RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 LINS1Q8NG48 757 aa13.81□□□□□ -0.2
ABCD4-201ENST00000356924 IBTKQ9P2D0 1353 aaPredicted RBP13.81□□□□□ -0.2
ABCD4-201ENST00000356924 HMMRO75330 724 aa13.81□□□□□ -0.2
ABCD4-201ENST00000356924 IGKV5-2P06315 115 aa13.81□□□□□ -0.2
ABCD4-201ENST00000356924 PRIM1P49642 420 aaKnown RBP13.81□□□□□ -0.2
ABCD4-201ENST00000356924 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
ABCD4-201ENST00000356924 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
ABCD4-201ENST00000356924 GLIPR1L2Q4G1C9 344 aa13.8□□□□□ -0.2
ABCD4-201ENST00000356924 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
ABCD4-201ENST00000356924 ANKRD13DQ6ZTN6 518 aa13.8□□□□□ -0.2
ABCD4-201ENST00000356924 FAM43AQ8N2R8 423 aa13.8□□□□□ -0.2
ABCD4-201ENST00000356924 SLC4A9Q96Q91 983 aa13.8□□□□□ -0.2
ABCD4-201ENST00000356924 THSD7AQ9UPZ6 1657 aa13.8□□□□□ -0.2
ABCD4-201ENST00000356924 UTYO14607 1347 aa13.8□□□□□ -0.2
ABCD4-201ENST00000356924 FAM98CQ17RN3 349 aaKnown RBP13.8□□□□□ -0.2
ABCD4-201ENST00000356924 DNAJC10Q8IXB1 793 aa13.8□□□□□ -0.2
ABCD4-201ENST00000356924 DAXXQ9UER7 740 aaPredicted RBP13.79□□□□□ -0.2
ABCD4-201ENST00000356924 SSH3Q8TE77 659 aa13.79□□□□□ -0.2
ABCD4-201ENST00000356924 MYD88Q99836 296 aa13.79□□□□□ -0.2
ABCD4-201ENST00000356924 USP21Q9UK80 565 aa13.79□□□□□ -0.2
ABCD4-201ENST00000356924 NEURL1BA8MQ27 555 aa13.78□□□□□ -0.2
ABCD4-201ENST00000356924 POLA2Q14181 598 aa13.78□□□□□ -0.2
ABCD4-201ENST00000356924 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
ABCD4-201ENST00000356924 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
ABCD4-201ENST00000356924 TTLL7Q6ZT98 887 aa13.78□□□□□ -0.2
ABCD4-201ENST00000356924 SYTL4Q96C24 671 aaPredicted RBP13.78□□□□□ -0.2
ABCD4-201ENST00000356924 TEX13AQ9BXU3 409 aaPredicted RBP13.78□□□□□ -0.2
ABCD4-201ENST00000356924 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
ABCD4-201ENST00000356924 GRM8O00222 908 aa13.77□□□□□ -0.21
ABCD4-201ENST00000356924 PPP1R42Q7Z4L9 355 aa13.77□□□□□ -0.21
ABCD4-201ENST00000356924 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.21
ABCD4-201ENST00000356924 C9orf78Q9NZ63 289 aaPredicted RBP13.77□□□□□ -0.21
ABCD4-201ENST00000356924 SMARCA5O60264 1052 aaPredicted RBP13.77□□□□□ -0.21
ABCD4-201ENST00000356924 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.21
ABCD4-201ENST00000356924 NEXNQ0ZGT2 675 aa13.76□□□□□ -0.21
ABCD4-201ENST00000356924 GCKRQ14397 625 aa13.76□□□□□ -0.21
ABCD4-201ENST00000356924 KAZALD1Q96I82 304 aa13.76□□□□□ -0.21
ABCD4-201ENST00000356924 EXOC6BQ9Y2D4 811 aa13.76□□□□□ -0.21
ABCD4-201ENST00000356924 CICQ96RK0 1608 aaPredicted RBP13.76□□□□□ -0.21
ABCD4-201ENST00000356924 PLEKHM2Q8IWE5 1019 aa13.76□□□□□ -0.21
ABCD4-201ENST00000356924 SUCLG2Q96I99 432 aa13.76□□□□□ -0.21
ABCD4-201ENST00000356924 MTX1Q13505 466 aa13.75□□□□□ -0.21
ABCD4-201ENST00000356924 CYP19A1P11511 503 aaPredicted RBP13.75□□□□□ -0.21
ABCD4-201ENST00000356924 APBB1O00213 710 aa13.74□□□□□ -0.21
ABCD4-201ENST00000356924 SEC24BO95487 1268 aa13.74□□□□□ -0.21
ABCD4-201ENST00000356924 MEX3CQ5U5Q3 659 aaKnown RBP13.74□□□□□ -0.21
ABCD4-201ENST00000356924 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
ABCD4-201ENST00000356924 ATRNO75882 1429 aa13.74□□□□□ -0.21
ABCD4-201ENST00000356924 RREB1Q92766 1687 aa13.74□□□□□ -0.21
ABCD4-201ENST00000356924 AFF2P51816 1311 aa13.74□□□□□ -0.21
ABCD4-201ENST00000356924 STARD3NLO95772 234 aa13.74□□□□□ -0.21
ABCD4-201ENST00000356924 ATP5J2-PTCD1G3V325 749 aa13.73□□□□□ -0.21
ABCD4-201ENST00000356924 SRGAP3O43295 1099 aa13.73□□□□□ -0.21
ABCD4-201ENST00000356924 KCNQ2O43526 872 aa13.72□□□□□ -0.21
ABCD4-201ENST00000356924 BMP2KLQ5H9B9 411 aa13.72□□□□□ -0.21
ABCD4-201ENST00000356924 BICC1Q9H694 974 aaKnown RBP13.72□□□□□ -0.21
ABCD4-201ENST00000356924 HDAC5Q9UQL6 1122 aa13.72□□□□□ -0.21
ABCD4-201ENST00000356924 CASP7P55210 303 aa13.72□□□□□ -0.21
ABCD4-201ENST00000356924 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
ABCD4-201ENST00000356924 COL15A1P39059 1388 aa13.72□□□□□ -0.21
ABCD4-201ENST00000356924 SALL3Q9BXA9 1300 aa13.72□□□□□ -0.21
ABCD4-201ENST00000356924 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
ABCD4-201ENST00000356924 LRRCC1Q9C099 1032 aa13.72□□□□□ -0.21
ABCD4-201ENST00000356924 ZNF831Q5JPB2 1677 aa13.71□□□□□ -0.21
ABCD4-201ENST00000356924 EPHA10Q5JZY3 1008 aa13.71□□□□□ -0.21
ABCD4-201ENST00000356924 TUBGCP6Q96RT7 1819 aa13.71□□□□□ -0.22
ABCD4-201ENST00000356924 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.22
ABCD4-201ENST00000356924 JARID2Q92833 1246 aaPredicted RBP13.71□□□□□ -0.22
ABCD4-201ENST00000356924 ZBTB1Q9Y2K1 713 aa13.71□□□□□ -0.22
ABCD4-201ENST00000356924 NHSQ6T4R5 1651 aa13.71□□□□□ -0.22
ABCD4-201ENST00000356924 COL5A3P25940 1745 aaPredicted RBP13.7□□□□□ -0.22
ABCD4-201ENST00000356924 A0A0G2JS52 829 aa13.7□□□□□ -0.22
ABCD4-201ENST00000356924 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
ABCD4-201ENST00000356924 SURF6O75683 361 aaKnown RBP13.7□□□□□ -0.22
ABCD4-201ENST00000356924 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
ABCD4-201ENST00000356924 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
ABCD4-201ENST00000356924 ISCA1Q9BUE6 129 aa13.7□□□□□ -0.22
ABCD4-201ENST00000356924 H7C1W4 665 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 ANKRD36CQ5JPF3 1778 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 A0A087WZG4 1122 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 LOC102724428A0A0B4J2F2 783 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 SIK1P57059 783 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 ITPK1Q13572 414 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 BTAF1O14981 1849 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 ONECUT3O60422 494 aaPredicted RBP13.69□□□□□ -0.22
ABCD4-201ENST00000356924 INTS5Q6P9B9 1019 aaKnown RBP13.69□□□□□ -0.22
ABCD4-201ENST00000356924 UBE3BQ7Z3V4 1068 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
ABCD4-201ENST00000356924 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
ABCD4-201ENST00000356924 ZNF330Q9Y3S2 320 aaPredicted RBP13.69□□□□□ -0.22
ABCD4-201ENST00000356924 MAP3K15Q6ZN16 1313 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 TCIRG1Q13488 830 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 KIF6Q6ZMV9 814 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
ABCD4-201ENST00000356924 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
ABCD4-201ENST00000356924 SBF2Q86WG5 1849 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 NUP98P52948 1817 aa13.68□□□□□ -0.22
ABCD4-201ENST00000356924 RABL6Q3YEC7 729 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms