RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 GRPEL1Q9HAV7 217 aa27.49■■□□□ 1.99
POLR2J2-202ENST00000358438 SPATA31A5Q5VU36 1347 aa27.49■■□□□ 1.99
POLR2J2-202ENST00000358438 SPATA31A7Q8IWB4 1347 aa27.49■■□□□ 1.99
POLR2J2-202ENST00000358438 PTCD1O75127 700 aaKnown RBP27.48■■□□□ 1.99
POLR2J2-202ENST00000358438 XAGE3Q8WTP9 111 aa27.48■■□□□ 1.99
POLR2J2-202ENST00000358438 ALDH1L1O75891 902 aa27.48■■□□□ 1.99
POLR2J2-202ENST00000358438 COPS6Q7L5N1 327 aa27.48■■□□□ 1.99
POLR2J2-202ENST00000358438 PIGBQ92521 554 aa27.47■■□□□ 1.99
POLR2J2-202ENST00000358438 ERBB4Q15303 1308 aa27.47■■□□□ 1.99
POLR2J2-202ENST00000358438 NBPF7P0C2Y1 421 aaPredicted RBP27.47■■□□□ 1.99
POLR2J2-202ENST00000358438 ATP8B2P98198 1209 aa27.47■■□□□ 1.99
POLR2J2-202ENST00000358438 PIP4K2AP48426 406 aaPredicted RBP27.46■■□□□ 1.99
POLR2J2-202ENST00000358438 RIC3Q7Z5B4 369 aa27.45■■□□□ 1.99
POLR2J2-202ENST00000358438 LINS1Q8NG48 757 aa27.45■■□□□ 1.99
POLR2J2-202ENST00000358438 PNMA6EA0A0J9YXQ4 647 aa27.44■■□□□ 1.98
POLR2J2-202ENST00000358438 PTMSP20962 102 aa27.44■■□□□ 1.98
POLR2J2-202ENST00000358438 DDB1Q16531 1140 aa27.44■■□□□ 1.98
POLR2J2-202ENST00000358438 CWF19L2Q2TBE0 894 aaKnown RBP27.44■■□□□ 1.98
POLR2J2-202ENST00000358438 ASAP1Q9ULH1 1129 aa27.44■■□□□ 1.98
POLR2J2-202ENST00000358438 CCDC9Q9Y3X0 531 aaKnown RBP27.44■■□□□ 1.98
POLR2J2-202ENST00000358438 BCL9O00512 1426 aa27.43■■□□□ 1.98
POLR2J2-202ENST00000358438 BARGINQ6ZT62 677 aa27.42■■□□□ 1.98
POLR2J2-202ENST00000358438 ANKRD13DQ6ZTN6 518 aa27.42■■□□□ 1.98
POLR2J2-202ENST00000358438 UNC5CLQ8IV45 518 aa27.42■■□□□ 1.98
POLR2J2-202ENST00000358438 DOT1LQ8TEK3 1739 aa27.41■■□□□ 1.98
POLR2J2-202ENST00000358438 NBPF26B4DH59 902 aa27.41■■□□□ 1.98
POLR2J2-202ENST00000358438 NBPF14Q5TI25 921 aa27.41■■□□□ 1.98
POLR2J2-202ENST00000358438 NBPF10Q6P3W6 841 aaKnown RBP27.41■■□□□ 1.98
POLR2J2-202ENST00000358438 NBPF15Q8N660 670 aa27.41■■□□□ 1.98
POLR2J2-202ENST00000358438 PDCL3Q9H2J4 239 aa27.41■■□□□ 1.98
POLR2J2-202ENST00000358438 ATG3Q9NT62 314 aa27.41■■□□□ 1.98
POLR2J2-202ENST00000358438 C9orf78Q9NZ63 289 aaPredicted RBP27.41■■□□□ 1.98
POLR2J2-202ENST00000358438 KAT6BQ8WYB5 2073 aa27.4■■□□□ 1.98
POLR2J2-202ENST00000358438 ARFGEF2Q9Y6D5 1785 aa27.4■■□□□ 1.98
POLR2J2-202ENST00000358438 NEXNQ0ZGT2 675 aa27.4■■□□□ 1.98
POLR2J2-202ENST00000358438 METTL22Q9BUU2 404 aaPredicted RBP27.4■■□□□ 1.98
POLR2J2-202ENST00000358438 IBTKQ9P2D0 1353 aaPredicted RBP27.39■■□□□ 1.98
POLR2J2-202ENST00000358438 TRIM44Q96DX7 344 aaPredicted RBP27.39■■□□□ 1.98
POLR2J2-202ENST00000358438 GZF1Q9H116 711 aaPredicted RBP27.39■■□□□ 1.98
POLR2J2-202ENST00000358438 BCL9LQ86UU0 1499 aa27.39■■□□□ 1.98
POLR2J2-202ENST00000358438 APBB1O00213 710 aa27.39■■□□□ 1.97
POLR2J2-202ENST00000358438 IGKV5-2P06315 115 aa27.39■■□□□ 1.97
POLR2J2-202ENST00000358438 SSH3Q8TE77 659 aa27.39■■□□□ 1.97
POLR2J2-202ENST00000358438 AFF2P51816 1311 aa27.38■■□□□ 1.97
POLR2J2-202ENST00000358438 A1BGP04217 495 aa27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 PPP1R42Q7Z4L9 355 aa27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 USP21Q9UK80 565 aa27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 EXOC6BQ9Y2D4 811 aa27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 UTYO14607 1347 aa27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 GRM8O00222 908 aa27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 SKOR2Q2VWA4 1001 aaPredicted RBP27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 BMP2KLQ5H9B9 411 aa27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 SYTL4Q96C24 671 aaPredicted RBP27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 HDAC5Q9UQL6 1122 aa27.37■■□□□ 1.97
POLR2J2-202ENST00000358438 FNBP4Q8N3X1 1017 aaPredicted RBP27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 NEURL1BA8MQ27 555 aa27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 SMARCA5O60264 1052 aaPredicted RBP27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 POLA2Q14181 598 aa27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 PLEKHM2Q8IWE5 1019 aa27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 PLBD2Q8NHP8 589 aa27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 MYD88Q99836 296 aa27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 TEX13AQ9BXU3 409 aaPredicted RBP27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 C22orf23Q9BZE7 217 aa27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 CIZ1Q9ULV3 898 aaPredicted RBP27.36■■□□□ 1.97
POLR2J2-202ENST00000358438 SRGAP3O43295 1099 aa27.34■■□□□ 1.97
POLR2J2-202ENST00000358438 PRIM1P49642 420 aaKnown RBP27.34■■□□□ 1.97
POLR2J2-202ENST00000358438 TERF1P54274 439 aa27.34■■□□□ 1.97
POLR2J2-202ENST00000358438 VPS72Q15906 364 aa27.34■■□□□ 1.97
POLR2J2-202ENST00000358438 C16orf71Q8IYS4 520 aaPredicted RBP27.34■■□□□ 1.97
POLR2J2-202ENST00000358438 MARCH10Q8NA82 808 aaPredicted RBP27.34■■□□□ 1.97
POLR2J2-202ENST00000358438 ARXQ96QS3 562 aa27.34■■□□□ 1.97
POLR2J2-202ENST00000358438 RBM42Q9BTD8 480 aaKnown RBP27.34■■□□□ 1.97
POLR2J2-202ENST00000358438 AFDNP55196 1824 aaKnown RBP27.33■■□□□ 1.97
POLR2J2-202ENST00000358438 MTX1Q13505 466 aa27.33■■□□□ 1.97
POLR2J2-202ENST00000358438 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.97
POLR2J2-202ENST00000358438 DDIT3P35638 169 aa27.32■■□□□ 1.96
POLR2J2-202ENST00000358438 GCKRQ14397 625 aa27.32■■□□□ 1.96
POLR2J2-202ENST00000358438 HSCBQ8IWL3 235 aa27.32■■□□□ 1.96
POLR2J2-202ENST00000358438 DNAJC10Q8IXB1 793 aa27.32■■□□□ 1.96
POLR2J2-202ENST00000358438 LRRCC1Q9C099 1032 aa27.32■■□□□ 1.96
POLR2J2-202ENST00000358438 OTUD7AQ8TE49 926 aaPredicted RBP27.31■■□□□ 1.96
POLR2J2-202ENST00000358438 FAM98CQ17RN3 349 aaKnown RBP27.3■■□□□ 1.96
POLR2J2-202ENST00000358438 TTLL7Q6ZT98 887 aa27.3■■□□□ 1.96
POLR2J2-202ENST00000358438 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.3■■□□□ 1.96
POLR2J2-202ENST00000358438 STARD3NLO95772 234 aa27.29■■□□□ 1.96
POLR2J2-202ENST00000358438 SNX21Q969T3 373 aa27.29■■□□□ 1.96
POLR2J2-202ENST00000358438 SUCLG2Q96I99 432 aa27.29■■□□□ 1.96
POLR2J2-202ENST00000358438 KAZALD1Q96I82 304 aa27.28■■□□□ 1.96
POLR2J2-202ENST00000358438 GBP4Q96PP9 640 aa27.28■■□□□ 1.96
POLR2J2-202ENST00000358438 SLC4A9Q96Q91 983 aa27.28■■□□□ 1.96
POLR2J2-202ENST00000358438 SURF6O75683 361 aaKnown RBP27.27■■□□□ 1.96
POLR2J2-202ENST00000358438 CCDC173Q0VFZ6 552 aa27.27■■□□□ 1.96
POLR2J2-202ENST00000358438 ATP5J2-PTCD1G3V325 749 aa27.26■■□□□ 1.95
POLR2J2-202ENST00000358438 RAB11FIP3O75154 756 aa27.26■■□□□ 1.95
POLR2J2-202ENST00000358438 GSPT1P15170 499 aaKnown RBP27.26■■□□□ 1.95
POLR2J2-202ENST00000358438 TTC22Q5TAA0 569 aa27.26■■□□□ 1.95
POLR2J2-202ENST00000358438 ACSBG1Q96GR2 724 aa27.26■■□□□ 1.95
POLR2J2-202ENST00000358438 BICC1Q9H694 974 aaKnown RBP27.26■■□□□ 1.95
POLR2J2-202ENST00000358438 PPP1R9BQ96SB3 815 aa27.25■■□□□ 1.95
POLR2J2-202ENST00000358438 TJP1Q07157 1748 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms