RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
GABPB1-202ENST00000359031 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
GABPB1-202ENST00000359031 UTYO14607 1347 aa18.29■□□□□ 0.52
GABPB1-202ENST00000359031 ERC2O15083 957 aa18.29■□□□□ 0.52
GABPB1-202ENST00000359031 FRAT2O75474 233 aaPredicted RBP18.29■□□□□ 0.52
GABPB1-202ENST00000359031 RABEP1Q15276 862 aa18.29■□□□□ 0.52
GABPB1-202ENST00000359031 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
GABPB1-202ENST00000359031 USP26Q9BXU7 913 aa18.29■□□□□ 0.52
GABPB1-202ENST00000359031 CHMP5Q9NZZ3 219 aa18.29■□□□□ 0.52
GABPB1-202ENST00000359031 ARFGEF2Q9Y6D5 1785 aa18.29■□□□□ 0.52
GABPB1-202ENST00000359031 SURF6O75683 361 aaKnown RBP18.28■□□□□ 0.52
GABPB1-202ENST00000359031 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
GABPB1-202ENST00000359031 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
GABPB1-202ENST00000359031 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
GABPB1-202ENST00000359031 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
GABPB1-202ENST00000359031 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
GABPB1-202ENST00000359031 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.52
GABPB1-202ENST00000359031 CABP4P57796 275 aa18.27■□□□□ 0.51
GABPB1-202ENST00000359031 LARP1Q6PKG0 1096 aaKnown RBP18.27■□□□□ 0.51
GABPB1-202ENST00000359031 TOM1L2Q6ZVM7 507 aa18.27■□□□□ 0.51
GABPB1-202ENST00000359031 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
GABPB1-202ENST00000359031 GRM8O00222 908 aa18.26■□□□□ 0.51
GABPB1-202ENST00000359031 VPS72Q15906 364 aa18.26■□□□□ 0.51
GABPB1-202ENST00000359031 KRT27Q7Z3Y8 459 aa18.26■□□□□ 0.51
GABPB1-202ENST00000359031 CARD10Q9BWT7 1032 aa18.26■□□□□ 0.51
GABPB1-202ENST00000359031 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
GABPB1-202ENST00000359031 ZCRB1Q8TBF4 217 aaKnown RBP18.25■□□□□ 0.51
GABPB1-202ENST00000359031 CIZ1Q9ULV3 898 aaPredicted RBP18.25■□□□□ 0.51
GABPB1-202ENST00000359031 ERBB4Q15303 1308 aa18.25■□□□□ 0.51
GABPB1-202ENST00000359031 BAG6P46379 1132 aa18.24■□□□□ 0.51
GABPB1-202ENST00000359031 NEXNQ0ZGT2 675 aa18.24■□□□□ 0.51
GABPB1-202ENST00000359031 CWF19L2Q2TBE0 894 aaKnown RBP18.24■□□□□ 0.51
GABPB1-202ENST00000359031 RIC3Q7Z5B4 369 aa18.24■□□□□ 0.51
GABPB1-202ENST00000359031 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
GABPB1-202ENST00000359031 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
GABPB1-202ENST00000359031 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
GABPB1-202ENST00000359031 LRP5O75197 1615 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 PSDA5PKW4 1024 aaPredicted RBP18.23■□□□□ 0.51
GABPB1-202ENST00000359031 DDIT3P35638 169 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 TSHZ3Q63HK5 1081 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 IL1RAPL2Q9NP60 686 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 PLCH1Q4KWH8 1693 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 NUP188Q5SRE5 1749 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 ERVV-2B6SEH9 535 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 IL2RBP14784 551 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 AIMP1Q12904 312 aaKnown RBP18.23■□□□□ 0.51
GABPB1-202ENST00000359031 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
GABPB1-202ENST00000359031 LRP10Q7Z4F1 713 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 SPRYD3Q8NCJ5 442 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 XAGE3Q8WTP9 111 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 ESYT1Q9BSJ8 1104 aa18.23■□□□□ 0.51
GABPB1-202ENST00000359031 METTL22Q9BUU2 404 aaPredicted RBP18.23■□□□□ 0.51
GABPB1-202ENST00000359031 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
GABPB1-202ENST00000359031 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
GABPB1-202ENST00000359031 NEURL1BA8MQ27 555 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 TRIM6-TRIM34B2RNG4 842 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 EPB41L2O43491 1005 aaKnown RBP18.21■□□□□ 0.51
GABPB1-202ENST00000359031 IGKV5-2P06315 115 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 MYL6BP14649 208 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 CHMLP26374 656 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 OS9Q13438 667 aaPredicted RBP18.21■□□□□ 0.51
GABPB1-202ENST00000359031 COPS6Q7L5N1 327 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 TTC41PQ6P2S7 1318 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 COL15A1P39059 1388 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 TNS2Q63HR2 1409 aa18.21■□□□□ 0.51
GABPB1-202ENST00000359031 NWD2Q9ULI1 1742 aa18.2■□□□□ 0.5
GABPB1-202ENST00000359031 CD2BP2O95400 341 aaKnown RBP18.2■□□□□ 0.5
GABPB1-202ENST00000359031 NUTM1Q86Y26 1132 aa18.2■□□□□ 0.5
GABPB1-202ENST00000359031 PI4K2BQ8TCG2 481 aa18.2■□□□□ 0.5
GABPB1-202ENST00000359031 RILPL2Q969X0 211 aa18.2■□□□□ 0.5
GABPB1-202ENST00000359031 SUCLG2Q96I99 432 aa18.2■□□□□ 0.5
GABPB1-202ENST00000359031 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
GABPB1-202ENST00000359031 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
GABPB1-202ENST00000359031 MCCP23508 829 aa18.19■□□□□ 0.5
GABPB1-202ENST00000359031 GCKRQ14397 625 aa18.19■□□□□ 0.5
GABPB1-202ENST00000359031 GSE1Q14687 1217 aa18.19■□□□□ 0.5
GABPB1-202ENST00000359031 ANKRD13DQ6ZTN6 518 aa18.19■□□□□ 0.5
GABPB1-202ENST00000359031 CLASRPQ8N2M8 674 aaKnown RBP18.19■□□□□ 0.5
GABPB1-202ENST00000359031 WNK3Q9BYP7 1800 aa18.18■□□□□ 0.5
GABPB1-202ENST00000359031 FAM98CQ17RN3 349 aaKnown RBP18.18■□□□□ 0.5
GABPB1-202ENST00000359031 KAZALD1Q96I82 304 aa18.18■□□□□ 0.5
GABPB1-202ENST00000359031 MYD88Q99836 296 aa18.18■□□□□ 0.5
GABPB1-202ENST00000359031 BICC1Q9H694 974 aaKnown RBP18.18■□□□□ 0.5
GABPB1-202ENST00000359031 ST18O60284 1047 aa18.17■□□□□ 0.5
GABPB1-202ENST00000359031 ONECUT3O60422 494 aaPredicted RBP18.17■□□□□ 0.5
GABPB1-202ENST00000359031 GLRX3O76003 335 aaKnown RBP18.17■□□□□ 0.5
GABPB1-202ENST00000359031 HSP90AA1P07900 732 aaKnown RBP18.17■□□□□ 0.5
GABPB1-202ENST00000359031 CNTROBQ8N137 903 aa18.17■□□□□ 0.5
GABPB1-202ENST00000359031 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
GABPB1-202ENST00000359031 EVA1CP58658 441 aa18.16■□□□□ 0.5
GABPB1-202ENST00000359031 ANAPC15P60006 121 aa18.16■□□□□ 0.5
GABPB1-202ENST00000359031 TJP1Q07157 1748 aa18.16■□□□□ 0.5
GABPB1-202ENST00000359031 PLBD2Q8NHP8 589 aa18.16■□□□□ 0.5
GABPB1-202ENST00000359031 IL17RAQ96F46 866 aa18.16■□□□□ 0.5
GABPB1-202ENST00000359031 STRN4Q9NRL3 753 aa18.16■□□□□ 0.5
GABPB1-202ENST00000359031 MCM4P33991 863 aa18.15■□□□□ 0.5
GABPB1-202ENST00000359031 IL27Q8NEV9 243 aa18.15■□□□□ 0.5
GABPB1-202ENST00000359031 ECHDC1Q9NTX5 307 aa18.14■□□□□ 0.49
GABPB1-202ENST00000359031 BTG4Q9NY30 223 aa18.14■□□□□ 0.49
GABPB1-202ENST00000359031 IFIT2P09913 472 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 907.9 ms