RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 USP16Q9Y5T5 823 aa22.42■■□□□ 1.18
PDLIM7-203ENST00000359895 COL14A1Q05707 1796 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-203ENST00000359895 OS9Q13438 667 aaPredicted RBP22.4■■□□□ 1.18
PDLIM7-203ENST00000359895 ANKRD13DQ6ZTN6 518 aa22.4■■□□□ 1.18
PDLIM7-203ENST00000359895 LRP10Q7Z4F1 713 aa22.4■■□□□ 1.18
PDLIM7-203ENST00000359895 USP42Q9H9J4 1324 aaKnown RBP22.4■■□□□ 1.18
PDLIM7-203ENST00000359895 NEURL1BA8MQ27 555 aa22.39■■□□□ 1.18
PDLIM7-203ENST00000359895 TRIM6-TRIM34B2RNG4 842 aa22.39■■□□□ 1.18
PDLIM7-203ENST00000359895 K7ELQ4 463 aaPredicted RBP22.39■■□□□ 1.18
PDLIM7-203ENST00000359895 IGKV5-2P06315 115 aa22.39■■□□□ 1.18
PDLIM7-203ENST00000359895 SPRYD3Q8NCJ5 442 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 ESYT1Q9BSJ8 1104 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 STRN4Q9NRL3 753 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 CIZ1Q9ULV3 898 aaPredicted RBP22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 TTC41PQ6P2S7 1318 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 COL22A1Q8NFW1 1626 aaPredicted RBP22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 KCPQ6ZWJ8 1503 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 GCKRQ14397 625 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 TSHZ3Q63HK5 1081 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 NUTM1Q86Y26 1132 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 RILPL2Q969X0 211 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 SUCLG2Q96I99 432 aa22.38■■□□□ 1.17
PDLIM7-203ENST00000359895 EPB41L2O43491 1005 aaKnown RBP22.37■■□□□ 1.17
PDLIM7-203ENST00000359895 CHMLP26374 656 aa22.37■■□□□ 1.17
PDLIM7-203ENST00000359895 CLASRPQ8N2M8 674 aaKnown RBP22.37■■□□□ 1.17
PDLIM7-203ENST00000359895 MYD88Q99836 296 aa22.37■■□□□ 1.17
PDLIM7-203ENST00000359895 COL15A1P39059 1388 aa22.36■■□□□ 1.17
PDLIM7-203ENST00000359895 NUP188Q5SRE5 1749 aa22.36■■□□□ 1.17
PDLIM7-203ENST00000359895 TOGARAM1Q9Y4F4 1720 aa22.35■■□□□ 1.17
PDLIM7-203ENST00000359895 PLBD2Q8NHP8 589 aa22.35■■□□□ 1.17
PDLIM7-203ENST00000359895 PI4K2BQ8TCG2 481 aa22.35■■□□□ 1.17
PDLIM7-203ENST00000359895 BICC1Q9H694 974 aaKnown RBP22.35■■□□□ 1.17
PDLIM7-203ENST00000359895 TNS2Q63HR2 1409 aa22.35■■□□□ 1.17
PDLIM7-203ENST00000359895 MCCP23508 829 aa22.34■■□□□ 1.17
PDLIM7-203ENST00000359895 DDIT3P35638 169 aa22.34■■□□□ 1.17
PDLIM7-203ENST00000359895 GPATCH3Q96I76 525 aa22.34■■□□□ 1.17
PDLIM7-203ENST00000359895 KAZALD1Q96I82 304 aa22.34■■□□□ 1.17
PDLIM7-203ENST00000359895 RBM42Q9BTD8 480 aaKnown RBP22.34■■□□□ 1.17
PDLIM7-203ENST00000359895 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
PDLIM7-203ENST00000359895 GLRX3O76003 335 aaKnown RBP22.33■■□□□ 1.16
PDLIM7-203ENST00000359895 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.16
PDLIM7-203ENST00000359895 G3BP1Q13283 466 aaKnown RBP eCLIP22.33■■□□□ 1.16
PDLIM7-203ENST00000359895 CNTROBQ8N137 903 aa22.33■■□□□ 1.16
PDLIM7-203ENST00000359895 DDX54Q8TDD1 881 aaKnown RBP22.33■■□□□ 1.16
PDLIM7-203ENST00000359895 ST18O60284 1047 aa22.32■■□□□ 1.16
PDLIM7-203ENST00000359895 ITGB4P16144 1822 aa22.31■■□□□ 1.16
PDLIM7-203ENST00000359895 CD2BP2O95400 341 aaKnown RBP22.31■■□□□ 1.16
PDLIM7-203ENST00000359895 IL27Q8NEV9 243 aa22.31■■□□□ 1.16
PDLIM7-203ENST00000359895 WNK3Q9BYP7 1800 aa22.31■■□□□ 1.16
PDLIM7-203ENST00000359895 IFIT2P09913 472 aaKnown RBP22.3■■□□□ 1.16
PDLIM7-203ENST00000359895 ANAPC15P60006 121 aa22.3■■□□□ 1.16
PDLIM7-203ENST00000359895 UNC5CLQ8IV45 518 aa22.3■■□□□ 1.16
PDLIM7-203ENST00000359895 JCADQ9P266 1359 aa22.3■■□□□ 1.16
PDLIM7-203ENST00000359895 GSE1Q14687 1217 aa22.29■■□□□ 1.16
PDLIM7-203ENST00000359895 ECHDC1Q9NTX5 307 aa22.29■■□□□ 1.16
PDLIM7-203ENST00000359895 PA2G4Q9UQ80 394 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-203ENST00000359895 BTG4Q9NY30 223 aa22.29■■□□□ 1.16
PDLIM7-203ENST00000359895 NBPF26B4DH59 902 aa22.28■■□□□ 1.16
PDLIM7-203ENST00000359895 NBPF14Q5TI25 921 aa22.28■■□□□ 1.16
PDLIM7-203ENST00000359895 NBPF10Q6P3W6 841 aaKnown RBP22.28■■□□□ 1.16
PDLIM7-203ENST00000359895 NBPF15Q8N660 670 aa22.28■■□□□ 1.16
PDLIM7-203ENST00000359895 TMOD3Q9NYL9 352 aa22.28■■□□□ 1.16
PDLIM7-203ENST00000359895 LRP6O75581 1613 aa22.28■■□□□ 1.16
PDLIM7-203ENST00000359895 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
PDLIM7-203ENST00000359895 IL17RAQ96F46 866 aa22.27■■□□□ 1.16
PDLIM7-203ENST00000359895 ANO2Q9NQ90 1003 aa22.27■■□□□ 1.16
PDLIM7-203ENST00000359895 DISP2A7MBM2 1401 aa22.27■■□□□ 1.15
PDLIM7-203ENST00000359895 RABL6Q3YEC7 729 aaPredicted RBP22.26■■□□□ 1.15
PDLIM7-203ENST00000359895 TEX13AQ9BXU3 409 aaPredicted RBP22.26■■□□□ 1.15
PDLIM7-203ENST00000359895 SASH1O94885 1247 aa22.25■■□□□ 1.15
PDLIM7-203ENST00000359895 MCM4P33991 863 aa22.25■■□□□ 1.15
PDLIM7-203ENST00000359895 AACSQ86V21 672 aa22.25■■□□□ 1.15
PDLIM7-203ENST00000359895 COPRSQ9NQ92 184 aa22.25■■□□□ 1.15
PDLIM7-203ENST00000359895 TJP1Q07157 1748 aa22.25■■□□□ 1.15
PDLIM7-203ENST00000359895 A0A087WZG4 1122 aa22.25■■□□□ 1.15
PDLIM7-203ENST00000359895 MCM2P49736 904 aa22.24■■□□□ 1.15
PDLIM7-203ENST00000359895 UBE3BQ7Z3V4 1068 aa22.24■■□□□ 1.15
PDLIM7-203ENST00000359895 VSIG10Q8N0Z9 540 aa22.24■■□□□ 1.15
PDLIM7-203ENST00000359895 RUFY2Q8WXA3 655 aa22.24■■□□□ 1.15
PDLIM7-203ENST00000359895 SGSM2O43147 1006 aa22.23■■□□□ 1.15
PDLIM7-203ENST00000359895 PTCD1O75127 700 aaKnown RBP22.23■■□□□ 1.15
PDLIM7-203ENST00000359895 EPHA10Q5JZY3 1008 aa22.23■■□□□ 1.15
PDLIM7-203ENST00000359895 ILDR2Q71H61 639 aa22.23■■□□□ 1.15
PDLIM7-203ENST00000359895 MAP4K4O95819 1239 aaPredicted RBP22.22■■□□□ 1.15
PDLIM7-203ENST00000359895 CASP7P55210 303 aa22.22■■□□□ 1.15
PDLIM7-203ENST00000359895 RAB3GAP1Q15042 981 aa22.22■■□□□ 1.15
PDLIM7-203ENST00000359895 EVI5LQ96CN4 794 aa22.22■■□□□ 1.15
PDLIM7-203ENST00000359895 CWC25Q9NXE8 425 aaPredicted RBP22.22■■□□□ 1.15
PDLIM7-203ENST00000359895 ATP5J2-PTCD1G3V325 749 aa22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 H7C1W4 665 aa22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 A1BGP04217 495 aa22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 DDX11L8A8MPP1 907 aa22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 RFX5P48382 616 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 TTLL7Q6ZT98 887 aa22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 CCDC191Q8NCU4 936 aa22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 EAF2Q96CJ1 260 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 CWC22Q9HCG8 908 aaKnown RBP22.21■■□□□ 1.15
PDLIM7-203ENST00000359895 HIP1O00291 1037 aa22.2■■□□□ 1.14
PDLIM7-203ENST00000359895 KIAA1211Q6ZU35 1233 aa22.2■■□□□ 1.14
PDLIM7-203ENST00000359895 GBP4Q96PP9 640 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms