85LQ5SZL2 805 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 FYB2Q5VWT5 728 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 CTAGE15A4D2H0 777 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 CTAGE8P0CG41 777 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 CTAGE4Q8IX94 777 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 FAM76AQ8TAV0 307 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 MPHOSPH8Q99549 860 aa9.61□□□□□ -0.87
NCKAP1-202ENST00000361354 AKAP2Q9Y2D5 859 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 AMPD3Q01432 767 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 SEC62Q99442 399 aaKnown RBP9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CCDC40Q4G0X9 1142 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CNNM3Q8NE01 707 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CARMIL1Q5VZK9 1371 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 RSPH3Q86UC2 560 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CUL5Q93034 780 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 TUBB4AP04350 444 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 A0A087WZG4 1122 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 TRIM35Q9UPQ4 493 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 PSME1Q06323 249 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 FMNL3Q8IVF7 1028 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 ANKRD24Q8TF21 1146 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CCDC38Q502W7 563 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CTCFLQ8NI51 663 aaPredicted RBP9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 USP37Q86T82 979 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 TMX1Q9H3N1 280 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 DDX19AQ9NUU7 478 aaKnown RBP9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 GAS2L2Q8NHY3 880 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 USP5P45974 858 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 GSTA5Q7RTV2 222 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 PPP1R12CQ9BZL4 782 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CTAGE1Q96RT6 745 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CCDC94Q9BW85 323 aaPredicted RBP9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 USP25Q9UHP3 1055 aa9.6□□□□□ -0.87
NCKAP1-202ENST00000361354 CALML4Q96GE6 196 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 C8orf76Q96K31 380 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 TACC3Q9Y6A5 838 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 DNAJC8O75937 253 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 SPAG5Q96R06 1193 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 PDE3AQ14432 1141 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 AFAP1L2Q8N4X5 818 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 MCUR1Q96AQ8 359 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.59□□□□□ -0.871e-6■■□□□ 12.4
NCKAP1-202ENST00000361354 SPTY2D1Q68D10 685 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 ERCC5P28715 1186 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 RBM5P52756 815 aaKnown RBP eCLIP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms