RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 NEXNQ0ZGT2 675 aa29.03■■■□□ 2.24
SDF4-202ENST00000360001 FBXO41Q8TF61 875 aa29.02■■■□□ 2.24
SDF4-202ENST00000360001 MYD88Q99836 296 aa29.02■■■□□ 2.24
SDF4-202ENST00000360001 LRRFIP2Q9Y608 721 aaKnown RBP29.02■■■□□ 2.24
SDF4-202ENST00000360001 ZNF831Q5JPB2 1677 aa29.02■■■□□ 2.24
SDF4-202ENST00000360001 ATP6V1AP38606 617 aa29.02■■■□□ 2.24
SDF4-202ENST00000360001 GCC1Q96CN9 775 aa29.01■■■□□ 2.23
SDF4-202ENST00000360001 BRWD3Q6RI45 1802 aa29.01■■■□□ 2.23
SDF4-202ENST00000360001 NEURL1BA8MQ27 555 aa29.01■■■□□ 2.23
SDF4-202ENST00000360001 ZBTB1Q9Y2K1 713 aa29.01■■■□□ 2.23
SDF4-202ENST00000360001 ITPK1Q13572 414 aa29■■■□□ 2.23
SDF4-202ENST00000360001 C9orf78Q9NZ63 289 aaPredicted RBP28.99■■■□□ 2.23
SDF4-202ENST00000360001 UTYO14607 1347 aa28.99■■■□□ 2.23
SDF4-202ENST00000360001 RREB1Q92766 1687 aa28.98■■■□□ 2.23
SDF4-202ENST00000360001 RGS3P49796 1198 aa28.98■■■□□ 2.23
SDF4-202ENST00000360001 RBM6P78332 1123 aaKnown RBP28.98■■■□□ 2.23
SDF4-202ENST00000360001 DCTPP1Q9H773 170 aa28.98■■■□□ 2.23
SDF4-202ENST00000360001 AFDNP55196 1824 aaKnown RBP28.98■■■□□ 2.23
SDF4-202ENST00000360001 GRM8O00222 908 aa28.97■■■□□ 2.23
SDF4-202ENST00000360001 ZBTB3Q9H5J0 574 aa28.97■■■□□ 2.23
SDF4-202ENST00000360001 ZNF330Q9Y3S2 320 aaPredicted RBP28.97■■■□□ 2.23
SDF4-202ENST00000360001 COL5A3P25940 1745 aaPredicted RBP28.97■■■□□ 2.23
SDF4-202ENST00000360001 ATP8B2P98198 1209 aa28.97■■■□□ 2.23
SDF4-202ENST00000360001 GCKRQ14397 625 aa28.97■■■□□ 2.23
SDF4-202ENST00000360001 HMMRO75330 724 aa28.96■■■□□ 2.23
SDF4-202ENST00000360001 NUCB1Q02818 461 aa28.96■■■□□ 2.23
SDF4-202ENST00000360001 INTS5Q6P9B9 1019 aaKnown RBP28.96■■■□□ 2.23
SDF4-202ENST00000360001 IL6STP40189 918 aaPredicted RBP28.95■■■□□ 2.22
SDF4-202ENST00000360001 CRKLP46109 303 aaKnown RBP28.95■■■□□ 2.22
SDF4-202ENST00000360001 TSHZ2Q9NRE2 1034 aa28.95■■■□□ 2.22
SDF4-202ENST00000360001 CCDC87Q9NVE4 849 aa28.95■■■□□ 2.22
SDF4-202ENST00000360001 PNMA6EA0A0J9YXQ4 647 aa28.94■■■□□ 2.22
SDF4-202ENST00000360001 ATP5J2-PTCD1G3V325 749 aa28.94■■■□□ 2.22
SDF4-202ENST00000360001 KRT27Q7Z3Y8 459 aa28.94■■■□□ 2.22
SDF4-202ENST00000360001 MYH14Q7Z406 1995 aaKnown RBP28.94■■■□□ 2.22
SDF4-202ENST00000360001 KIF6Q6ZMV9 814 aa28.93■■■□□ 2.22
SDF4-202ENST00000360001 MAP3K15Q6ZN16 1313 aa28.91■■■□□ 2.22
SDF4-202ENST00000360001 CHD1LQ86WJ1 897 aa28.91■■■□□ 2.22
SDF4-202ENST00000360001 HDAC5Q9UQL6 1122 aa28.91■■■□□ 2.22
SDF4-202ENST00000360001 PDE4AP27815 886 aa28.9■■■□□ 2.22
SDF4-202ENST00000360001 EIF5P55010 431 aaKnown RBP28.9■■■□□ 2.22
SDF4-202ENST00000360001 ANKRD45Q5TZF3 282 aa28.9■■■□□ 2.22
SDF4-202ENST00000360001 FAM196AQ6ZSG2 479 aa28.9■■■□□ 2.22
SDF4-202ENST00000360001 KAZALD1Q96I82 304 aa28.9■■■□□ 2.22
SDF4-202ENST00000360001 SUCLG2Q96I99 432 aa28.9■■■□□ 2.22
SDF4-202ENST00000360001 BCL11BQ9C0K0 894 aaPredicted RBP28.9■■■□□ 2.22
SDF4-202ENST00000360001 LY75O60449 1722 aa28.89■■■□□ 2.22
SDF4-202ENST00000360001 PPP1R42Q7Z4L9 355 aa28.89■■■□□ 2.22
SDF4-202ENST00000360001 LINC00116Q8NCU8 138 aa28.89■■■□□ 2.22
SDF4-202ENST00000360001 SSH3Q8TE77 659 aa28.89■■■□□ 2.22
SDF4-202ENST00000360001 LNPKQ9C0E8 428 aa28.88■■■□□ 2.21
SDF4-202ENST00000360001 TCIRG1Q13488 830 aa28.88■■■□□ 2.21
SDF4-202ENST00000360001 MTX1Q13505 466 aa28.88■■■□□ 2.21
SDF4-202ENST00000360001 POLA2Q14181 598 aa28.88■■■□□ 2.21
SDF4-202ENST00000360001 KCNQ4P56696 695 aa28.87■■■□□ 2.21
SDF4-202ENST00000360001 ISCA1Q9BUE6 129 aa28.87■■■□□ 2.21
SDF4-202ENST00000360001 EP400Q96L91 3159 aa28.87■■■□□ 2.21
SDF4-202ENST00000360001 GIGYF2Q6Y7W6 1299 aaKnown RBP28.86■■■□□ 2.21
SDF4-202ENST00000360001 CCDC191Q8NCU4 936 aa28.86■■■□□ 2.21
SDF4-202ENST00000360001 ARXQ96QS3 562 aa28.86■■■□□ 2.21
SDF4-202ENST00000360001 CWC25Q9NXE8 425 aaPredicted RBP28.86■■■□□ 2.21
SDF4-202ENST00000360001 A0A087WZG4 1122 aa28.86■■■□□ 2.21
SDF4-202ENST00000360001 RGS17Q9UGC6 210 aaPredicted RBP28.86■■■□□ 2.21
SDF4-202ENST00000360001 SRGAP3O43295 1099 aa28.85■■■□□ 2.21
SDF4-202ENST00000360001 CASP7P55210 303 aa28.85■■■□□ 2.21
SDF4-202ENST00000360001 DZIP3Q86Y13 1208 aaKnown RBP28.85■■■□□ 2.21
SDF4-202ENST00000360001 RXRBP28702 533 aa28.84■■■□□ 2.21
SDF4-202ENST00000360001 HLFQ16534 295 aa28.84■■■□□ 2.21
SDF4-202ENST00000360001 NPM2Q86SE8 214 aaKnown RBP28.84■■■□□ 2.21
SDF4-202ENST00000360001 COL15A1P39059 1388 aa28.84■■■□□ 2.21
SDF4-202ENST00000360001 ERVV-1B6SEH8 477 aa28.84■■■□□ 2.21
SDF4-202ENST00000360001 TRIM28Q13263 835 aaKnown RBP28.84■■■□□ 2.21
SDF4-202ENST00000360001 UBE3BQ7Z3V4 1068 aa28.84■■■□□ 2.21
SDF4-202ENST00000360001 BICC1Q9H694 974 aaKnown RBP28.84■■■□□ 2.21
SDF4-202ENST00000360001 TBC1D2BQ9UPU7 963 aa28.84■■■□□ 2.21
SDF4-202ENST00000360001 H7C1W4 665 aa28.83■■■□□ 2.21
SDF4-202ENST00000360001 JARID2Q92833 1246 aaPredicted RBP28.83■■■□□ 2.21
SDF4-202ENST00000360001 CNTNAP4Q9C0A0 1308 aa28.83■■■□□ 2.21
SDF4-202ENST00000360001 NUP98P52948 1817 aa28.83■■■□□ 2.21
SDF4-202ENST00000360001 CCNL1Q9UK58 526 aaPredicted RBP28.82■■■□□ 2.2
SDF4-202ENST00000360001 EXOC6BQ9Y2D4 811 aa28.82■■■□□ 2.2
SDF4-202ENST00000360001 ANKRD36CQ5JPF3 1778 aa28.82■■■□□ 2.2
SDF4-202ENST00000360001 TAF1LQ8IZX4 1826 aa28.81■■■□□ 2.2
SDF4-202ENST00000360001 EPHA10Q5JZY3 1008 aa28.81■■■□□ 2.2
SDF4-202ENST00000360001 HSP90AB3PQ58FF7 597 aa28.8■■■□□ 2.2
SDF4-202ENST00000360001 APBB1O00213 710 aa28.79■■■□□ 2.2
SDF4-202ENST00000360001 RC3H1Q5TC82 1133 aaKnown RBP28.79■■■□□ 2.2
SDF4-202ENST00000360001 TRIM37O94972 964 aa28.78■■■□□ 2.2
SDF4-202ENST00000360001 SMARCA5O60264 1052 aaPredicted RBP28.77■■■□□ 2.2
SDF4-202ENST00000360001 POTEAQ6S8J7 498 aa28.77■■■□□ 2.2
SDF4-202ENST00000360001 CAMTA2O94983 1202 aa28.77■■■□□ 2.2
SDF4-202ENST00000360001 RABL6Q3YEC7 729 aaPredicted RBP28.76■■■□□ 2.19
SDF4-202ENST00000360001 ZBTB47Q9UFB7 747 aaPredicted RBP28.75■■■□□ 2.19
SDF4-202ENST00000360001 SURF6O75683 361 aaKnown RBP28.75■■■□□ 2.19
SDF4-202ENST00000360001 GPTP24298 496 aa28.75■■■□□ 2.19
SDF4-202ENST00000360001 NLRP10Q86W26 655 aa28.75■■■□□ 2.19
SDF4-202ENST00000360001 RTL5Q5HYW3 569 aaPredicted RBP28.74■■■□□ 2.19
SDF4-202ENST00000360001 BACH2Q9BYV9 841 aa28.74■■■□□ 2.19
SDF4-202ENST00000360001 NOP58Q9Y2X3 529 aaKnown RBP28.74■■■□□ 2.19
SDF4-202ENST00000360001 BCORQ6W2J9 1755 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms