RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 NBPF26B4DH59 902 aa17.25■□□□□ 0.35
CSNK1E-201ENST00000359867 NBPF14Q5TI25 921 aa17.25■□□□□ 0.35
CSNK1E-201ENST00000359867 NBPF10Q6P3W6 841 aaKnown RBP17.25■□□□□ 0.35
CSNK1E-201ENST00000359867 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CSNK1E-201ENST00000359867 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-201ENST00000359867 NBPF15Q8N660 670 aa17.25■□□□□ 0.35
CSNK1E-201ENST00000359867 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
CSNK1E-201ENST00000359867 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
CSNK1E-201ENST00000359867 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-201ENST00000359867 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
CSNK1E-201ENST00000359867 ZNF330Q9Y3S2 320 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-201ENST00000359867 F6X3S4 739 aa17.23■□□□□ 0.35
CSNK1E-201ENST00000359867 CYP19A1P11511 503 aaPredicted RBP17.23■□□□□ 0.35
CSNK1E-201ENST00000359867 AIMP1Q12904 312 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-201ENST00000359867 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
CSNK1E-201ENST00000359867 STARD3NLO95772 234 aa17.22■□□□□ 0.35
CSNK1E-201ENST00000359867 LRP10Q7Z4F1 713 aa17.22■□□□□ 0.35
CSNK1E-201ENST00000359867 TEX13AQ9BXU3 409 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-201ENST00000359867 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-201ENST00000359867 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
CSNK1E-201ENST00000359867 PXDNLA1KZ92 1463 aa17.21■□□□□ 0.35
CSNK1E-201ENST00000359867 LY75O60449 1722 aa17.21■□□□□ 0.35
CSNK1E-201ENST00000359867 SEC24BO95487 1268 aa17.21■□□□□ 0.35
CSNK1E-201ENST00000359867 LINC00116Q8NCU8 138 aa17.21■□□□□ 0.35
CSNK1E-201ENST00000359867 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
CSNK1E-201ENST00000359867 ATP10DQ9P241 1426 aa17.21■□□□□ 0.34
CSNK1E-201ENST00000359867 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
CSNK1E-201ENST00000359867 DCTPP1Q9H773 170 aa17.2■□□□□ 0.34
CSNK1E-201ENST00000359867 APBA3O96018 575 aa17.2■□□□□ 0.34
CSNK1E-201ENST00000359867 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
CSNK1E-201ENST00000359867 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
CSNK1E-201ENST00000359867 CRKLP46109 303 aaKnown RBP17.19■□□□□ 0.34
CSNK1E-201ENST00000359867 GLIPR1L2Q4G1C9 344 aa17.19■□□□□ 0.34
CSNK1E-201ENST00000359867 ANKRD45Q5TZF3 282 aa17.19■□□□□ 0.34
CSNK1E-201ENST00000359867 SLC4A10Q6U841 1118 aa17.19■□□□□ 0.34
CSNK1E-201ENST00000359867 MEIS3Q99687 375 aa17.19■□□□□ 0.34
CSNK1E-201ENST00000359867 CEP85Q6P2H3 762 aa17.19■□□□□ 0.34
CSNK1E-201ENST00000359867 LRRC4BQ9NT99 713 aa17.19■□□□□ 0.34
CSNK1E-201ENST00000359867 COL5A3P25940 1745 aaPredicted RBP17.19■□□□□ 0.34
CSNK1E-201ENST00000359867 PI4KAP2A4QPH2 592 aa17.18■□□□□ 0.34
CSNK1E-201ENST00000359867 PI4KAP1Q8N8J0 262 aa17.18■□□□□ 0.34
CSNK1E-201ENST00000359867 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
CSNK1E-201ENST00000359867 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
CSNK1E-201ENST00000359867 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
CSNK1E-201ENST00000359867 N4BP2Q86UW6 1770 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-201ENST00000359867 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-201ENST00000359867 GNAI3P08754 354 aa17.17■□□□□ 0.34
CSNK1E-201ENST00000359867 INTS5Q6P9B9 1019 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-201ENST00000359867 TTLL7Q6ZT98 887 aa17.17■□□□□ 0.34
CSNK1E-201ENST00000359867 SMIM5Q71RC9 77 aa17.17■□□□□ 0.34
CSNK1E-201ENST00000359867 ARXQ96QS3 562 aa17.17■□□□□ 0.34
CSNK1E-201ENST00000359867 CCDC87Q9NVE4 849 aa17.17■□□□□ 0.34
CSNK1E-201ENST00000359867 ADCY9O60503 1353 aa17.17■□□□□ 0.34
CSNK1E-201ENST00000359867 ZNF831Q5JPB2 1677 aa17.17■□□□□ 0.34
CSNK1E-201ENST00000359867 HMMRO75330 724 aa17.16■□□□□ 0.34
CSNK1E-201ENST00000359867 PROM2Q8N271 834 aa17.16■□□□□ 0.34
CSNK1E-201ENST00000359867 TAF1LQ8IZX4 1826 aa17.16■□□□□ 0.34
CSNK1E-201ENST00000359867 GNAI2P04899 355 aa17.16■□□□□ 0.34
CSNK1E-201ENST00000359867 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
CSNK1E-201ENST00000359867 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
CSNK1E-201ENST00000359867 TXNRD1Q16881 649 aa17.15■□□□□ 0.34
CSNK1E-201ENST00000359867 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
CSNK1E-201ENST00000359867 RIC3Q7Z5B4 369 aa17.14■□□□□ 0.33
CSNK1E-201ENST00000359867 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
CSNK1E-201ENST00000359867 SLKQ9H2G2 1235 aaPredicted RBP17.14■□□□□ 0.33
CSNK1E-201ENST00000359867 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
CSNK1E-201ENST00000359867 KSR2Q6VAB6 950 aa17.14■□□□□ 0.33
CSNK1E-201ENST00000359867 ANKRD13DQ6ZTN6 518 aa17.14■□□□□ 0.33
CSNK1E-201ENST00000359867 DDX58O95786 925 aaKnown RBP17.13■□□□□ 0.33
CSNK1E-201ENST00000359867 PLSCR1O15162 318 aa17.13■□□□□ 0.33
CSNK1E-201ENST00000359867 AMIGO3Q86WK7 504 aa17.13■□□□□ 0.33
CSNK1E-201ENST00000359867 RREB1Q92766 1687 aa17.13■□□□□ 0.33
CSNK1E-201ENST00000359867 IL6STP40189 918 aaPredicted RBP17.12■□□□□ 0.33
CSNK1E-201ENST00000359867 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
CSNK1E-201ENST00000359867 C4BP0C0L5 1744 aa17.12■□□□□ 0.33
CSNK1E-201ENST00000359867 GNPATO15228 680 aa17.12■□□□□ 0.33
CSNK1E-201ENST00000359867 EIF5P55010 431 aaKnown RBP17.12■□□□□ 0.33
CSNK1E-201ENST00000359867 CNTNAP4Q9C0A0 1308 aa17.12■□□□□ 0.33
CSNK1E-201ENST00000359867 ARFGEF2Q9Y6D5 1785 aa17.11■□□□□ 0.33
CSNK1E-201ENST00000359867 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
CSNK1E-201ENST00000359867 SLC27A3Q5K4L6 730 aa17.11■□□□□ 0.33
CSNK1E-201ENST00000359867 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
CSNK1E-201ENST00000359867 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
CSNK1E-201ENST00000359867 DEFB132Q7Z7B7 95 aa17.1■□□□□ 0.33
CSNK1E-201ENST00000359867 DZIP3Q86Y13 1208 aaKnown RBP17.1■□□□□ 0.33
CSNK1E-201ENST00000359867 PLBD2Q8NHP8 589 aa17.1■□□□□ 0.33
CSNK1E-201ENST00000359867 MYD88Q99836 296 aa17.1■□□□□ 0.33
CSNK1E-201ENST00000359867 USP44Q9H0E7 712 aa17.1■□□□□ 0.33
CSNK1E-201ENST00000359867 COL15A1P39059 1388 aa17.1■□□□□ 0.33
CSNK1E-201ENST00000359867 ATP8B2P98198 1209 aa17.09■□□□□ 0.33
CSNK1E-201ENST00000359867 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
CSNK1E-201ENST00000359867 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
CSNK1E-201ENST00000359867 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
CSNK1E-201ENST00000359867 FAM43AQ8N2R8 423 aa17.09■□□□□ 0.33
CSNK1E-201ENST00000359867 ATP5J2-PTCD1G3V325 749 aa17.09■□□□□ 0.33
CSNK1E-201ENST00000359867 KIF6Q6ZMV9 814 aa17.09■□□□□ 0.33
CSNK1E-201ENST00000359867 AK7Q96M32 723 aa17.09■□□□□ 0.33
CSNK1E-201ENST00000359867 PHF14O94880 888 aa17.08■□□□□ 0.33
CSNK1E-201ENST00000359867 HLFQ16534 295 aa17.08■□□□□ 0.33
CSNK1E-201ENST00000359867 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms